RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 FOXD1Q16676 465 aa24.57■■□□□ 1.52
LINC00240-203ENST00000606878 NUTM2DQ5VT03 806 aaPredicted RBP24.57■■□□□ 1.52
LINC00240-203ENST00000606878 TMEM131LA2VDJ0 1609 aa24.56■■□□□ 1.52
LINC00240-203ENST00000606878 ZFYVE9O95405 1425 aa24.55■■□□□ 1.52
LINC00240-203ENST00000606878 SENP3Q9H4L4 574 aaPredicted RBP24.55■■□□□ 1.52
LINC00240-203ENST00000606878 IQSEC2Q5JU85 1478 aa24.55■■□□□ 1.52
LINC00240-203ENST00000606878 RAB3GAP2Q9H2M9 1393 aa24.54■■□□□ 1.52
LINC00240-203ENST00000606878 HRCP23327 699 aa24.54■■□□□ 1.52
LINC00240-203ENST00000606878 CPS1P31327 1500 aa24.53■■□□□ 1.52
LINC00240-203ENST00000606878 PLEKHG1Q9ULL1 1385 aa24.53■■□□□ 1.52
LINC00240-203ENST00000606878 UBAP1LF5GYI3 381 aa24.52■■□□□ 1.52
LINC00240-203ENST00000606878 KCNA6P17658 529 aa24.52■■□□□ 1.52
LINC00240-203ENST00000606878 TBX22Q9Y458 520 aa24.51■■□□□ 1.51
LINC00240-203ENST00000606878 SPHKAPQ2M3C7 1700 aa24.5■■□□□ 1.51
LINC00240-203ENST00000606878 TRPM2O94759 1503 aa24.49■■□□□ 1.51
LINC00240-203ENST00000606878 TOM1O60784 492 aa24.47■■□□□ 1.51
LINC00240-203ENST00000606878 MYO5BQ9ULV0 1848 aa24.45■■□□□ 1.5
LINC00240-203ENST00000606878 RPGRIP1LQ68CZ1 1315 aa24.45■■□□□ 1.5
LINC00240-203ENST00000606878 VGFO15240 615 aaPredicted RBP24.44■■□□□ 1.5
LINC00240-203ENST00000606878 PROSER2Q86WR7 435 aaPredicted RBP24.44■■□□□ 1.5
LINC00240-203ENST00000606878 CCDC144AA2RUR9 1427 aa24.42■■□□□ 1.5
LINC00240-203ENST00000606878 CLTCL1P53675 1640 aa24.42■■□□□ 1.5
LINC00240-203ENST00000606878 LRRC7Q96NW7 1537 aa24.4■■□□□ 1.5
LINC00240-203ENST00000606878 RGL3Q3MIN7 710 aa24.39■■□□□ 1.49
LINC00240-203ENST00000606878 ADAMTS13Q76LX8 1427 aa24.37■■□□□ 1.49
LINC00240-203ENST00000606878 PIP4K2BP78356 416 aa24.36■■□□□ 1.49
LINC00240-203ENST00000606878 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
LINC00240-203ENST00000606878 PIK3R4Q99570 1358 aa24.35■■□□□ 1.49
LINC00240-203ENST00000606878 KIF1BO60333 1816 aa24.35■■□□□ 1.49
LINC00240-203ENST00000606878 STRCP1A6NGW2 1772 aa24.34■■□□□ 1.49
LINC00240-203ENST00000606878 TMEM94Q12767 1356 aa24.34■■□□□ 1.49
LINC00240-203ENST00000606878 AMOTL2Q9Y2J4 779 aa24.34■■□□□ 1.49
LINC00240-203ENST00000606878 RBM33Q96EV2 1170 aaKnown RBP24.33■■□□□ 1.49
LINC00240-203ENST00000606878 NEXMIFQ5QGS0 1516 aa24.3■■□□□ 1.48
LINC00240-203ENST00000606878 ANKRD30BQ9BXX2 1392 aa24.28■■□□□ 1.48
LINC00240-203ENST00000606878 SPATA31E1Q6ZUB1 1445 aa24.27■■□□□ 1.48
LINC00240-203ENST00000606878 NKTRP30414 1462 aaKnown RBP24.27■■□□□ 1.48
LINC00240-203ENST00000606878 C14orf37Q86TY3 774 aa24.27■■□□□ 1.48
LINC00240-203ENST00000606878 DIP2AQ14689 1571 aa24.27■■□□□ 1.48
LINC00240-203ENST00000606878 METP08581 1390 aa24.26■■□□□ 1.47
LINC00240-203ENST00000606878 SETBP1Q9Y6X0 1596 aa24.25■■□□□ 1.47
LINC00240-203ENST00000606878 ADGRF5Q8IZF2 1346 aa24.24■■□□□ 1.47
LINC00240-203ENST00000606878 MSH6P52701 1360 aa24.23■■□□□ 1.47
LINC00240-203ENST00000606878 NWD1Q149M9 1564 aa24.23■■□□□ 1.47
LINC00240-203ENST00000606878 CHD2O14647 1828 aaKnown RBP24.23■■□□□ 1.47
LINC00240-203ENST00000606878 PTPRUQ92729 1446 aa24.22■■□□□ 1.47
LINC00240-203ENST00000606878 NCOA3Q9Y6Q9 1424 aa24.22■■□□□ 1.47
LINC00240-203ENST00000606878 TRIM26Q12899 539 aaPredicted RBP24.22■■□□□ 1.47
LINC00240-203ENST00000606878 C19orf44Q9H6X5 657 aa24.21■■□□□ 1.47
LINC00240-203ENST00000606878 HSPA1LP34931 641 aa24.19■■□□□ 1.46
LINC00240-203ENST00000606878 SLAIN2Q9P270 581 aa24.18■■□□□ 1.46
LINC00240-203ENST00000606878 NRXN3Q9Y4C0 1643 aa24.17■■□□□ 1.46
LINC00240-203ENST00000606878 ATF3P18847 181 aa24.17■■□□□ 1.46
LINC00240-203ENST00000606878 CADPS2Q86UW7 1296 aa24.15■■□□□ 1.46
LINC00240-203ENST00000606878 STAC3Q96MF2 364 aa24.14■■□□□ 1.45
LINC00240-203ENST00000606878 XIRP1Q702N8 1843 aaKnown RBP24.13■■□□□ 1.45
LINC00240-203ENST00000606878 KDM2AQ9Y2K7 1162 aa24.13■■□□□ 1.45
LINC00240-203ENST00000606878 PPLO60437 1756 aa24.13■■□□□ 1.45
LINC00240-203ENST00000606878 ALKQ9UM73 1620 aa24.13■■□□□ 1.45
LINC00240-203ENST00000606878 DCAF11Q8TEB1 546 aa24.12■■□□□ 1.45
LINC00240-203ENST00000606878 C14orf93Q9H972 538 aaKnown RBP24.12■■□□□ 1.45
LINC00240-203ENST00000606878 FAM135BQ49AJ0 1406 aa24.11■■□□□ 1.45
LINC00240-203ENST00000606878 TMEM132EQ6IEE7 984 aa24.1■■□□□ 1.45
LINC00240-203ENST00000606878 STK26Q9P289 416 aa24.1■■□□□ 1.45
LINC00240-203ENST00000606878 CFAP70Q5T0N1 1121 aa24.07■■□□□ 1.44
LINC00240-203ENST00000606878 PIK3C2GO75747 1445 aa24.07■■□□□ 1.44
LINC00240-203ENST00000606878 ROBO2Q9HCK4 1378 aa24.05■■□□□ 1.44
LINC00240-203ENST00000606878 XRN1Q8IZH2 1706 aaKnown RBP24.04■■□□□ 1.44
LINC00240-203ENST00000606878 MYOM2P54296 1465 aa24.03■■□□□ 1.44
LINC00240-203ENST00000606878 LRPPRCP42704 1394 aaKnown RBP24.03■■□□□ 1.44
LINC00240-203ENST00000606878 ABCC11Q96J66 1382 aa24.03■■□□□ 1.44
LINC00240-203ENST00000606878 DHX57Q6P158 1386 aaKnown RBP24.02■■□□□ 1.44
LINC00240-203ENST00000606878 PTCH1Q13635 1447 aa24.01■■□□□ 1.43
LINC00240-203ENST00000606878 NRXN1Q9ULB1 1477 aa24.01■■□□□ 1.43
LINC00240-203ENST00000606878 WAPLQ7Z5K2 1190 aa24■■□□□ 1.43
LINC00240-203ENST00000606878 SIRT1Q96EB6 747 aa24■■□□□ 1.43
LINC00240-203ENST00000606878 IFT172Q9UG01 1749 aa24■■□□□ 1.43
LINC00240-203ENST00000606878 DCCP43146 1447 aa23.99■■□□□ 1.43
LINC00240-203ENST00000606878 PRAG1Q86YV5 1406 aa23.99■■□□□ 1.43
LINC00240-203ENST00000606878 ADGRL3Q9HAR2 1447 aa23.99■■□□□ 1.43
LINC00240-203ENST00000606878 SETD1AO15047 1707 aaKnown RBP23.98■■□□□ 1.43
LINC00240-203ENST00000606878 SIN3AQ96ST3 1273 aa23.97■■□□□ 1.43
LINC00240-203ENST00000606878 YTHDC2Q9H6S0 1430 aaKnown RBP23.97■■□□□ 1.43
LINC00240-203ENST00000606878 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.97■■□□□ 1.43
LINC00240-203ENST00000606878 NEUROD1Q13562 356 aa23.96■■□□□ 1.43
LINC00240-203ENST00000606878 TECPR2O15040 1411 aa23.94■■□□□ 1.42
LINC00240-203ENST00000606878 BRINP3Q76B58 766 aa23.94■■□□□ 1.42
LINC00240-203ENST00000606878 DISP3Q9P2K9 1392 aa23.93■■□□□ 1.42
LINC00240-203ENST00000606878 POGKQ9P215 609 aa23.91■■□□□ 1.42
LINC00240-203ENST00000606878 ROBO1Q9Y6N7 1651 aa23.91■■□□□ 1.42
LINC00240-203ENST00000606878 L3MBTL2Q969R5 705 aa23.9■■□□□ 1.42
LINC00240-203ENST00000606878 MST1RQ04912 1400 aa23.9■■□□□ 1.42
LINC00240-203ENST00000606878 PRAM1Q96QH2 718 aa23.89■■□□□ 1.41
LINC00240-203ENST00000606878 TRAK1Q9UPV9 953 aa23.89■■□□□ 1.41
LINC00240-203ENST00000606878 ASXL1Q8IXJ9 1541 aa23.88■■□□□ 1.41
LINC00240-203ENST00000606878 PLEKHH1Q9ULM0 1364 aa23.88■■□□□ 1.41
LINC00240-203ENST00000606878 SAFB2Q14151 953 aaKnown RBP eCLIP23.86■■□□□ 1.41
LINC00240-203ENST00000606878 ORAI2Q96SN7 254 aa23.85■■□□□ 1.41
LINC00240-203ENST00000606878 C1orf167Q5SNV9 1468 aa23.85■■□□□ 1.41
LINC00240-203ENST00000606878 LAMC1P11047 1609 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms