RNA–Protein interactions for RNA: ENST00000602582.5

TRIM11-206, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 682 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-206ENST00000602582 ZNF335Q9H4Z2 1342 aaPredicted RBP21.79■■□□□ 1.08
TRIM11-206ENST00000602582 TMEM131LA2VDJ0 1609 aa21.77■■□□□ 1.08
TRIM11-206ENST00000602582 TMEM2Q9UHN6 1383 aa21.77■■□□□ 1.08
TRIM11-206ENST00000602582 TONSLQ96HA7 1378 aa21.76■■□□□ 1.07
TRIM11-206ENST00000602582 STAG3Q9UJ98 1225 aa21.75■■□□□ 1.07
TRIM11-206ENST00000602582 LTKP29376 864 aa21.74■■□□□ 1.07
TRIM11-206ENST00000602582 PPP1R15AO75807 674 aaPredicted RBP21.72■■□□□ 1.07
TRIM11-206ENST00000602582 ANKRD30BQ9BXX2 1392 aa21.72■■□□□ 1.07
TRIM11-206ENST00000602582 TXNDC2Q86VQ3 553 aa21.71■■□□□ 1.07
TRIM11-206ENST00000602582 IQSEC2Q5JU85 1478 aa21.71■■□□□ 1.07
TRIM11-206ENST00000602582 TRPM2O94759 1503 aa21.7■■□□□ 1.06
TRIM11-206ENST00000602582 STRCP1A6NGW2 1772 aa21.69■■□□□ 1.06
TRIM11-206ENST00000602582 SLC4A1APQ9BWU0 796 aaKnown RBP21.69■■□□□ 1.06
TRIM11-206ENST00000602582 EID1Q9Y6B2 187 aa21.69■■□□□ 1.06
TRIM11-206ENST00000602582 ZFYVE9O95405 1425 aa21.69■■□□□ 1.06
TRIM11-206ENST00000602582 CLTCL1P53675 1640 aa21.68■■□□□ 1.06
TRIM11-206ENST00000602582 CPS1P31327 1500 aa21.67■■□□□ 1.06
TRIM11-206ENST00000602582 RIMS2Q9UQ26 1411 aa21.64■■□□□ 1.06
TRIM11-206ENST00000602582 FOXD1Q16676 465 aa21.64■■□□□ 1.05
TRIM11-206ENST00000602582 CHGAP10645 457 aaKnown RBP21.62■■□□□ 1.05
TRIM11-206ENST00000602582 KIF1BO60333 1816 aa21.61■■□□□ 1.05
TRIM11-206ENST00000602582 PLEKHG1Q9ULL1 1385 aa21.59■■□□□ 1.05
TRIM11-206ENST00000602582 LRRC7Q96NW7 1537 aa21.55■■□□□ 1.04
TRIM11-206ENST00000602582 HDGFP51858 240 aaKnown RBP21.54■■□□□ 1.04
TRIM11-206ENST00000602582 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.54■■□□□ 1.04
TRIM11-206ENST00000602582 SLC26A8Q96RN1 970 aa21.54■■□□□ 1.04
TRIM11-206ENST00000602582 NEXMIFQ5QGS0 1516 aa21.54■■□□□ 1.04
TRIM11-206ENST00000602582 NWD1Q149M9 1564 aa21.53■■□□□ 1.04
TRIM11-206ENST00000602582 XIRP1Q702N8 1843 aaKnown RBP21.53■■□□□ 1.04
TRIM11-206ENST00000602582 NUTM2DQ5VT03 806 aaPredicted RBP21.52■■□□□ 1.04
TRIM11-206ENST00000602582 DIP2AQ14689 1571 aa21.52■■□□□ 1.04
TRIM11-206ENST00000602582 NRXN3Q9Y4C0 1643 aa21.51■■□□□ 1.03
TRIM11-206ENST00000602582 L3MBTL2Q969R5 705 aa21.51■■□□□ 1.03
TRIM11-206ENST00000602582 ADAMTS13Q76LX8 1427 aa21.51■■□□□ 1.03
TRIM11-206ENST00000602582 CHD2O14647 1828 aaKnown RBP21.5■■□□□ 1.03
TRIM11-206ENST00000602582 SENP3Q9H4L4 574 aaPredicted RBP21.5■■□□□ 1.03
TRIM11-206ENST00000602582 SETBP1Q9Y6X0 1596 aa21.48■■□□□ 1.03
TRIM11-206ENST00000602582 ALKQ9UM73 1620 aa21.48■■□□□ 1.03
TRIM11-206ENST00000602582 BCANQ96GW7 911 aa21.48■■□□□ 1.03
TRIM11-206ENST00000602582 ZNF326Q5BKZ1 582 aaKnown RBP21.47■■□□□ 1.03
TRIM11-206ENST00000602582 NKTRP30414 1462 aaKnown RBP21.46■■□□□ 1.03
TRIM11-206ENST00000602582 PPLO60437 1756 aa21.46■■□□□ 1.03
TRIM11-206ENST00000602582 UBAP1LF5GYI3 381 aa21.46■■□□□ 1.03
TRIM11-206ENST00000602582 KCNA6P17658 529 aa21.46■■□□□ 1.03
TRIM11-206ENST00000602582 CCDC144AA2RUR9 1427 aa21.46■■□□□ 1.03
TRIM11-206ENST00000602582 TBX22Q9Y458 520 aa21.44■■□□□ 1.02
TRIM11-206ENST00000602582 IFT172Q9UG01 1749 aa21.41■■□□□ 1.02
TRIM11-206ENST00000602582 SPATA31E1Q6ZUB1 1445 aa21.41■■□□□ 1.02
TRIM11-206ENST00000602582 MIER1Q8N108 512 aa21.41■■□□□ 1.02
TRIM11-206ENST00000602582 PIK3R4Q99570 1358 aa21.4■■□□□ 1.02
TRIM11-206ENST00000602582 SETD1AO15047 1707 aaKnown RBP21.4■■□□□ 1.02
TRIM11-206ENST00000602582 TMEM94Q12767 1356 aa21.39■■□□□ 1.02
TRIM11-206ENST00000602582 XRN1Q8IZH2 1706 aaKnown RBP21.38■■□□□ 1.01
TRIM11-206ENST00000602582 TOM1O60784 492 aa21.38■■□□□ 1.01
TRIM11-206ENST00000602582 PTPRUQ92729 1446 aa21.38■■□□□ 1.01
TRIM11-206ENST00000602582 DISP3Q9P2K9 1392 aa21.37■■□□□ 1.01
TRIM11-206ENST00000602582 RPGRIP1LQ68CZ1 1315 aa21.37■■□□□ 1.01
TRIM11-206ENST00000602582 NBPF8Q3BBV2 869 aa21.36■■□□□ 1.01
TRIM11-206ENST00000602582 PROSER2Q86WR7 435 aaPredicted RBP21.35■■□□□ 1.01
TRIM11-206ENST00000602582 RBM33Q96EV2 1170 aaKnown RBP21.34■■□□□ 1.01
TRIM11-206ENST00000602582 METP08581 1390 aa21.34■■□□□ 1.01
TRIM11-206ENST00000602582 VGFO15240 615 aaPredicted RBP21.33■■□□□ 1.01
TRIM11-206ENST00000602582 PIP4K2BP78356 416 aa21.32■■□□□ 1
TRIM11-206ENST00000602582 HIRIP3Q9BW71 556 aaPredicted RBP21.31■■□□□ 1
TRIM11-206ENST00000602582 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
TRIM11-206ENST00000602582 HSPA5P11021 654 aaKnown RBP21.3■■□□□ 1
TRIM11-206ENST00000602582 RGL3Q3MIN7 710 aa21.3■■□□□ 1
TRIM11-206ENST00000602582 EIF4G2P78344 907 aaKnown RBP eCLIP21.29■■□□□ 1
TRIM11-206ENST00000602582 AMOTL2Q9Y2J4 779 aa21.29■■□□□ 1
TRIM11-206ENST00000602582 NCOA3Q9Y6Q9 1424 aa21.29■■□□□ 1
TRIM11-206ENST00000602582 ILDR2Q71H61 639 aa21.28■■□□□ 1
TRIM11-206ENST00000602582 ADGRF5Q8IZF2 1346 aa21.28■■□□□ 1
TRIM11-206ENST00000602582 RALGAPBQ86X10 1494 aa21.26■□□□□ 0.99
TRIM11-206ENST00000602582 MSH6P52701 1360 aa21.26■□□□□ 0.99
TRIM11-206ENST00000602582 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.26■□□□□ 0.99
TRIM11-206ENST00000602582 PIK3C2GO75747 1445 aa21.24■□□□□ 0.99
TRIM11-206ENST00000602582 DDX10Q13206 875 aaKnown RBP21.24■□□□□ 0.99
TRIM11-206ENST00000602582 MYOM2P54296 1465 aa21.24■□□□□ 0.99
TRIM11-206ENST00000602582 PRAG1Q86YV5 1406 aa21.23■□□□□ 0.99
TRIM11-206ENST00000602582 ROBO1Q9Y6N7 1651 aa21.22■□□□□ 0.99
TRIM11-206ENST00000602582 NRXN1Q9ULB1 1477 aa21.22■□□□□ 0.99
TRIM11-206ENST00000602582 HSPA1LP34931 641 aa21.22■□□□□ 0.99
TRIM11-206ENST00000602582 ASXL1Q8IXJ9 1541 aa21.22■□□□□ 0.99
TRIM11-206ENST00000602582 PTCH1Q13635 1447 aa21.21■□□□□ 0.99
TRIM11-206ENST00000602582 NALCNQ8IZF0 1738 aa21.21■□□□□ 0.99
TRIM11-206ENST00000602582 FAM135BQ49AJ0 1406 aa21.2■□□□□ 0.98
TRIM11-206ENST00000602582 LAMC1P11047 1609 aa21.18■□□□□ 0.98
TRIM11-206ENST00000602582 SOCS7O14512 581 aa21.18■□□□□ 0.98
TRIM11-206ENST00000602582 C14orf37Q86TY3 774 aa21.18■□□□□ 0.98
TRIM11-206ENST00000602582 C19orf44Q9H6X5 657 aa21.17■□□□□ 0.98
TRIM11-206ENST00000602582 ROBO2Q9HCK4 1378 aa21.17■□□□□ 0.98
TRIM11-206ENST00000602582 DCCP43146 1447 aa21.17■□□□□ 0.98
TRIM11-206ENST00000602582 KNDC1Q76NI1 1749 aa21.17■□□□□ 0.98
TRIM11-206ENST00000602582 ADGRL3Q9HAR2 1447 aa21.16■□□□□ 0.98
TRIM11-206ENST00000602582 DCAF11Q8TEB1 546 aa21.16■□□□□ 0.98
TRIM11-206ENST00000602582 USP47Q96K76 1375 aa21.15■□□□□ 0.98
TRIM11-206ENST00000602582 WASHC2AQ641Q2 1341 aa21.15■□□□□ 0.98
TRIM11-206ENST00000602582 SLAIN2Q9P270 581 aa21.14■□□□□ 0.97
TRIM11-206ENST00000602582 TECPR2O15040 1411 aa21.13■□□□□ 0.97
TRIM11-206ENST00000602582 CADPS2Q86UW7 1296 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms