RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 NPDC1Q9NQX5 325 aaPredicted RBP13.63□□□□□ -0.23
FAM228B-205ENST00000611127 TTC13Q8NBP0 860 aa13.62□□□□□ -0.23
FAM228B-205ENST00000611127 TATDN2Q93075 761 aa13.61□□□□□ -0.23
FAM228B-205ENST00000611127 LRCH3Q96II8 777 aa13.61□□□□□ -0.23
FAM228B-205ENST00000611127 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.61□□□□□ -0.23
FAM228B-205ENST00000611127 ZNF608Q9ULD9 1512 aaPredicted RBP13.6□□□□□ -0.23
FAM228B-205ENST00000611127 SEMA3EO15041 775 aa13.6□□□□□ -0.23
FAM228B-205ENST00000611127 IFFO2Q5TF58 517 aa13.59□□□□□ -0.23
FAM228B-205ENST00000611127 FAM198AQ9UFP1 575 aa13.59□□□□□ -0.23
FAM228B-205ENST00000611127 BCAMP50895 628 aa13.58□□□□□ -0.24
FAM228B-205ENST00000611127 PNMA3Q9UL41 463 aa13.58□□□□□ -0.24
FAM228B-205ENST00000611127 KDM2AQ9Y2K7 1162 aa13.58□□□□□ -0.24
FAM228B-205ENST00000611127 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
FAM228B-205ENST00000611127 TESPA1A2RU30 521 aaPredicted RBP13.57□□□□□ -0.24
FAM228B-205ENST00000611127 PTGDRQ13258 359 aa13.57□□□□□ -0.24
FAM228B-205ENST00000611127 TSR3Q9UJK0 312 aaKnown RBP13.57□□□□□ -0.24
FAM228B-205ENST00000611127 SOGA1O94964 1423 aa13.56□□□□□ -0.24
FAM228B-205ENST00000611127 HDGFP51858 240 aaKnown RBP13.56□□□□□ -0.24
FAM228B-205ENST00000611127 PADI6Q6TGC4 694 aa13.56□□□□□ -0.24
FAM228B-205ENST00000611127 NUTM2FA1L443 756 aa13.54□□□□□ -0.24
FAM228B-205ENST00000611127 NUDT18Q6ZVK8 323 aa13.54□□□□□ -0.24
FAM228B-205ENST00000611127 AQRO60306 1485 aaKnown RBP eCLIP13.54□□□□□ -0.24
FAM228B-205ENST00000611127 NECTIN2Q92692 538 aa13.53□□□□□ -0.24
FAM228B-205ENST00000611127 SMAPO00193 183 aa13.52□□□□□ -0.25
FAM228B-205ENST00000611127 FCHSD2O94868 740 aa13.52□□□□□ -0.25
FAM228B-205ENST00000611127 HPS5Q9UPZ3 1129 aa13.52□□□□□ -0.25
FAM228B-205ENST00000611127 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.25
FAM228B-205ENST00000611127 TARBP1Q13395 1621 aaKnown RBP13.52□□□□□ -0.25
FAM228B-205ENST00000611127 CUX1P39880 1505 aa13.51□□□□□ -0.25
FAM228B-205ENST00000611127 FGD5Q6ZNL6 1462 aa13.51□□□□□ -0.25
FAM228B-205ENST00000611127 WBP1LQ9NX94 342 aa13.51□□□□□ -0.25
FAM228B-205ENST00000611127 TDRD9Q8NDG6 1382 aaKnown RBP13.5□□□□□ -0.25
FAM228B-205ENST00000611127 SAMD7Q7Z3H4 446 aa13.5□□□□□ -0.25
FAM228B-205ENST00000611127 SLC4A3P48751 1232 aa13.49□□□□□ -0.25
FAM228B-205ENST00000611127 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
FAM228B-205ENST00000611127 ITGBL1O95965 494 aaPredicted RBP13.48□□□□□ -0.25
FAM228B-205ENST00000611127 PPP4CP60510 307 aa13.48□□□□□ -0.25
FAM228B-205ENST00000611127 C3orf80F5H4A9 247 aa13.47□□□□□ -0.25
FAM228B-205ENST00000611127 RBM46Q8TBY0 533 aaKnown RBP13.46□□□□□ -0.25
FAM228B-205ENST00000611127 EYA1Q99502 592 aa13.46□□□□□ -0.25
FAM228B-205ENST00000611127 HIC1Q14526 733 aa13.45□□□□□ -0.26
FAM228B-205ENST00000611127 TULP1O00294 542 aaPredicted RBP13.43□□□□□ -0.26
FAM228B-205ENST00000611127 SLF2Q8IX21 1173 aa13.43□□□□□ -0.26
FAM228B-205ENST00000611127 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
FAM228B-205ENST00000611127 WRNQ14191 1432 aaPredicted RBP eCLIP13.41□□□□□ -0.26
FAM228B-205ENST00000611127 CHMP7Q8WUX9 453 aaPredicted RBP13.41□□□□□ -0.26
FAM228B-205ENST00000611127 ADGRG1Q9Y653 693 aa13.41□□□□□ -0.26
FAM228B-205ENST00000611127 RGS20O76081 388 aa13.4□□□□□ -0.26
FAM228B-205ENST00000611127 DNAJB2P25686 324 aa13.4□□□□□ -0.26
FAM228B-205ENST00000611127 RBM26Q5T8P6 1007 aaKnown RBP13.4□□□□□ -0.26
FAM228B-205ENST00000611127 GRIN2BQ13224 1484 aa13.4□□□□□ -0.26
FAM228B-205ENST00000611127 ABCA10Q8WWZ4 1543 aa13.39□□□□□ -0.27
FAM228B-205ENST00000611127 SNAPC4Q5SXM2 1469 aa13.38□□□□□ -0.27
FAM228B-205ENST00000611127 OATP04181 439 aa13.38□□□□□ -0.27
FAM228B-205ENST00000611127 KCNC4Q03721 635 aa13.38□□□□□ -0.27
FAM228B-205ENST00000611127 SWT1Q5T5J6 900 aaKnown RBP13.38□□□□□ -0.27
FAM228B-205ENST00000611127 GAPVD1Q14C86 1478 aa13.37□□□□□ -0.27
FAM228B-205ENST00000611127 MAGI1Q96QZ7 1491 aaPredicted RBP13.37□□□□□ -0.27
FAM228B-205ENST00000611127 A0A0G2JS52 829 aa13.37□□□□□ -0.27
FAM228B-205ENST00000611127 GNPATO15228 680 aa13.36□□□□□ -0.27
FAM228B-205ENST00000611127 RNF40O75150 1001 aa13.36□□□□□ -0.27
FAM228B-205ENST00000611127 PRR14Q9BWN1 585 aa13.36□□□□□ -0.27
FAM228B-205ENST00000611127 TMEM134Q9H6X4 195 aa13.35□□□□□ -0.27
FAM228B-205ENST00000611127 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.34□□□□□ -0.27
FAM228B-205ENST00000611127 TOP2BQ02880 1626 aa13.34□□□□□ -0.27
FAM228B-205ENST00000611127 SYNJ2O15056 1496 aa13.33□□□□□ -0.28
FAM228B-205ENST00000611127 GPIHBP1Q8IV16 184 aa13.32□□□□□ -0.28
FAM228B-205ENST00000611127 ARHGEF11O15085 1522 aa13.31□□□□□ -0.28
FAM228B-205ENST00000611127 RCCD1A6NED2 376 aa13.31□□□□□ -0.28
FAM228B-205ENST00000611127 SYNJ1O43426 1573 aa13.31□□□□□ -0.28
FAM228B-205ENST00000611127 GPR37O15354 613 aa13.3□□□□□ -0.28
FAM228B-205ENST00000611127 PXYLP1Q8TE99 480 aa13.3□□□□□ -0.28
FAM228B-205ENST00000611127 BIVM-ERCC5R4GMW8 1640 aa13.3□□□□□ -0.28
FAM228B-205ENST00000611127 RIMBP3CA6NJZ7 1639 aa13.29□□□□□ -0.28
FAM228B-205ENST00000611127 RIMBP3BA6NNM3 1639 aa13.29□□□□□ -0.28
FAM228B-205ENST00000611127 RIMBP3Q9UFD9 1639 aa13.29□□□□□ -0.28
FAM228B-205ENST00000611127 CYB5RLQ6IPT4 315 aa13.29□□□□□ -0.28
FAM228B-205ENST00000611127 IL21Q9HBE4 155 aa13.29□□□□□ -0.28
FAM228B-205ENST00000611127 CHD1O14646 1710 aa13.29□□□□□ -0.28
FAM228B-205ENST00000611127 ABCA5Q8WWZ7 1642 aa13.28□□□□□ -0.28
FAM228B-205ENST00000611127 TJAP1Q5JTD0 557 aa13.28□□□□□ -0.28
FAM228B-205ENST00000611127 METTL3Q86U44 580 aaKnown RBP13.28□□□□□ -0.28
FAM228B-205ENST00000611127 APLP1P51693 650 aa13.27□□□□□ -0.29
FAM228B-205ENST00000611127 MTRQ99707 1265 aa13.25□□□□□ -0.29
FAM228B-205ENST00000611127 FAM161AQ3B820 660 aa13.24□□□□□ -0.29
FAM228B-205ENST00000611127 RSPH4AQ5TD94 716 aa13.24□□□□□ -0.29
FAM228B-205ENST00000611127 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
FAM228B-205ENST00000611127 FHAD1B1AJZ9 1412 aa13.23□□□□□ -0.29
FAM228B-205ENST00000611127 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
FAM228B-205ENST00000611127 KMT5BQ4FZB7 885 aa13.22□□□□□ -0.29
FAM228B-205ENST00000611127 ERICH3Q5RHP9 1530 aa13.21□□□□□ -0.29
FAM228B-205ENST00000611127 GRIN2AQ12879 1464 aa13.21□□□□□ -0.3
FAM228B-205ENST00000611127 FECHP22830 423 aa13.2□□□□□ -0.3
FAM228B-205ENST00000611127 ARAP1Q96P48 1450 aa13.19□□□□□ -0.3
FAM228B-205ENST00000611127 PCDHB3Q9Y5E6 796 aa13.18□□□□□ -0.3
FAM228B-205ENST00000611127 ADAMTS12P58397 1594 aa13.17□□□□□ -0.3
FAM228B-205ENST00000611127 NUP160Q12769 1436 aa13.17□□□□□ -0.3
FAM228B-205ENST00000611127 KIF27Q86VH2 1401 aa13.16□□□□□ -0.3
FAM228B-205ENST00000611127 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
FAM228B-205ENST00000611127 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms