RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 ARHGAP23Q9P227 1491 aa27.53■■■□□ 2
COPE-209ENST00000599964 ANKLE2Q86XL3 938 aa27.53■■■□□ 2
COPE-209ENST00000599964 RIMS2Q9UQ26 1411 aa27.52■■■□□ 2
COPE-209ENST00000599964 PPP1R15AO75807 674 aaPredicted RBP27.5■■□□□ 1.99
COPE-209ENST00000599964 TXNDC2Q86VQ3 553 aa27.5■■□□□ 1.99
COPE-209ENST00000599964 ZFYVE9O95405 1425 aa27.49■■□□□ 1.99
COPE-209ENST00000599964 SCAF11Q99590 1463 aaKnown RBP27.48■■□□□ 1.99
COPE-209ENST00000599964 NEXMIFQ5QGS0 1516 aa27.47■■□□□ 1.99
COPE-209ENST00000599964 VGFO15240 615 aaPredicted RBP27.47■■□□□ 1.99
COPE-209ENST00000599964 POLR1AO95602 1720 aaPredicted RBP27.47■■□□□ 1.99
COPE-209ENST00000599964 STAC3Q96MF2 364 aa27.46■■□□□ 1.99
COPE-209ENST00000599964 TONSLQ96HA7 1378 aa27.46■■□□□ 1.99
COPE-209ENST00000599964 PPLO60437 1756 aa27.45■■□□□ 1.99
COPE-209ENST00000599964 LTKP29376 864 aa27.43■■□□□ 1.98
COPE-209ENST00000599964 IFT172Q9UG01 1749 aa27.43■■□□□ 1.98
COPE-209ENST00000599964 DCAF11Q8TEB1 546 aa27.42■■□□□ 1.98
COPE-209ENST00000599964 NCKAP5LQ9HCH0 1330 aa27.41■■□□□ 1.98
COPE-209ENST00000599964 NUTM2DQ5VT03 806 aaPredicted RBP27.4■■□□□ 1.98
COPE-209ENST00000599964 TIMELESSQ9UNS1 1208 aa27.4■■□□□ 1.98
COPE-209ENST00000599964 DMRT2Q9Y5R5 561 aa27.39■■□□□ 1.98
COPE-209ENST00000599964 MED14O60244 1454 aa27.38■■□□□ 1.97
COPE-209ENST00000599964 MYOM2P54296 1465 aa27.38■■□□□ 1.97
COPE-209ENST00000599964 PLEKHG1Q9ULL1 1385 aa27.38■■□□□ 1.97
COPE-209ENST00000599964 L3MBTL2Q969R5 705 aa27.38■■□□□ 1.97
COPE-209ENST00000599964 BCANQ96GW7 911 aa27.38■■□□□ 1.97
COPE-209ENST00000599964 STRCQ7RTU9 1775 aa27.37■■□□□ 1.97
COPE-209ENST00000599964 NPHP4O75161 1426 aaPredicted RBP27.37■■□□□ 1.97
COPE-209ENST00000599964 KDM2AQ9Y2K7 1162 aa27.36■■□□□ 1.97
COPE-209ENST00000599964 IQGAP1P46940 1657 aa27.34■■□□□ 1.97
COPE-209ENST00000599964 ADGRF5Q8IZF2 1346 aa27.31■■□□□ 1.96
COPE-209ENST00000599964 SETBP1Q9Y6X0 1596 aa27.31■■□□□ 1.96
COPE-209ENST00000599964 NRXN1Q9ULB1 1477 aa27.29■■□□□ 1.96
COPE-209ENST00000599964 DIP2AQ14689 1571 aa27.27■■□□□ 1.96
COPE-209ENST00000599964 PIK3C2GO75747 1445 aa27.27■■□□□ 1.96
COPE-209ENST00000599964 SENP3Q9H4L4 574 aaPredicted RBP27.26■■□□□ 1.95
COPE-209ENST00000599964 LAMC1P11047 1609 aa27.24■■□□□ 1.95
COPE-209ENST00000599964 SLC26A8Q96RN1 970 aa27.24■■□□□ 1.95
COPE-209ENST00000599964 TBX22Q9Y458 520 aa27.24■■□□□ 1.95
COPE-209ENST00000599964 PRAG1Q86YV5 1406 aa27.23■■□□□ 1.95
COPE-209ENST00000599964 NRXN3Q9Y4C0 1643 aa27.23■■□□□ 1.95
COPE-209ENST00000599964 ADAMTS13Q76LX8 1427 aa27.22■■□□□ 1.95
COPE-209ENST00000599964 ALKQ9UM73 1620 aa27.21■■□□□ 1.95
COPE-209ENST00000599964 C14orf93Q9H972 538 aaKnown RBP27.19■■□□□ 1.94
COPE-209ENST00000599964 PIK3R4Q99570 1358 aa27.18■■□□□ 1.94
COPE-209ENST00000599964 KIAA1210Q9ULL0 1709 aa27.17■■□□□ 1.94
COPE-209ENST00000599964 CFAP70Q5T0N1 1121 aa27.16■■□□□ 1.94
COPE-209ENST00000599964 SETD1AO15047 1707 aaKnown RBP27.13■■□□□ 1.93
COPE-209ENST00000599964 METP08581 1390 aa27.1■■□□□ 1.93
COPE-209ENST00000599964 TRPM1Q7Z4N2 1603 aa27.1■■□□□ 1.93
COPE-209ENST00000599964 NBPF8Q3BBV2 869 aa27.1■■□□□ 1.93
COPE-209ENST00000599964 KCNA6P17658 529 aa27.08■■□□□ 1.93
COPE-209ENST00000599964 ZEB1P37275 1124 aaPredicted RBP27.08■■□□□ 1.93
COPE-209ENST00000599964 CHD2O14647 1828 aaKnown RBP27.07■■□□□ 1.92
COPE-209ENST00000599964 RALGAPBQ86X10 1494 aa27.06■■□□□ 1.92
COPE-209ENST00000599964 TMEM132EQ6IEE7 984 aa27.06■■□□□ 1.92
COPE-209ENST00000599964 ROCK2O75116 1388 aaKnown RBP27.06■■□□□ 1.92
COPE-209ENST00000599964 AMOTL2Q9Y2J4 779 aa27.05■■□□□ 1.92
COPE-209ENST00000599964 ADGRB1O14514 1584 aa27.05■■□□□ 1.92
COPE-209ENST00000599964 ZNF335Q9H4Z2 1342 aaPredicted RBP27.04■■□□□ 1.92
COPE-209ENST00000599964 ASXL1Q8IXJ9 1541 aa27.04■■□□□ 1.92
COPE-209ENST00000599964 NWD1Q149M9 1564 aa27.04■■□□□ 1.92
COPE-209ENST00000599964 LRPPRCP42704 1394 aaKnown RBP27.03■■□□□ 1.92
COPE-209ENST00000599964 YTHDC2Q9H6S0 1430 aaKnown RBP27.03■■□□□ 1.92
COPE-209ENST00000599964 NBPF1Q3BBV0 1214 aa27.02■■□□□ 1.92
COPE-209ENST00000599964 PTPRUQ92729 1446 aa27.01■■□□□ 1.91
COPE-209ENST00000599964 STK26Q9P289 416 aa27.01■■□□□ 1.91
COPE-209ENST00000599964 XRN1Q8IZH2 1706 aaKnown RBP27.01■■□□□ 1.91
COPE-209ENST00000599964 NKTRP30414 1462 aaKnown RBP27■■□□□ 1.91
COPE-209ENST00000599964 ABCC11Q96J66 1382 aa27■■□□□ 1.91
COPE-209ENST00000599964 CPS1P31327 1500 aa27■■□□□ 1.91
COPE-209ENST00000599964 GPRASP1Q5JY77 1395 aa26.98■■□□□ 1.91
COPE-209ENST00000599964 CARD11Q9BXL7 1154 aa26.98■■□□□ 1.91
COPE-209ENST00000599964 KNDC1Q76NI1 1749 aa26.98■■□□□ 1.91
COPE-209ENST00000599964 TECPR2O15040 1411 aa26.97■■□□□ 1.91
COPE-209ENST00000599964 PTCH1Q13635 1447 aa26.96■■□□□ 1.91
COPE-209ENST00000599964 STRCP1A6NGW2 1772 aa26.95■■□□□ 1.9
COPE-209ENST00000599964 TRAK1Q9UPV9 953 aa26.95■■□□□ 1.9
COPE-209ENST00000599964 PROSER2Q86WR7 435 aaPredicted RBP26.94■■□□□ 1.9
COPE-209ENST00000599964 SIRT1Q96EB6 747 aa26.94■■□□□ 1.9
COPE-209ENST00000599964 DLC1Q96QB1 1528 aa26.94■■□□□ 1.9
COPE-209ENST00000599964 EIF3AQ14152 1382 aaKnown RBP26.92■■□□□ 1.9
COPE-209ENST00000599964 FAM135BQ49AJ0 1406 aa26.91■■□□□ 1.9
COPE-209ENST00000599964 LTBP4Q8N2S1 1624 aa26.91■■□□□ 1.9
COPE-209ENST00000599964 ROBO2Q9HCK4 1378 aa26.9■■□□□ 1.9
COPE-209ENST00000599964 POGKQ9P215 609 aa26.9■■□□□ 1.9
COPE-209ENST00000599964 LRRC7Q96NW7 1537 aa26.87■■□□□ 1.89
COPE-209ENST00000599964 NCOA3Q9Y6Q9 1424 aa26.87■■□□□ 1.89
COPE-209ENST00000599964 ARHGEF28Q8N1W1 1705 aaKnown RBP26.87■■□□□ 1.89
COPE-209ENST00000599964 PRAM1Q96QH2 718 aa26.86■■□□□ 1.89
COPE-209ENST00000599964 TMEM94Q12767 1356 aa26.85■■□□□ 1.89
COPE-209ENST00000599964 C14orf37Q86TY3 774 aa26.85■■□□□ 1.89
COPE-209ENST00000599964 WAPLQ7Z5K2 1190 aa26.83■■□□□ 1.89
COPE-209ENST00000599964 CENPJQ9HC77 1338 aaPredicted RBP26.82■■□□□ 1.88
COPE-209ENST00000599964 USP47Q96K76 1375 aa26.81■■□□□ 1.88
COPE-209ENST00000599964 SAFB2Q14151 953 aaKnown RBP eCLIP26.79■■□□□ 1.88
COPE-209ENST00000599964 RBM33Q96EV2 1170 aaKnown RBP26.79■■□□□ 1.88
COPE-209ENST00000599964 PLEKHH1Q9ULM0 1364 aa26.79■■□□□ 1.88
COPE-209ENST00000599964 EIF4G2P78344 907 aaKnown RBP eCLIP26.78■■□□□ 1.88
COPE-209ENST00000599964 MSH6P52701 1360 aa26.78■■□□□ 1.88
COPE-209ENST00000599964 IQSEC2Q5JU85 1478 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms