RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 SENP3Q9H4L4 574 aaPredicted RBP29.43■■■□□ 2.3
IRF3-221ENST00000598808 NUTM2DQ5VT03 806 aaPredicted RBP29.42■■■□□ 2.3
IRF3-221ENST00000598808 LTBP4Q8N2S1 1624 aa29.41■■■□□ 2.3
IRF3-221ENST00000598808 LTKP29376 864 aa29.41■■■□□ 2.3
IRF3-221ENST00000598808 CERKQ8TCT0 537 aa29.41■■■□□ 2.3
IRF3-221ENST00000598808 BCANQ96GW7 911 aa29.41■■■□□ 2.3
IRF3-221ENST00000598808 NPHP4O75161 1426 aaPredicted RBP29.41■■■□□ 2.3
IRF3-221ENST00000598808 IQGAP1P46940 1657 aa29.39■■■□□ 2.29
IRF3-221ENST00000598808 HDGFP51858 240 aaKnown RBP29.38■■■□□ 2.29
IRF3-221ENST00000598808 ANKRD30BQ9BXX2 1392 aa29.38■■■□□ 2.29
IRF3-221ENST00000598808 FBXO41Q8TF61 875 aa29.37■■■□□ 2.29
IRF3-221ENST00000598808 ZFYVE9O95405 1425 aa29.36■■■□□ 2.29
IRF3-221ENST00000598808 RGL3Q3MIN7 710 aa29.36■■■□□ 2.29
IRF3-221ENST00000598808 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.36■■■□□ 2.29
IRF3-221ENST00000598808 MED14O60244 1454 aa29.34■■■□□ 2.29
IRF3-221ENST00000598808 DHX57Q6P158 1386 aaKnown RBP29.33■■■□□ 2.29
IRF3-221ENST00000598808 ZNF335Q9H4Z2 1342 aaPredicted RBP29.32■■■□□ 2.28
IRF3-221ENST00000598808 NEXMIFQ5QGS0 1516 aa29.3■■■□□ 2.28
IRF3-221ENST00000598808 SPATA31E1Q6ZUB1 1445 aa29.27■■■□□ 2.28
IRF3-221ENST00000598808 PLEKHG1Q9ULL1 1385 aa29.26■■■□□ 2.27
IRF3-221ENST00000598808 SLC26A8Q96RN1 970 aa29.24■■■□□ 2.27
IRF3-221ENST00000598808 PPLO60437 1756 aa29.23■■■□□ 2.27
IRF3-221ENST00000598808 RPGRIP1LQ68CZ1 1315 aa29.23■■■□□ 2.27
IRF3-221ENST00000598808 IQSEC2Q5JU85 1478 aa29.19■■■□□ 2.26
IRF3-221ENST00000598808 VGFO15240 615 aaPredicted RBP29.19■■■□□ 2.26
IRF3-221ENST00000598808 NEUROD1Q13562 356 aa29.18■■■□□ 2.26
IRF3-221ENST00000598808 IFT172Q9UG01 1749 aa29.17■■■□□ 2.26
IRF3-221ENST00000598808 SIN3AQ96ST3 1273 aa29.17■■■□□ 2.26
IRF3-221ENST00000598808 DIP2AQ14689 1571 aa29.12■■■□□ 2.25
IRF3-221ENST00000598808 STRCP1A6NGW2 1772 aa29.12■■■□□ 2.25
IRF3-221ENST00000598808 CPS1P31327 1500 aa29.12■■■□□ 2.25
IRF3-221ENST00000598808 SETBP1Q9Y6X0 1596 aa29.12■■■□□ 2.25
IRF3-221ENST00000598808 KDM2AQ9Y2K7 1162 aa29.11■■■□□ 2.25
IRF3-221ENST00000598808 NRXN3Q9Y4C0 1643 aa29.11■■■□□ 2.25
IRF3-221ENST00000598808 DCAF11Q8TEB1 546 aa29.1■■■□□ 2.25
IRF3-221ENST00000598808 ADGRF5Q8IZF2 1346 aa29.1■■■□□ 2.25
IRF3-221ENST00000598808 ADAMTS13Q76LX8 1427 aa29.1■■■□□ 2.25
IRF3-221ENST00000598808 TBX22Q9Y458 520 aa29.06■■■□□ 2.24
IRF3-221ENST00000598808 MYOM2P54296 1465 aa29.06■■■□□ 2.24
IRF3-221ENST00000598808 CCER1Q8TC90 406 aaPredicted RBP29.05■■■□□ 2.24
IRF3-221ENST00000598808 ZEB1P37275 1124 aaPredicted RBP29.04■■■□□ 2.24
IRF3-221ENST00000598808 ALKQ9UM73 1620 aa29.02■■■□□ 2.24
IRF3-221ENST00000598808 PIK3C2GO75747 1445 aa29.01■■■□□ 2.23
IRF3-221ENST00000598808 KCNA6P17658 529 aa29■■■□□ 2.23
IRF3-221ENST00000598808 METP08581 1390 aa28.98■■■□□ 2.23
IRF3-221ENST00000598808 CHD2O14647 1828 aaKnown RBP28.98■■■□□ 2.23
IRF3-221ENST00000598808 NWD1Q149M9 1564 aa28.98■■■□□ 2.23
IRF3-221ENST00000598808 TONSLQ96HA7 1378 aa28.98■■■□□ 2.23
IRF3-221ENST00000598808 PIK3R4Q99570 1358 aa28.97■■■□□ 2.23
IRF3-221ENST00000598808 LRRC7Q96NW7 1537 aa28.97■■■□□ 2.23
IRF3-221ENST00000598808 SETD1AO15047 1707 aaKnown RBP28.96■■■□□ 2.23
IRF3-221ENST00000598808 L3MBTL2Q969R5 705 aa28.96■■■□□ 2.23
IRF3-221ENST00000598808 NRXN1Q9ULB1 1477 aa28.95■■■□□ 2.23
IRF3-221ENST00000598808 AMOTL2Q9Y2J4 779 aa28.94■■■□□ 2.22
IRF3-221ENST00000598808 NKTRP30414 1462 aaKnown RBP28.94■■■□□ 2.22
IRF3-221ENST00000598808 PTPRUQ92729 1446 aa28.93■■■□□ 2.22
IRF3-221ENST00000598808 LAMC1P11047 1609 aa28.93■■■□□ 2.22
IRF3-221ENST00000598808 PROSER2Q86WR7 435 aaPredicted RBP28.93■■■□□ 2.22
IRF3-221ENST00000598808 CFAP70Q5T0N1 1121 aa28.92■■■□□ 2.22
IRF3-221ENST00000598808 STAC3Q96MF2 364 aa28.92■■■□□ 2.22
IRF3-221ENST00000598808 UBAP1LF5GYI3 381 aa28.91■■■□□ 2.22
IRF3-221ENST00000598808 RBM33Q96EV2 1170 aaKnown RBP28.91■■■□□ 2.22
IRF3-221ENST00000598808 XIRP1Q702N8 1843 aaKnown RBP28.89■■■□□ 2.22
IRF3-221ENST00000598808 TMEM132EQ6IEE7 984 aa28.89■■■□□ 2.22
IRF3-221ENST00000598808 STK26Q9P289 416 aa28.89■■■□□ 2.22
IRF3-221ENST00000598808 XRN1Q8IZH2 1706 aaKnown RBP28.89■■■□□ 2.21
IRF3-221ENST00000598808 C14orf37Q86TY3 774 aa28.88■■■□□ 2.21
IRF3-221ENST00000598808 TMEM94Q12767 1356 aa28.87■■■□□ 2.21
IRF3-221ENST00000598808 CLSPNQ9HAW4 1339 aa28.87■■■□□ 2.21
IRF3-221ENST00000598808 C14orf93Q9H972 538 aaKnown RBP28.87■■■□□ 2.21
IRF3-221ENST00000598808 ASXL1Q8IXJ9 1541 aa28.86■■■□□ 2.21
IRF3-221ENST00000598808 PRAG1Q86YV5 1406 aa28.85■■■□□ 2.21
IRF3-221ENST00000598808 YTHDC2Q9H6S0 1430 aaKnown RBP28.8■■■□□ 2.2
IRF3-221ENST00000598808 LRPPRCP42704 1394 aaKnown RBP28.79■■■□□ 2.2
IRF3-221ENST00000598808 PTCH1Q13635 1447 aa28.77■■■□□ 2.2
IRF3-221ENST00000598808 TOM1O60784 492 aa28.77■■■□□ 2.2
IRF3-221ENST00000598808 MSH6P52701 1360 aa28.76■■■□□ 2.19
IRF3-221ENST00000598808 ROBO2Q9HCK4 1378 aa28.76■■■□□ 2.19
IRF3-221ENST00000598808 KNDC1Q76NI1 1749 aa28.75■■■□□ 2.19
IRF3-221ENST00000598808 KIAA1210Q9ULL0 1709 aa28.75■■■□□ 2.19
IRF3-221ENST00000598808 ADGRB1O14514 1584 aa28.75■■■□□ 2.19
IRF3-221ENST00000598808 SCAF1Q9H7N4 1312 aaKnown RBP28.74■■■□□ 2.19
IRF3-221ENST00000598808 PIP4K2BP78356 416 aa28.72■■■□□ 2.19
IRF3-221ENST00000598808 TRAK1Q9UPV9 953 aa28.72■■■□□ 2.19
IRF3-221ENST00000598808 ABCC11Q96J66 1382 aa28.7■■■□□ 2.19
IRF3-221ENST00000598808 TRPM1Q7Z4N2 1603 aa28.7■■■□□ 2.19
IRF3-221ENST00000598808 NBPF1Q3BBV0 1214 aa28.7■■■□□ 2.18
IRF3-221ENST00000598808 TECPR2O15040 1411 aa28.69■■■□□ 2.18
IRF3-221ENST00000598808 ROCK2O75116 1388 aaKnown RBP28.69■■■□□ 2.18
IRF3-221ENST00000598808 NBPF8Q3BBV2 869 aa28.68■■■□□ 2.18
IRF3-221ENST00000598808 WAPLQ7Z5K2 1190 aa28.68■■■□□ 2.18
IRF3-221ENST00000598808 NCOA3Q9Y6Q9 1424 aa28.68■■■□□ 2.18
IRF3-221ENST00000598808 SAFB2Q14151 953 aaKnown RBP eCLIP28.67■■■□□ 2.18
IRF3-221ENST00000598808 POGKQ9P215 609 aa28.67■■■□□ 2.18
IRF3-221ENST00000598808 NALCNQ8IZF0 1738 aa28.67■■■□□ 2.18
IRF3-221ENST00000598808 ATF3P18847 181 aa28.66■■■□□ 2.18
IRF3-221ENST00000598808 ADGRL3Q9HAR2 1447 aa28.66■■■□□ 2.18
IRF3-221ENST00000598808 PLEKHH1Q9ULM0 1364 aa28.66■■■□□ 2.18
IRF3-221ENST00000598808 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.65■■■□□ 2.18
IRF3-221ENST00000598808 PRAM1Q96QH2 718 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms