RNA–Protein interactions for RNA: ENST00000599479.1

TMEM38A-203, Transcript of transmembrane protein 38A, humanhuman

TSL 3

Gene TMEM38A, Length 410 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-203ENST00000599479 IQGAP1P46940 1657 aa18.08■□□□□ 0.48
TMEM38A-203ENST00000599479 PLEKHG1Q9ULL1 1385 aa18.07■□□□□ 0.48
TMEM38A-203ENST00000599479 FBXO41Q8TF61 875 aa18.06■□□□□ 0.48
TMEM38A-203ENST00000599479 CLTCL1P53675 1640 aa18.05■□□□□ 0.48
TMEM38A-203ENST00000599479 IQSEC2Q5JU85 1478 aa18.04■□□□□ 0.48
TMEM38A-203ENST00000599479 TBX22Q9Y458 520 aa18.04■□□□□ 0.48
TMEM38A-203ENST00000599479 ILDR1Q86SU0 546 aaPredicted RBP18.03■□□□□ 0.48
TMEM38A-203ENST00000599479 SLC26A8Q96RN1 970 aa18.03■□□□□ 0.48
TMEM38A-203ENST00000599479 RPGRIP1LQ68CZ1 1315 aa18.02■□□□□ 0.48
TMEM38A-203ENST00000599479 MYO5BQ9ULV0 1848 aa18.02■□□□□ 0.47
TMEM38A-203ENST00000599479 CPS1P31327 1500 aa18.02■□□□□ 0.47
TMEM38A-203ENST00000599479 CCDC144AA2RUR9 1427 aa18■□□□□ 0.47
TMEM38A-203ENST00000599479 SPATA31E1Q6ZUB1 1445 aa18■□□□□ 0.47
TMEM38A-203ENST00000599479 ADAMTS13Q76LX8 1427 aa18■□□□□ 0.47
TMEM38A-203ENST00000599479 PPP1R15AO75807 674 aaPredicted RBP18■□□□□ 0.47
TMEM38A-203ENST00000599479 KCNA6P17658 529 aa18■□□□□ 0.47
TMEM38A-203ENST00000599479 ZNF326Q5BKZ1 582 aaKnown RBP18■□□□□ 0.47
TMEM38A-203ENST00000599479 NUTM2DQ5VT03 806 aaPredicted RBP18■□□□□ 0.47
TMEM38A-203ENST00000599479 ANKRD30BQ9BXX2 1392 aa18■□□□□ 0.47
TMEM38A-203ENST00000599479 TRIM26Q12899 539 aaPredicted RBP17.99■□□□□ 0.47
TMEM38A-203ENST00000599479 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
TMEM38A-203ENST00000599479 VGFO15240 615 aaPredicted RBP17.97■□□□□ 0.47
TMEM38A-203ENST00000599479 PIK3R4Q99570 1358 aa17.96■□□□□ 0.47
TMEM38A-203ENST00000599479 LRRC7Q96NW7 1537 aa17.95■□□□□ 0.46
TMEM38A-203ENST00000599479 BCANQ96GW7 911 aa17.95■□□□□ 0.46
TMEM38A-203ENST00000599479 KIF1BO60333 1816 aa17.94■□□□□ 0.46
TMEM38A-203ENST00000599479 STRCP1A6NGW2 1772 aa17.94■□□□□ 0.46
TMEM38A-203ENST00000599479 SETBP1Q9Y6X0 1596 aa17.93■□□□□ 0.46
TMEM38A-203ENST00000599479 RGL3Q3MIN7 710 aa17.91■□□□□ 0.46
TMEM38A-203ENST00000599479 DIP2AQ14689 1571 aa17.91■□□□□ 0.46
TMEM38A-203ENST00000599479 SENP3Q9H4L4 574 aaPredicted RBP17.9■□□□□ 0.46
TMEM38A-203ENST00000599479 NRXN3Q9Y4C0 1643 aa17.9■□□□□ 0.46
TMEM38A-203ENST00000599479 NWD1Q149M9 1564 aa17.89■□□□□ 0.45
TMEM38A-203ENST00000599479 ADGRF5Q8IZF2 1346 aa17.88■□□□□ 0.45
TMEM38A-203ENST00000599479 METP08581 1390 aa17.88■□□□□ 0.45
TMEM38A-203ENST00000599479 PTPRUQ92729 1446 aa17.88■□□□□ 0.45
TMEM38A-203ENST00000599479 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
TMEM38A-203ENST00000599479 PROSER2Q86WR7 435 aaPredicted RBP17.87■□□□□ 0.45
TMEM38A-203ENST00000599479 UBAP1LF5GYI3 381 aa17.86■□□□□ 0.45
TMEM38A-203ENST00000599479 AMOTL2Q9Y2J4 779 aa17.86■□□□□ 0.45
TMEM38A-203ENST00000599479 TMEM94Q12767 1356 aa17.86■□□□□ 0.45
TMEM38A-203ENST00000599479 NCOA3Q9Y6Q9 1424 aa17.86■□□□□ 0.45
TMEM38A-203ENST00000599479 CHD2O14647 1828 aaKnown RBP17.86■□□□□ 0.45
TMEM38A-203ENST00000599479 TOM1O60784 492 aa17.85■□□□□ 0.45
TMEM38A-203ENST00000599479 STAC3Q96MF2 364 aa17.84■□□□□ 0.45
TMEM38A-203ENST00000599479 PPLO60437 1756 aa17.84■□□□□ 0.45
TMEM38A-203ENST00000599479 NRXN1Q9ULB1 1477 aa17.82■□□□□ 0.44
TMEM38A-203ENST00000599479 ALKQ9UM73 1620 aa17.82■□□□□ 0.44
TMEM38A-203ENST00000599479 RBM33Q96EV2 1170 aaKnown RBP17.81■□□□□ 0.44
TMEM38A-203ENST00000599479 C14orf93Q9H972 538 aaKnown RBP17.81■□□□□ 0.44
TMEM38A-203ENST00000599479 PIK3C2GO75747 1445 aa17.81■□□□□ 0.44
TMEM38A-203ENST00000599479 PRAG1Q86YV5 1406 aa17.81■□□□□ 0.44
TMEM38A-203ENST00000599479 DHX57Q6P158 1386 aaKnown RBP17.8■□□□□ 0.44
TMEM38A-203ENST00000599479 MYOM2P54296 1465 aa17.8■□□□□ 0.44
TMEM38A-203ENST00000599479 IFT172Q9UG01 1749 aa17.79■□□□□ 0.44
TMEM38A-203ENST00000599479 XIRP1Q702N8 1843 aaKnown RBP17.79■□□□□ 0.44
TMEM38A-203ENST00000599479 SETD1AO15047 1707 aaKnown RBP17.78■□□□□ 0.44
TMEM38A-203ENST00000599479 C19orf44Q9H6X5 657 aa17.77■□□□□ 0.44
TMEM38A-203ENST00000599479 XRN1Q8IZH2 1706 aaKnown RBP17.77■□□□□ 0.44
TMEM38A-203ENST00000599479 DCAF11Q8TEB1 546 aa17.75■□□□□ 0.43
TMEM38A-203ENST00000599479 CFAP70Q5T0N1 1121 aa17.74■□□□□ 0.43
TMEM38A-203ENST00000599479 MSH6P52701 1360 aa17.74■□□□□ 0.43
TMEM38A-203ENST00000599479 ABCC11Q96J66 1382 aa17.74■□□□□ 0.43
TMEM38A-203ENST00000599479 PTCH1Q13635 1447 aa17.73■□□□□ 0.43
TMEM38A-203ENST00000599479 SIRT1Q96EB6 747 aa17.73■□□□□ 0.43
TMEM38A-203ENST00000599479 ROBO2Q9HCK4 1378 aa17.73■□□□□ 0.43
TMEM38A-203ENST00000599479 TECPR2O15040 1411 aa17.72■□□□□ 0.43
TMEM38A-203ENST00000599479 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
TMEM38A-203ENST00000599479 LRPPRCP42704 1394 aaKnown RBP17.72■□□□□ 0.43
TMEM38A-203ENST00000599479 PIP4K2BP78356 416 aa17.72■□□□□ 0.43
TMEM38A-203ENST00000599479 TMEM132EQ6IEE7 984 aa17.72■□□□□ 0.43
TMEM38A-203ENST00000599479 SIN3AQ96ST3 1273 aa17.72■□□□□ 0.43
TMEM38A-203ENST00000599479 SLAIN2Q9P270 581 aa17.71■□□□□ 0.43
TMEM38A-203ENST00000599479 KDM2AQ9Y2K7 1162 aa17.71■□□□□ 0.43
TMEM38A-203ENST00000599479 CADPS2Q86UW7 1296 aa17.7■□□□□ 0.42
TMEM38A-203ENST00000599479 ASXL1Q8IXJ9 1541 aa17.7■□□□□ 0.42
TMEM38A-203ENST00000599479 DCCP43146 1447 aa17.68■□□□□ 0.42
TMEM38A-203ENST00000599479 YTHDC2Q9H6S0 1430 aaKnown RBP17.68■□□□□ 0.42
TMEM38A-203ENST00000599479 C14orf37Q86TY3 774 aa17.67■□□□□ 0.42
TMEM38A-203ENST00000599479 L3MBTL2Q969R5 705 aa17.67■□□□□ 0.42
TMEM38A-203ENST00000599479 ADGRL3Q9HAR2 1447 aa17.66■□□□□ 0.42
TMEM38A-203ENST00000599479 ATF3P18847 181 aa17.66■□□□□ 0.42
TMEM38A-203ENST00000599479 HSPA1LP34931 641 aa17.66■□□□□ 0.42
TMEM38A-203ENST00000599479 PCGF6Q9BYE7 350 aa17.66■□□□□ 0.42
TMEM38A-203ENST00000599479 ADGRB1O14514 1584 aa17.66■□□□□ 0.42
TMEM38A-203ENST00000599479 STK26Q9P289 416 aa17.65■□□□□ 0.42
TMEM38A-203ENST00000599479 WAPLQ7Z5K2 1190 aa17.64■□□□□ 0.41
TMEM38A-203ENST00000599479 SCAF1Q9H7N4 1312 aaKnown RBP17.64■□□□□ 0.41
TMEM38A-203ENST00000599479 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
TMEM38A-203ENST00000599479 LAMC1P11047 1609 aa17.63■□□□□ 0.41
TMEM38A-203ENST00000599479 NEUROD1Q13562 356 aa17.62■□□□□ 0.41
TMEM38A-203ENST00000599479 PLEKHH1Q9ULM0 1364 aa17.61■□□□□ 0.41
TMEM38A-203ENST00000599479 MST1RQ04912 1400 aa17.6■□□□□ 0.41
TMEM38A-203ENST00000599479 DLC1Q96QB1 1528 aa17.59■□□□□ 0.41
TMEM38A-203ENST00000599479 KNDC1Q76NI1 1749 aa17.58■□□□□ 0.41
TMEM38A-203ENST00000599479 BRINP3Q76B58 766 aa17.58■□□□□ 0.4
TMEM38A-203ENST00000599479 NBPF1Q3BBV0 1214 aa17.57■□□□□ 0.4
TMEM38A-203ENST00000599479 PRAM1Q96QH2 718 aa17.57■□□□□ 0.4
TMEM38A-203ENST00000599479 NALCNQ8IZF0 1738 aa17.56■□□□□ 0.4
TMEM38A-203ENST00000599479 TRAK1Q9UPV9 953 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms