RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 RUSC2Q8N2Y8 1516 aa12.16□□□□□ -0.46
FARP1-239ENST00000602171 CUL7Q14999 1698 aa12.15□□□□□ -0.46
FARP1-239ENST00000602171 TRIM6-TRIM34B2RNG4 842 aa12.14□□□□□ -0.47
FARP1-239ENST00000602171 EN1Q05925 392 aaPredicted RBP12.14□□□□□ -0.47
FARP1-239ENST00000602171 NBR1Q14596 966 aa12.14□□□□□ -0.47
FARP1-239ENST00000602171 ADAMTS12P58397 1594 aa12.13□□□□□ -0.47
FARP1-239ENST00000602171 NYAP1Q6ZVC0 841 aa12.13□□□□□ -0.47
FARP1-239ENST00000602171 FAM9AQ8IZU1 332 aaPredicted RBP12.13□□□□□ -0.47
FARP1-239ENST00000602171 MAP3K7O43318 606 aa12.12□□□□□ -0.47
FARP1-239ENST00000602171 GRIN2AQ12879 1464 aa12.11□□□□□ -0.47
FARP1-239ENST00000602171 RAPGEF2Q9Y4G8 1499 aa12.11□□□□□ -0.47
FARP1-239ENST00000602171 ZFRQ96KR1 1074 aaKnown RBP12.11□□□□□ -0.47
FARP1-239ENST00000602171 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
FARP1-239ENST00000602171 RGS20O76081 388 aa12.1□□□□□ -0.47
FARP1-239ENST00000602171 PACS2Q86VP3 889 aa12.1□□□□□ -0.47
FARP1-239ENST00000602171 CERKQ8TCT0 537 aa12.1□□□□□ -0.47
FARP1-239ENST00000602171 FAM98CQ17RN3 349 aaKnown RBP12.09□□□□□ -0.47
FARP1-239ENST00000602171 PRXQ9BXM0 1461 aa12.08□□□□□ -0.47
FARP1-239ENST00000602171 CHD1O14646 1710 aa12.06□□□□□ -0.48
FARP1-239ENST00000602171 NUP160Q12769 1436 aa12.05□□□□□ -0.48
FARP1-239ENST00000602171 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
FARP1-239ENST00000602171 BCAMP50895 628 aa12.04□□□□□ -0.48
FARP1-239ENST00000602171 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
FARP1-239ENST00000602171 GRXCR2A6NFK2 248 aa12.03□□□□□ -0.48
FARP1-239ENST00000602171 LRCH3Q96II8 777 aa12.02□□□□□ -0.49
FARP1-239ENST00000602171 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.02□□□□□ -0.49
FARP1-239ENST00000602171 A0A0G2JS52 829 aa12.01□□□□□ -0.49
FARP1-239ENST00000602171 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
FARP1-239ENST00000602171 PRSS12P56730 875 aa12.01□□□□□ -0.49
FARP1-239ENST00000602171 KIAA0586Q9BVV6 1533 aa12.01□□□□□ -0.49
FARP1-239ENST00000602171 KIF21BO75037 1637 aa12□□□□□ -0.49
FARP1-239ENST00000602171 CDCA7LQ96GN5 454 aa12□□□□□ -0.49
FARP1-239ENST00000602171 TSR3Q9UJK0 312 aaKnown RBP12□□□□□ -0.49
FARP1-239ENST00000602171 TSKSQ9UJT2 592 aa12□□□□□ -0.49
FARP1-239ENST00000602171 GOLGA3Q08378 1498 aa12□□□□□ -0.49
FARP1-239ENST00000602171 UBTFP17480 764 aaKnown RBP11.99□□□□□ -0.49
FARP1-239ENST00000602171 CEP170Q5SW79 1584 aa11.99□□□□□ -0.49
FARP1-239ENST00000602171 CLASP1Q7Z460 1538 aa11.98□□□□□ -0.49
FARP1-239ENST00000602171 WBP1LQ9NX94 342 aa11.98□□□□□ -0.49
FARP1-239ENST00000602171 NBPF26B4DH59 902 aa11.96□□□□□ -0.49
FARP1-239ENST00000602171 OSBPP22059 807 aa11.96□□□□□ -0.49
FARP1-239ENST00000602171 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
FARP1-239ENST00000602171 HPS5Q9UPZ3 1129 aa11.95□□□□□ -0.5
FARP1-239ENST00000602171 IQGAP2Q13576 1575 aa11.94□□□□□ -0.5
FARP1-239ENST00000602171 KCNC4Q03721 635 aa11.94□□□□□ -0.5
FARP1-239ENST00000602171 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
FARP1-239ENST00000602171 ARHGEF1Q92888 912 aaKnown RBP11.93□□□□□ -0.5
FARP1-239ENST00000602171 PRIM1P49642 420 aaKnown RBP11.92□□□□□ -0.5
FARP1-239ENST00000602171 PPP4CP60510 307 aa11.92□□□□□ -0.5
FARP1-239ENST00000602171 TATDN2Q93075 761 aa11.92□□□□□ -0.5
FARP1-239ENST00000602171 CARMIL2Q6F5E8 1435 aa11.92□□□□□ -0.5
FARP1-239ENST00000602171 PRG4Q92954 1404 aaPredicted RBP11.9□□□□□ -0.5
FARP1-239ENST00000602171 PNMA3Q9UL41 463 aa11.9□□□□□ -0.5
FARP1-239ENST00000602171 CTTNBP2Q8WZ74 1663 aa11.9□□□□□ -0.5
FARP1-239ENST00000602171 SHROOM2Q13796 1616 aa11.89□□□□□ -0.51
FARP1-239ENST00000602171 ARHGEF11O15085 1522 aa11.88□□□□□ -0.51
FARP1-239ENST00000602171 UGGT2Q9NYU1 1516 aa11.88□□□□□ -0.51
FARP1-239ENST00000602171 FAM198AQ9UFP1 575 aa11.88□□□□□ -0.51
FARP1-239ENST00000602171 TNIKQ9UKE5 1360 aa11.88□□□□□ -0.51
FARP1-239ENST00000602171 SMAPO00193 183 aa11.87□□□□□ -0.51
FARP1-239ENST00000602171 SAMD7Q7Z3H4 446 aa11.87□□□□□ -0.51
FARP1-239ENST00000602171 NECTIN2Q92692 538 aa11.87□□□□□ -0.51
FARP1-239ENST00000602171 TSHZ2Q9NRE2 1034 aa11.87□□□□□ -0.51
FARP1-239ENST00000602171 CDHR5Q9HBB8 845 aa11.86□□□□□ -0.51
FARP1-239ENST00000602171 NUDT18Q6ZVK8 323 aa11.85□□□□□ -0.51
FARP1-239ENST00000602171 RANGAP1P46060 587 aaPredicted RBP11.84□□□□□ -0.51
FARP1-239ENST00000602171 IRX2Q9BZI1 471 aaPredicted RBP11.84□□□□□ -0.51
FARP1-239ENST00000602171 LOC105371045A0A1W2PR82 267 aa11.83□□□□□ -0.52
FARP1-239ENST00000602171 TTC13Q8NBP0 860 aa11.83□□□□□ -0.52
FARP1-239ENST00000602171 RIMBP3CA6NJZ7 1639 aa11.82□□□□□ -0.52
FARP1-239ENST00000602171 RIMBP3BA6NNM3 1639 aa11.82□□□□□ -0.52
FARP1-239ENST00000602171 RIMBP3Q9UFD9 1639 aa11.82□□□□□ -0.52
FARP1-239ENST00000602171 DISP1Q96F81 1524 aa11.82□□□□□ -0.52
FARP1-239ENST00000602171 SLC4A3P48751 1232 aa11.82□□□□□ -0.52
FARP1-239ENST00000602171 NPDC1Q9NQX5 325 aaPredicted RBP11.82□□□□□ -0.52
FARP1-239ENST00000602171 EFCAB5A4FU69 1503 aa11.81□□□□□ -0.52
FARP1-239ENST00000602171 PTPRGP23470 1445 aa11.81□□□□□ -0.52
FARP1-239ENST00000602171 P3H3Q8IVL6 736 aa11.81□□□□□ -0.52
FARP1-239ENST00000602171 KIAA0556O60303 1618 aa11.8□□□□□ -0.52
FARP1-239ENST00000602171 CYB5RLQ6IPT4 315 aa11.8□□□□□ -0.52
FARP1-239ENST00000602171 KCNV2Q8TDN2 545 aa11.8□□□□□ -0.52
FARP1-239ENST00000602171 PADI6Q6TGC4 694 aa11.79□□□□□ -0.52
FARP1-239ENST00000602171 ARAP1Q96P48 1450 aa11.78□□□□□ -0.52
FARP1-239ENST00000602171 C3orf80F5H4A9 247 aa11.78□□□□□ -0.52
FARP1-239ENST00000602171 SLF2Q8IX21 1173 aa11.78□□□□□ -0.52
FARP1-239ENST00000602171 SAMD9Q5K651 1589 aa11.78□□□□□ -0.52
FARP1-239ENST00000602171 ERCC6L2Q5T890 1561 aa11.78□□□□□ -0.52
FARP1-239ENST00000602171 CLIP1P30622 1438 aa11.77□□□□□ -0.52
FARP1-239ENST00000602171 RNF40O75150 1001 aa11.77□□□□□ -0.53
FARP1-239ENST00000602171 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
FARP1-239ENST00000602171 TJAP1Q5JTD0 557 aa11.76□□□□□ -0.53
FARP1-239ENST00000602171 IL21Q9HBE4 155 aa11.76□□□□□ -0.53
FARP1-239ENST00000602171 CEP162Q5TB80 1403 aa11.76□□□□□ -0.53
FARP1-239ENST00000602171 MLLT3P42568 568 aaPredicted RBP11.75□□□□□ -0.53
FARP1-239ENST00000602171 FMN1Q68DA7 1419 aa11.75□□□□□ -0.53
FARP1-239ENST00000602171 ARHGAP35Q9NRY4 1499 aa11.75□□□□□ -0.53
FARP1-239ENST00000602171 FHOD3Q2V2M9 1422 aa11.74□□□□□ -0.53
FARP1-239ENST00000602171 MTRQ99707 1265 aa11.73□□□□□ -0.53
FARP1-239ENST00000602171 UACAQ9BZF9 1416 aa11.73□□□□□ -0.53
FARP1-239ENST00000602171 SWT1Q5T5J6 900 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms