RNA–Protein interactions for RNA: ENST00000599569.2

SSR4P1-203, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 2,260 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-203ENST00000599569 TMF1P82094 1093 aa21.45■■□□□ 1.02
SSR4P1-203ENST00000599569 CLTCL1P53675 1640 aa21.44■■□□□ 1.02
SSR4P1-203ENST00000599569 MADDQ8WXG6 1647 aa21.44■■□□□ 1.02
SSR4P1-203ENST00000599569 REREQ9P2R6 1566 aa21.44■■□□□ 1.02
SSR4P1-203ENST00000599569 PARD3Q8TEW0 1356 aa21.43■■□□□ 1.02
SSR4P1-203ENST00000599569 LRPPRCP42704 1394 aaKnown RBP21.42■■□□□ 1.02
SSR4P1-203ENST00000599569 WASHC2CQ9Y4E1 1318 aa21.42■■□□□ 1.02
SSR4P1-203ENST00000599569 SMG6Q86US8 1419 aaKnown RBP21.41■■□□□ 1.02
SSR4P1-203ENST00000599569 AGLP35573 1532 aa21.39■■□□□ 1.02
SSR4P1-203ENST00000599569 NLRP13Q86W25 1043 aa21.39■■□□□ 1.02
SSR4P1-203ENST00000599569 MLECQ14165 292 aa21.39■■□□□ 1.01
SSR4P1-203ENST00000599569 NEURL4Q96JN8 1562 aa21.38■■□□□ 1.01
SSR4P1-203ENST00000599569 ABCC3O15438 1527 aa21.38■■□□□ 1.01
SSR4P1-203ENST00000599569 PANK3Q9H999 370 aa21.38■■□□□ 1.01
SSR4P1-203ENST00000599569 NUDCQ9Y266 331 aa21.37■■□□□ 1.01
SSR4P1-203ENST00000599569 LMTK2Q8IWU2 1503 aa21.36■■□□□ 1.01
SSR4P1-203ENST00000599569 IQGAP1P46940 1657 aa21.36■■□□□ 1.01
SSR4P1-203ENST00000599569 PPP4R2Q9NY27 417 aa21.36■■□□□ 1.01
SSR4P1-203ENST00000599569 EFCAB6Q5THR3 1501 aa21.36■■□□□ 1.01
SSR4P1-203ENST00000599569 SCAF11Q99590 1463 aaKnown RBP21.34■■□□□ 1.01
SSR4P1-203ENST00000599569 CAMSAP1Q5T5Y3 1602 aa21.31■■□□□ 1
SSR4P1-203ENST00000599569 CC2D1BQ5T0F9 858 aaKnown RBP21.31■■□□□ 1
SSR4P1-203ENST00000599569 NPATQ14207 1427 aa21.31■■□□□ 1
SSR4P1-203ENST00000599569 CDCA8Q53HL2 280 aa21.3■■□□□ 1
SSR4P1-203ENST00000599569 KIAA1210Q9ULL0 1709 aa21.3■■□□□ 1
SSR4P1-203ENST00000599569 UGGT1Q9NYU2 1555 aa21.29■■□□□ 1
SSR4P1-203ENST00000599569 CFAP65Q6ZU64 1925 aaKnown RBP21.29■■□□□ 1
SSR4P1-203ENST00000599569 ZC3H13Q5T200 1668 aaKnown RBP21.29■■□□□ 1
SSR4P1-203ENST00000599569 MYOM2P54296 1465 aa21.28■■□□□ 1
SSR4P1-203ENST00000599569 RNF123Q5XPI4 1314 aa21.28■■□□□ 1
SSR4P1-203ENST00000599569 KIF1BO60333 1816 aa21.27■■□□□ 1
SSR4P1-203ENST00000599569 SENP3-EIF4A1A0A087X0R7 540 aa21.27■■□□□ 1
SSR4P1-203ENST00000599569 EIF3AQ14152 1382 aaKnown RBP21.27■□□□□ 0.99
SSR4P1-203ENST00000599569 CLTCQ00610 1675 aaKnown RBP21.26■□□□□ 0.99
SSR4P1-203ENST00000599569 PPP6R1Q9UPN7 881 aa21.25■□□□□ 0.99
SSR4P1-203ENST00000599569 ADGRF5Q8IZF2 1346 aa21.24■□□□□ 0.99
SSR4P1-203ENST00000599569 CFAP70Q5T0N1 1121 aa21.24■□□□□ 0.99
SSR4P1-203ENST00000599569 RBM19Q9Y4C8 960 aaKnown RBP21.23■□□□□ 0.99
SSR4P1-203ENST00000599569 INSRP06213 1382 aa21.22■□□□□ 0.99
SSR4P1-203ENST00000599569 ARHGAP31Q2M1Z3 1444 aa21.22■□□□□ 0.99
SSR4P1-203ENST00000599569 KNSTRNQ9Y448 316 aa21.22■□□□□ 0.99
SSR4P1-203ENST00000599569 SYNMO15061 1565 aa21.21■□□□□ 0.99
SSR4P1-203ENST00000599569 SLC24A1O60721 1099 aa21.21■□□□□ 0.99
SSR4P1-203ENST00000599569 IFT172Q9UG01 1749 aa21.21■□□□□ 0.99
SSR4P1-203ENST00000599569 FBXO31Q5XUX0 539 aaPredicted RBP21.2■□□□□ 0.98
SSR4P1-203ENST00000599569 ESF1Q9H501 851 aaKnown RBP21.2■□□□□ 0.98
SSR4P1-203ENST00000599569 B4GALNT3Q6L9W6 998 aa21.2■□□□□ 0.98
SSR4P1-203ENST00000599569 NRXN1Q9ULB1 1477 aa21.19■□□□□ 0.98
SSR4P1-203ENST00000599569 MROH2AA6NES4 1674 aa21.19■□□□□ 0.98
SSR4P1-203ENST00000599569 PDE3BQ13370 1112 aa21.18■□□□□ 0.98
SSR4P1-203ENST00000599569 AMER1Q5JTC6 1135 aaPredicted RBP21.18■□□□□ 0.98
SSR4P1-203ENST00000599569 NOS1P29475 1434 aa21.18■□□□□ 0.98
SSR4P1-203ENST00000599569 ADGRB3O60242 1522 aa21.17■□□□□ 0.98
SSR4P1-203ENST00000599569 PREX1Q8TCU6 1659 aa21.16■□□□□ 0.98
SSR4P1-203ENST00000599569 BLMP54132 1417 aaPredicted RBP21.15■□□□□ 0.98
SSR4P1-203ENST00000599569 ZMYM3Q14202 1370 aa21.15■□□□□ 0.98
SSR4P1-203ENST00000599569 CHGAP10645 457 aaKnown RBP21.15■□□□□ 0.98
SSR4P1-203ENST00000599569 SALL2Q9Y467 1007 aaPredicted RBP21.15■□□□□ 0.98
SSR4P1-203ENST00000599569 MYOM1P52179 1685 aa21.14■□□□□ 0.97
SSR4P1-203ENST00000599569 KDM5AP29375 1690 aaKnown RBP21.13■□□□□ 0.97
SSR4P1-203ENST00000599569 ASXL1Q8IXJ9 1541 aa21.13■□□□□ 0.97
SSR4P1-203ENST00000599569 NPC1L1Q9UHC9 1359 aa21.13■□□□□ 0.97
SSR4P1-203ENST00000599569 PPP2R1AP30153 589 aa21.13■□□□□ 0.97
SSR4P1-203ENST00000599569 ERVK-7P63135 1459 aa21.12■□□□□ 0.97
SSR4P1-203ENST00000599569 SBNO2Q9Y2G9 1366 aa21.1■□□□□ 0.97
SSR4P1-203ENST00000599569 RPGRIP1LQ68CZ1 1315 aa21.1■□□□□ 0.97
SSR4P1-203ENST00000599569 SETBP1Q9Y6X0 1596 aa21.1■□□□□ 0.97
SSR4P1-203ENST00000599569 IDI1Q13907 227 aa21.09■□□□□ 0.97
SSR4P1-203ENST00000599569 FER1L4A9Z1Z3 1794 aa21.09■□□□□ 0.97
SSR4P1-203ENST00000599569 PIK3C2BO00750 1634 aa21.09■□□□□ 0.97
SSR4P1-203ENST00000599569 CEBPAP49715 358 aaPredicted RBP21.09■□□□□ 0.97
SSR4P1-203ENST00000599569 PIK3C2GO75747 1445 aa21.09■□□□□ 0.97
SSR4P1-203ENST00000599569 C14orf93Q9H972 538 aaKnown RBP21.08■□□□□ 0.97
SSR4P1-203ENST00000599569 PPLO60437 1756 aa21.08■□□□□ 0.97
SSR4P1-203ENST00000599569 MYO3AQ8NEV4 1616 aa21.08■□□□□ 0.97
SSR4P1-203ENST00000599569 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.96
SSR4P1-203ENST00000599569 RCAN3Q9UKA8 241 aa21.08■□□□□ 0.96
SSR4P1-203ENST00000599569 ADAMTS8Q9UP79 889 aa21.08■□□□□ 0.96
SSR4P1-203ENST00000599569 SPATA31D1Q6ZQQ2 1576 aa21.06■□□□□ 0.96
SSR4P1-203ENST00000599569 RRP1P56182 461 aaKnown RBP21.06■□□□□ 0.96
SSR4P1-203ENST00000599569 CDCA7LQ96GN5 454 aa21.06■□□□□ 0.96
SSR4P1-203ENST00000599569 SLC52A1Q9NWF4 448 aa21.06■□□□□ 0.96
SSR4P1-203ENST00000599569 CENPJQ9HC77 1338 aaPredicted RBP21.05■□□□□ 0.96
SSR4P1-203ENST00000599569 CCDC136Q96JN2 1154 aa21.04■□□□□ 0.96
SSR4P1-203ENST00000599569 WDR43Q15061 677 aaKnown RBP eCLIP21.04■□□□□ 0.96
SSR4P1-203ENST00000599569 TRAK1Q9UPV9 953 aa21.02■□□□□ 0.96
SSR4P1-203ENST00000599569 ADGRB1O14514 1584 aa21.02■□□□□ 0.96
SSR4P1-203ENST00000599569 C3P01024 1663 aa21.02■□□□□ 0.96
SSR4P1-203ENST00000599569 CARD14Q9BXL6 1004 aa21.01■□□□□ 0.95
SSR4P1-203ENST00000599569 RIMS1Q86UR5 1692 aaKnown RBP20.99■□□□□ 0.95
SSR4P1-203ENST00000599569 ADAMTSL3P82987 1691 aa20.99■□□□□ 0.95
SSR4P1-203ENST00000599569 MYO5BQ9ULV0 1848 aa20.99■□□□□ 0.95
SSR4P1-203ENST00000599569 TNRQ92752 1358 aa20.98■□□□□ 0.95
SSR4P1-203ENST00000599569 VGFO15240 615 aaPredicted RBP20.98■□□□□ 0.95
SSR4P1-203ENST00000599569 TMEM132EQ6IEE7 984 aa20.98■□□□□ 0.95
SSR4P1-203ENST00000599569 TMEM131LA2VDJ0 1609 aa20.98■□□□□ 0.95
SSR4P1-203ENST00000599569 NUTM2DQ5VT03 806 aaPredicted RBP20.97■□□□□ 0.95
SSR4P1-203ENST00000599569 STAG3Q9UJ98 1225 aa20.95■□□□□ 0.95
SSR4P1-203ENST00000599569 FANCIQ9NVI1 1328 aa20.95■□□□□ 0.94
SSR4P1-203ENST00000599569 NEXMIFQ5QGS0 1516 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms