RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 STAG3Q9UJ98 1225 aa33.03■■■□□ 2.88
IRF3-227ENST00000600911 ZFYVE9O95405 1425 aa33■■■□□ 2.87
IRF3-227ENST00000600911 UHRF1BP1Q6BDS2 1440 aa32.98■■■□□ 2.87
IRF3-227ENST00000600911 ADGRF5Q8IZF2 1346 aa32.98■■■□□ 2.87
IRF3-227ENST00000600911 MYOM2P54296 1465 aa32.98■■■□□ 2.87
IRF3-227ENST00000600911 PRAG1Q86YV5 1406 aa32.97■■■□□ 2.87
IRF3-227ENST00000600911 RIMS2Q9UQ26 1411 aa32.97■■■□□ 2.87
IRF3-227ENST00000600911 TMEM2Q9UHN6 1383 aa32.94■■■□□ 2.86
IRF3-227ENST00000600911 NRXN1Q9ULB1 1477 aa32.94■■■□□ 2.86
IRF3-227ENST00000600911 ARHGAP23Q9P227 1491 aa32.93■■■□□ 2.86
IRF3-227ENST00000600911 RPGRIP1LQ68CZ1 1315 aa32.93■■■□□ 2.86
IRF3-227ENST00000600911 SLIT1O75093 1534 aa32.93■■■□□ 2.86
IRF3-227ENST00000600911 SENP3Q9H4L4 574 aaPredicted RBP32.92■■■□□ 2.86
IRF3-227ENST00000600911 TRPM1Q7Z4N2 1603 aa32.91■■■□□ 2.86
IRF3-227ENST00000600911 LTKP29376 864 aa32.88■■■□□ 2.85
IRF3-227ENST00000600911 LMTK3Q96Q04 1460 aa32.87■■■□□ 2.85
IRF3-227ENST00000600911 PIK3C2GO75747 1445 aa32.86■■■□□ 2.85
IRF3-227ENST00000600911 NRXN3Q9Y4C0 1643 aa32.86■■■□□ 2.85
IRF3-227ENST00000600911 THEMISQ8N1K5 641 aaPredicted RBP32.85■■■□□ 2.85
IRF3-227ENST00000600911 IQGAP1P46940 1657 aa32.83■■■□□ 2.85
IRF3-227ENST00000600911 RALGAPBQ86X10 1494 aa32.81■■■□□ 2.84
IRF3-227ENST00000600911 VGFO15240 615 aaPredicted RBP32.8■■■□□ 2.84
IRF3-227ENST00000600911 NBPF1Q3BBV0 1214 aa32.8■■■□□ 2.84
IRF3-227ENST00000600911 SETD1AO15047 1707 aaKnown RBP32.8■■■□□ 2.84
IRF3-227ENST00000600911 KIAA1210Q9ULL0 1709 aa32.78■■■□□ 2.84
IRF3-227ENST00000600911 HSPA2P54652 639 aa32.78■■■□□ 2.84
IRF3-227ENST00000600911 CFAP70Q5T0N1 1121 aa32.78■■■□□ 2.84
IRF3-227ENST00000600911 TXNDC2Q86VQ3 553 aa32.78■■■□□ 2.84
IRF3-227ENST00000600911 STAC3Q96MF2 364 aa32.77■■■□□ 2.84
IRF3-227ENST00000600911 POLR1AO95602 1720 aaPredicted RBP32.77■■■□□ 2.84
IRF3-227ENST00000600911 SCAF11Q99590 1463 aaKnown RBP32.77■■■□□ 2.84
IRF3-227ENST00000600911 ASXL1Q8IXJ9 1541 aa32.75■■■□□ 2.83
IRF3-227ENST00000600911 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.74■■■□□ 2.83
IRF3-227ENST00000600911 ALKQ9UM73 1620 aa32.74■■■□□ 2.83
IRF3-227ENST00000600911 SETBP1Q9Y6X0 1596 aa32.74■■■□□ 2.83
IRF3-227ENST00000600911 PLEKHG1Q9ULL1 1385 aa32.71■■■□□ 2.83
IRF3-227ENST00000600911 C14orf93Q9H972 538 aaKnown RBP32.7■■■□□ 2.83
IRF3-227ENST00000600911 ADGRB1O14514 1584 aa32.7■■■□□ 2.83
IRF3-227ENST00000600911 LAMC1P11047 1609 aa32.7■■■□□ 2.82
IRF3-227ENST00000600911 ADAMTS13Q76LX8 1427 aa32.69■■■□□ 2.82
IRF3-227ENST00000600911 EID1Q9Y6B2 187 aa32.69■■■□□ 2.82
IRF3-227ENST00000600911 NCKAP5LQ9HCH0 1330 aa32.68■■■□□ 2.82
IRF3-227ENST00000600911 ROCK2O75116 1388 aaKnown RBP32.67■■■□□ 2.82
IRF3-227ENST00000600911 GPRASP1Q5JY77 1395 aa32.67■■■□□ 2.82
IRF3-227ENST00000600911 STRCQ7RTU9 1775 aa32.67■■■□□ 2.82
IRF3-227ENST00000600911 HDGFP51858 240 aaKnown RBP32.66■■■□□ 2.82
IRF3-227ENST00000600911 TMEM132EQ6IEE7 984 aa32.65■■■□□ 2.82
IRF3-227ENST00000600911 ANKLE2Q86XL3 938 aa32.65■■■□□ 2.82
IRF3-227ENST00000600911 MED14O60244 1454 aa32.64■■■□□ 2.82
IRF3-227ENST00000600911 SLC26A8Q96RN1 970 aa32.6■■■□□ 2.81
IRF3-227ENST00000600911 CARD11Q9BXL7 1154 aa32.6■■■□□ 2.81
IRF3-227ENST00000600911 METP08581 1390 aa32.59■■■□□ 2.81
IRF3-227ENST00000600911 NPHP4O75161 1426 aaPredicted RBP32.58■■■□□ 2.81
IRF3-227ENST00000600911 BCANQ96GW7 911 aa32.58■■■□□ 2.81
IRF3-227ENST00000600911 HIRIP3Q9BW71 556 aaPredicted RBP32.56■■■□□ 2.8
IRF3-227ENST00000600911 USP47Q96K76 1375 aa32.52■■■□□ 2.8
IRF3-227ENST00000600911 DIP2AQ14689 1571 aa32.52■■■□□ 2.8
IRF3-227ENST00000600911 PTPRUQ92729 1446 aa32.52■■■□□ 2.8
IRF3-227ENST00000600911 ARHGEF28Q8N1W1 1705 aaKnown RBP32.51■■■□□ 2.8
IRF3-227ENST00000600911 HSPA5P11021 654 aaKnown RBP32.51■■■□□ 2.79
IRF3-227ENST00000600911 YTHDC2Q9H6S0 1430 aaKnown RBP32.49■■■□□ 2.79
IRF3-227ENST00000600911 TBX22Q9Y458 520 aa32.47■■■□□ 2.79
IRF3-227ENST00000600911 STK26Q9P289 416 aa32.46■■■□□ 2.79
IRF3-227ENST00000600911 TRAK1Q9UPV9 953 aa32.46■■■□□ 2.79
IRF3-227ENST00000600911 KNDC1Q76NI1 1749 aa32.44■■■□□ 2.78
IRF3-227ENST00000600911 CHD2O14647 1828 aaKnown RBP32.44■■■□□ 2.78
IRF3-227ENST00000600911 EIF4G2P78344 907 aaKnown RBP eCLIP32.44■■■□□ 2.782e-7■■■■■ 34.3
IRF3-227ENST00000600911 LRPPRCP42704 1394 aaKnown RBP32.42■■■□□ 2.78
IRF3-227ENST00000600911 XRN1Q8IZH2 1706 aaKnown RBP32.42■■■□□ 2.78
IRF3-227ENST00000600911 ST20-MTHFSA0A0A6YYL1 179 aa32.4■■■□□ 2.78
IRF3-227ENST00000600911 STRCP1A6NGW2 1772 aa32.38■■■□□ 2.77
IRF3-227ENST00000600911 CPS1P31327 1500 aa32.37■■■□□ 2.77
IRF3-227ENST00000600911 QRICH2Q9H0J4 1663 aa32.36■■■□□ 2.77
IRF3-227ENST00000600911 ABCC11Q96J66 1382 aa32.35■■■□□ 2.77
IRF3-227ENST00000600911 PLEKHH1Q9ULM0 1364 aa32.35■■■□□ 2.77
IRF3-227ENST00000600911 DLC1Q96QB1 1528 aa32.35■■■□□ 2.77
IRF3-227ENST00000600911 TECPR2O15040 1411 aa32.35■■■□□ 2.77
IRF3-227ENST00000600911 AEBP2Q6ZN18 517 aaPredicted RBP32.33■■■□□ 2.77
IRF3-227ENST00000600911 AMOTL2Q9Y2J4 779 aa32.33■■■□□ 2.77
IRF3-227ENST00000600911 ROBO2Q9HCK4 1378 aa32.33■■■□□ 2.77
IRF3-227ENST00000600911 TESK2Q96S53 571 aa32.32■■■□□ 2.76
IRF3-227ENST00000600911 PIK3R4Q99570 1358 aa32.32■■■□□ 2.76
IRF3-227ENST00000600911 NWD1Q149M9 1564 aa32.31■■■□□ 2.76
IRF3-227ENST00000600911 C11orf95C9JLR9 678 aaPredicted RBP32.3■■■□□ 2.76
IRF3-227ENST00000600911 WAPLQ7Z5K2 1190 aa32.3■■■□□ 2.76
IRF3-227ENST00000600911 KCNA6P17658 529 aa32.29■■■□□ 2.76
IRF3-227ENST00000600911 SAFB2Q14151 953 aaKnown RBP eCLIP32.29■■■□□ 2.76
IRF3-227ENST00000600911 PRAM1Q96QH2 718 aa32.29■■■□□ 2.76
IRF3-227ENST00000600911 EIF3AQ14152 1382 aaKnown RBP32.27■■■□□ 2.76
IRF3-227ENST00000600911 CENPJQ9HC77 1338 aaPredicted RBP32.27■■■□□ 2.76
IRF3-227ENST00000600911 ZNF316A6NFI3 1004 aaPredicted RBP32.26■■■□□ 2.76
IRF3-227ENST00000600911 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.26■■■□□ 2.75
IRF3-227ENST00000600911 PTCH1Q13635 1447 aa32.24■■■□□ 2.75
IRF3-227ENST00000600911 DISP3Q9P2K9 1392 aa32.22■■■□□ 2.75
IRF3-227ENST00000600911 FAM135BQ49AJ0 1406 aa32.22■■■□□ 2.75
IRF3-227ENST00000600911 RBM33Q96EV2 1170 aaKnown RBP32.19■■■□□ 2.74
IRF3-227ENST00000600911 TULP4Q9NRJ4 1543 aa32.19■■■□□ 2.74
IRF3-227ENST00000600911 ZNF335Q9H4Z2 1342 aaPredicted RBP32.18■■■□□ 2.74
IRF3-227ENST00000600911 SIRT1Q96EB6 747 aa32.18■■■□□ 2.74
IRF3-227ENST00000600911 POGKQ9P215 609 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms