RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 OS9Q13438 667 aaPredicted RBP18.13■□□□□ 0.49
VPS36-207ENST00000611132 GGT6Q6P531 493 aa18.13■□□□□ 0.49
VPS36-207ENST00000611132 FOXD4L5Q5VV16 416 aaPredicted RBP18.12■□□□□ 0.49
VPS36-207ENST00000611132 FOXD4L4Q8WXT5 416 aaPredicted RBP18.12■□□□□ 0.49
VPS36-207ENST00000611132 NASPP49321 788 aaPredicted RBP18.12■□□□□ 0.49
VPS36-207ENST00000611132 HMMRO75330 724 aa18.12■□□□□ 0.49
VPS36-207ENST00000611132 HECW1Q76N89 1606 aa18.12■□□□□ 0.49
VPS36-207ENST00000611132 PRDM2Q13029 1718 aa18.11■□□□□ 0.49
VPS36-207ENST00000611132 NINLQ9Y2I6 1382 aa18.11■□□□□ 0.49
VPS36-207ENST00000611132 SLFN5Q08AF3 891 aa18.11■□□□□ 0.49
VPS36-207ENST00000611132 PKNOX2Q96KN3 472 aa18.11■□□□□ 0.49
VPS36-207ENST00000611132 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
VPS36-207ENST00000611132 NRDCO43847 1150 aa18.11■□□□□ 0.49
VPS36-207ENST00000611132 TPM2P07951 284 aa18.11■□□□□ 0.49
VPS36-207ENST00000611132 TCP11L2Q8N4U5 519 aa18.11■□□□□ 0.49
VPS36-207ENST00000611132 NUCB2P80303 420 aa18.1■□□□□ 0.49
VPS36-207ENST00000611132 KIAA1211Q6ZU35 1233 aa18.1■□□□□ 0.49
VPS36-207ENST00000611132 CSPP1Q1MSJ5 1256 aa18.09■□□□□ 0.49
VPS36-207ENST00000611132 GRPEL1Q9HAV7 217 aa18.09■□□□□ 0.49
VPS36-207ENST00000611132 NOL8Q76FK4 1167 aaKnown RBP18.09■□□□□ 0.49
VPS36-207ENST00000611132 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.49
VPS36-207ENST00000611132 KIF16BQ96L93 1317 aa18.08■□□□□ 0.49
VPS36-207ENST00000611132 ERBINQ96RT1 1412 aa18.08■□□□□ 0.48
VPS36-207ENST00000611132 PLEKHH2Q8IVE3 1493 aa18.08■□□□□ 0.48
VPS36-207ENST00000611132 ESPNB1AK53 854 aa18.08■□□□□ 0.48
VPS36-207ENST00000611132 ELL2O00472 640 aaPredicted RBP18.08■□□□□ 0.48
VPS36-207ENST00000611132 TOPBP1Q92547 1522 aa18.07■□□□□ 0.48
VPS36-207ENST00000611132 TRIM6-TRIM34B2RNG4 842 aa18.06■□□□□ 0.48
VPS36-207ENST00000611132 FGD1P98174 961 aa18.06■□□□□ 0.48
VPS36-207ENST00000611132 LMOD3Q0VAK6 560 aa18.06■□□□□ 0.48
VPS36-207ENST00000611132 RRP9O43818 475 aaKnown RBP18.06■□□□□ 0.48
VPS36-207ENST00000611132 MCTP1Q6DN14 999 aa18.06■□□□□ 0.48
VPS36-207ENST00000611132 C9orf84Q5VXU9 1444 aa18.06■□□□□ 0.48
VPS36-207ENST00000611132 MAP7D2Q96T17 732 aa18.05■□□□□ 0.48
VPS36-207ENST00000611132 ABCC5O15440 1437 aa18.05■□□□□ 0.48
VPS36-207ENST00000611132 RTF1Q92541 710 aaKnown RBP18.05■□□□□ 0.48
VPS36-207ENST00000611132 REC8O95072 547 aa18.04■□□□□ 0.48
VPS36-207ENST00000611132 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
VPS36-207ENST00000611132 R3HCC1Q9Y3T6 440 aaKnown RBP18.04■□□□□ 0.48
VPS36-207ENST00000611132 CDK13Q14004 1512 aaKnown RBP18.04■□□□□ 0.48
VPS36-207ENST00000611132 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
VPS36-207ENST00000611132 CCDC173Q0VFZ6 552 aa18.04■□□□□ 0.48
VPS36-207ENST00000611132 RIPK4P57078 832 aa18.04■□□□□ 0.48
VPS36-207ENST00000611132 ABCA10Q8WWZ4 1543 aa18.04■□□□□ 0.48
VPS36-207ENST00000611132 UBE2Q2Q8WVN8 375 aa18.03■□□□□ 0.48
VPS36-207ENST00000611132 PRG4Q92954 1404 aaPredicted RBP18.03■□□□□ 0.48
VPS36-207ENST00000611132 EVC2Q86UK5 1308 aa18.03■□□□□ 0.48
VPS36-207ENST00000611132 DUSP27Q5VZP5 1158 aa18.03■□□□□ 0.48
VPS36-207ENST00000611132 C14orf37Q86TY3 774 aa18.03■□□□□ 0.48
VPS36-207ENST00000611132 PTPRGP23470 1445 aa18.02■□□□□ 0.47
VPS36-207ENST00000611132 MTHFSP49914 203 aa18.02■□□□□ 0.47
VPS36-207ENST00000611132 SLC4A10Q6U841 1118 aa18■□□□□ 0.47
VPS36-207ENST00000611132 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
VPS36-207ENST00000611132 CDC45O75419 566 aa18■□□□□ 0.47
VPS36-207ENST00000611132 FOXD4L6Q3SYB3 417 aaPredicted RBP18■□□□□ 0.47
VPS36-207ENST00000611132 FOXD4L3Q6VB84 417 aaPredicted RBP18■□□□□ 0.47
VPS36-207ENST00000611132 CIZ1Q9ULV3 898 aaPredicted RBP17.99■□□□□ 0.47
VPS36-207ENST00000611132 MTERF4Q7Z6M4 381 aaKnown RBP17.99■□□□□ 0.47
VPS36-207ENST00000611132 API5Q9BZZ5 524 aaKnown RBP17.99■□□□□ 0.47
VPS36-207ENST00000611132 SOX12O15370 315 aa17.99■□□□□ 0.47
VPS36-207ENST00000611132 NUTM2DQ5VT03 806 aaPredicted RBP17.99■□□□□ 0.47
VPS36-207ENST00000611132 STK31Q9BXU1 1019 aa17.99■□□□□ 0.47
VPS36-207ENST00000611132 MVPQ14764 893 aaKnown RBP17.99■□□□□ 0.47
VPS36-207ENST00000611132 CAVIN1Q6NZI2 390 aaKnown RBP17.99■□□□□ 0.47
VPS36-207ENST00000611132 DNMBPQ6XZF7 1577 aa17.98■□□□□ 0.47
VPS36-207ENST00000611132 DIAPH1O60610 1272 aaKnown RBP17.98■□□□□ 0.47
VPS36-207ENST00000611132 INTS3Q68E01 1043 aaKnown RBP17.98■□□□□ 0.47
VPS36-207ENST00000611132 WDR63Q8IWG1 891 aa17.98■□□□□ 0.47
VPS36-207ENST00000611132 TBC1D2Q9BYX2 928 aa17.98■□□□□ 0.47
VPS36-207ENST00000611132 EXOSC9Q06265 439 aaKnown RBP17.97■□□□□ 0.47
VPS36-207ENST00000611132 LRPPRCP42704 1394 aaKnown RBP17.97■□□□□ 0.47
VPS36-207ENST00000611132 SCAPERQ9BY12 1400 aa17.97■□□□□ 0.47
VPS36-207ENST00000611132 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
VPS36-207ENST00000611132 WWC1Q8IX03 1113 aa17.97■□□□□ 0.47
VPS36-207ENST00000611132 NKTRP30414 1462 aaKnown RBP17.96■□□□□ 0.47
VPS36-207ENST00000611132 CUL7Q14999 1698 aa17.96■□□□□ 0.47
VPS36-207ENST00000611132 CCDC39Q9UFE4 941 aa17.96■□□□□ 0.47
VPS36-207ENST00000611132 C8orf34Q49A92 452 aa17.95■□□□□ 0.46
VPS36-207ENST00000611132 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.95■□□□□ 0.46
VPS36-207ENST00000611132 ATP6V1DQ9Y5K8 247 aa17.95■□□□□ 0.46
VPS36-207ENST00000611132 NAP1L2Q9ULW6 460 aaPredicted RBP17.95■□□□□ 0.46
VPS36-207ENST00000611132 HTATSF1O43719 755 aaKnown RBP17.95■□□□□ 0.46
VPS36-207ENST00000611132 CFAP70Q5T0N1 1121 aa17.95■□□□□ 0.46
VPS36-207ENST00000611132 DHX29Q7Z478 1369 aaKnown RBP17.95■□□□□ 0.46
VPS36-207ENST00000611132 RILPL2Q969X0 211 aa17.94■□□□□ 0.46
VPS36-207ENST00000611132 GRIN2BQ13224 1484 aa17.94■□□□□ 0.46
VPS36-207ENST00000611132 CT47B1P0C2W7 299 aaPredicted RBP17.93■□□□□ 0.46
VPS36-207ENST00000611132 K7ELQ4 463 aaPredicted RBP17.93■□□□□ 0.46
VPS36-207ENST00000611132 RBM10P98175 930 aaKnown RBP17.93■□□□□ 0.46
VPS36-207ENST00000611132 RABEP1Q15276 862 aa17.93■□□□□ 0.46
VPS36-207ENST00000611132 RNF214Q8ND24 703 aa17.92■□□□□ 0.46
VPS36-207ENST00000611132 TSR2Q969E8 191 aaKnown RBP17.92■□□□□ 0.46
VPS36-207ENST00000611132 CFAP43Q8NDM7 1665 aa17.92■□□□□ 0.46
VPS36-207ENST00000611132 ATF7IPQ6VMQ6 1270 aa17.92■□□□□ 0.46
VPS36-207ENST00000611132 VGFO15240 615 aaPredicted RBP17.91■□□□□ 0.46
VPS36-207ENST00000611132 IGHDP01880 384 aa17.91■□□□□ 0.46
VPS36-207ENST00000611132 GCC1Q96CN9 775 aa17.91■□□□□ 0.46
VPS36-207ENST00000611132 NESP48681 1621 aa17.91■□□□□ 0.46
VPS36-207ENST00000611132 PRPF40AO75400 957 aaKnown RBP17.91■□□□□ 0.46
VPS36-207ENST00000611132 MBD3O95983 291 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms