RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 IQGAP1P46940 1657 aa20.32■□□□□ 0.84
SNRPA-208ENST00000600456 MYO5BQ9ULV0 1848 aa20.31■□□□□ 0.84
SNRPA-208ENST00000600456 KIF1BO60333 1816 aa20.3■□□□□ 0.84
SNRPA-208ENST00000600456 ANKRD30BQ9BXX2 1392 aa20.3■□□□□ 0.84
SNRPA-208ENST00000600456 PPP1R15AO75807 674 aaPredicted RBP20.29■□□□□ 0.84
SNRPA-208ENST00000600456 ZNF326Q5BKZ1 582 aaKnown RBP20.29■□□□□ 0.84
SNRPA-208ENST00000600456 PLEKHG1Q9ULL1 1385 aa20.28■□□□□ 0.84
SNRPA-208ENST00000600456 RPGRIP1LQ68CZ1 1315 aa20.27■□□□□ 0.84
SNRPA-208ENST00000600456 SPATA31E1Q6ZUB1 1445 aa20.26■□□□□ 0.83
SNRPA-208ENST00000600456 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
SNRPA-208ENST00000600456 ZNF335Q9H4Z2 1342 aaPredicted RBP20.22■□□□□ 0.83
SNRPA-208ENST00000600456 LTBP4Q8N2S1 1624 aa20.21■□□□□ 0.83
SNRPA-208ENST00000600456 BCANQ96GW7 911 aa20.21■□□□□ 0.83
SNRPA-208ENST00000600456 VGFO15240 615 aaPredicted RBP20.2■□□□□ 0.82
SNRPA-208ENST00000600456 NUTM2DQ5VT03 806 aaPredicted RBP20.2■□□□□ 0.82
SNRPA-208ENST00000600456 TBX22Q9Y458 520 aa20.19■□□□□ 0.82
SNRPA-208ENST00000600456 DIP2AQ14689 1571 aa20.18■□□□□ 0.82
SNRPA-208ENST00000600456 SLC26A8Q96RN1 970 aa20.18■□□□□ 0.82
SNRPA-208ENST00000600456 DHX57Q6P158 1386 aaKnown RBP20.18■□□□□ 0.82
SNRPA-208ENST00000600456 CPS1P31327 1500 aa20.17■□□□□ 0.82
SNRPA-208ENST00000600456 SETBP1Q9Y6X0 1596 aa20.17■□□□□ 0.82
SNRPA-208ENST00000600456 RGL3Q3MIN7 710 aa20.17■□□□□ 0.82
SNRPA-208ENST00000600456 PCGF6Q9BYE7 350 aa20.17■□□□□ 0.82
SNRPA-208ENST00000600456 ADAMTS13Q76LX8 1427 aa20.17■□□□□ 0.82
SNRPA-208ENST00000600456 CERKQ8TCT0 537 aa20.16■□□□□ 0.82
SNRPA-208ENST00000600456 PPLO60437 1756 aa20.15■□□□□ 0.82
SNRPA-208ENST00000600456 PIK3R4Q99570 1358 aa20.14■□□□□ 0.81
SNRPA-208ENST00000600456 IQSEC2Q5JU85 1478 aa20.13■□□□□ 0.81
SNRPA-208ENST00000600456 KCNA6P17658 529 aa20.13■□□□□ 0.81
SNRPA-208ENST00000600456 NRXN3Q9Y4C0 1643 aa20.13■□□□□ 0.81
SNRPA-208ENST00000600456 IFT172Q9UG01 1749 aa20.12■□□□□ 0.81
SNRPA-208ENST00000600456 MYOM2P54296 1465 aa20.11■□□□□ 0.81
SNRPA-208ENST00000600456 NWD1Q149M9 1564 aa20.1■□□□□ 0.81
SNRPA-208ENST00000600456 STAC3Q96MF2 364 aa20.1■□□□□ 0.81
SNRPA-208ENST00000600456 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
SNRPA-208ENST00000600456 ADGRF5Q8IZF2 1346 aa20.08■□□□□ 0.81
SNRPA-208ENST00000600456 NKTRP30414 1462 aaKnown RBP20.08■□□□□ 0.81
SNRPA-208ENST00000600456 NRXN1Q9ULB1 1477 aa20.07■□□□□ 0.8
SNRPA-208ENST00000600456 STRCP1A6NGW2 1772 aa20.06■□□□□ 0.8
SNRPA-208ENST00000600456 PIK3C2GO75747 1445 aa20.06■□□□□ 0.8
SNRPA-208ENST00000600456 LRRC7Q96NW7 1537 aa20.06■□□□□ 0.8
SNRPA-208ENST00000600456 METP08581 1390 aa20.05■□□□□ 0.8
SNRPA-208ENST00000600456 ALKQ9UM73 1620 aa20.05■□□□□ 0.8
SNRPA-208ENST00000600456 CHD2O14647 1828 aaKnown RBP20.04■□□□□ 0.8
SNRPA-208ENST00000600456 DCAF11Q8TEB1 546 aa20.03■□□□□ 0.8
SNRPA-208ENST00000600456 SIN3AQ96ST3 1273 aa20.01■□□□□ 0.79
SNRPA-208ENST00000600456 AMOTL2Q9Y2J4 779 aa20.01■□□□□ 0.79
SNRPA-208ENST00000600456 SETD1AO15047 1707 aaKnown RBP20.01■□□□□ 0.79
SNRPA-208ENST00000600456 PTPRUQ92729 1446 aa20.01■□□□□ 0.79
SNRPA-208ENST00000600456 PROSER2Q86WR7 435 aaPredicted RBP20■□□□□ 0.79
SNRPA-208ENST00000600456 LAMC1P11047 1609 aa19.99■□□□□ 0.79
SNRPA-208ENST00000600456 FBXO41Q8TF61 875 aa19.99■□□□□ 0.79
SNRPA-208ENST00000600456 C14orf93Q9H972 538 aaKnown RBP19.99■□□□□ 0.79
SNRPA-208ENST00000600456 KDM2AQ9Y2K7 1162 aa19.99■□□□□ 0.79
SNRPA-208ENST00000600456 PRAG1Q86YV5 1406 aa19.99■□□□□ 0.79
SNRPA-208ENST00000600456 NCOA3Q9Y6Q9 1424 aa19.99■□□□□ 0.79
SNRPA-208ENST00000600456 XRN1Q8IZH2 1706 aaKnown RBP19.99■□□□□ 0.79
SNRPA-208ENST00000600456 TMEM94Q12767 1356 aa19.98■□□□□ 0.79
SNRPA-208ENST00000600456 NEUROD1Q13562 356 aa19.97■□□□□ 0.79
SNRPA-208ENST00000600456 CLSPNQ9HAW4 1339 aa19.96■□□□□ 0.79
SNRPA-208ENST00000600456 PTCH1Q13635 1447 aa19.95■□□□□ 0.78
SNRPA-208ENST00000600456 CFAP70Q5T0N1 1121 aa19.94■□□□□ 0.78
SNRPA-208ENST00000600456 L3MBTL2Q969R5 705 aa19.94■□□□□ 0.78
SNRPA-208ENST00000600456 LRPPRCP42704 1394 aaKnown RBP19.93■□□□□ 0.78
SNRPA-208ENST00000600456 ASXL1Q8IXJ9 1541 aa19.92■□□□□ 0.78
SNRPA-208ENST00000600456 UBAP1LF5GYI3 381 aa19.92■□□□□ 0.78
SNRPA-208ENST00000600456 TOM1O60784 492 aa19.92■□□□□ 0.78
SNRPA-208ENST00000600456 TECPR2O15040 1411 aa19.92■□□□□ 0.78
SNRPA-208ENST00000600456 XIRP1Q702N8 1843 aaKnown RBP19.91■□□□□ 0.78
SNRPA-208ENST00000600456 MSH6P52701 1360 aa19.91■□□□□ 0.78
SNRPA-208ENST00000600456 ABCC11Q96J66 1382 aa19.91■□□□□ 0.78
SNRPA-208ENST00000600456 TMEM132EQ6IEE7 984 aa19.9■□□□□ 0.78
SNRPA-208ENST00000600456 YTHDC2Q9H6S0 1430 aaKnown RBP19.9■□□□□ 0.78
SNRPA-208ENST00000600456 RBM33Q96EV2 1170 aaKnown RBP19.89■□□□□ 0.77
SNRPA-208ENST00000600456 TONSLQ96HA7 1378 aa19.89■□□□□ 0.77
SNRPA-208ENST00000600456 ADGRB1O14514 1584 aa19.88■□□□□ 0.77
SNRPA-208ENST00000600456 ROBO2Q9HCK4 1378 aa19.88■□□□□ 0.77
SNRPA-208ENST00000600456 C14orf37Q86TY3 774 aa19.88■□□□□ 0.77
SNRPA-208ENST00000600456 SIRT1Q96EB6 747 aa19.87■□□□□ 0.77
SNRPA-208ENST00000600456 C19orf44Q9H6X5 657 aa19.87■□□□□ 0.77
SNRPA-208ENST00000600456 KNDC1Q76NI1 1749 aa19.87■□□□□ 0.77
SNRPA-208ENST00000600456 KIAA1210Q9ULL0 1709 aa19.86■□□□□ 0.77
SNRPA-208ENST00000600456 STK26Q9P289 416 aa19.86■□□□□ 0.77
SNRPA-208ENST00000600456 ILDR1Q86SU0 546 aaPredicted RBP19.85■□□□□ 0.77
SNRPA-208ENST00000600456 DCCP43146 1447 aa19.85■□□□□ 0.77
SNRPA-208ENST00000600456 FAM135BQ49AJ0 1406 aa19.85■□□□□ 0.77
SNRPA-208ENST00000600456 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
SNRPA-208ENST00000600456 CCER1Q8TC90 406 aaPredicted RBP19.84■□□□□ 0.77
SNRPA-208ENST00000600456 DLC1Q96QB1 1528 aa19.83■□□□□ 0.77
SNRPA-208ENST00000600456 CADPS2Q86UW7 1296 aa19.83■□□□□ 0.77
SNRPA-208ENST00000600456 TIMELESSQ9UNS1 1208 aa19.82■□□□□ 0.76
SNRPA-208ENST00000600456 ATF3P18847 181 aa19.81■□□□□ 0.76
SNRPA-208ENST00000600456 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.79■□□□□ 0.76
SNRPA-208ENST00000600456 PIP4K2BP78356 416 aa19.78■□□□□ 0.76
SNRPA-208ENST00000600456 WAPLQ7Z5K2 1190 aa19.78■□□□□ 0.76
SNRPA-208ENST00000600456 NALCNQ8IZF0 1738 aa19.77■□□□□ 0.76
SNRPA-208ENST00000600456 SLAIN2Q9P270 581 aa19.77■□□□□ 0.76
SNRPA-208ENST00000600456 TRAK1Q9UPV9 953 aa19.77■□□□□ 0.76
SNRPA-208ENST00000600456 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
SNRPA-208ENST00000600456 PLEKHH1Q9ULM0 1364 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms