RNA–Protein interactions for RNA: ENST00000598256.1

LTBP4-222, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-222ENST00000598256 TONSLQ96HA7 1378 aa23.05■■□□□ 1.28
LTBP4-222ENST00000598256 STAG3Q9UJ98 1225 aa23.05■■□□□ 1.28
LTBP4-222ENST00000598256 SPATA31E1Q6ZUB1 1445 aa23.05■■□□□ 1.28
LTBP4-222ENST00000598256 IQSEC2Q5JU85 1478 aa23■■□□□ 1.27
LTBP4-222ENST00000598256 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
LTBP4-222ENST00000598256 ZNF326Q5BKZ1 582 aaKnown RBP22.99■■□□□ 1.27
LTBP4-222ENST00000598256 NEXMIFQ5QGS0 1516 aa22.98■■□□□ 1.27
LTBP4-222ENST00000598256 POLR1AO95602 1720 aaPredicted RBP22.96■■□□□ 1.27
LTBP4-222ENST00000598256 SLIT1O75093 1534 aa22.92■■□□□ 1.26
LTBP4-222ENST00000598256 L3MBTL2Q969R5 705 aa22.92■■□□□ 1.26
LTBP4-222ENST00000598256 TIMELESSQ9UNS1 1208 aa22.92■■□□□ 1.26
LTBP4-222ENST00000598256 MYOM2P54296 1465 aa22.92■■□□□ 1.26
LTBP4-222ENST00000598256 RIMS2Q9UQ26 1411 aa22.91■■□□□ 1.26
LTBP4-222ENST00000598256 THEMISQ8N1K5 641 aaPredicted RBP22.91■■□□□ 1.26
LTBP4-222ENST00000598256 RPGRIP1LQ68CZ1 1315 aa22.9■■□□□ 1.26
LTBP4-222ENST00000598256 DCAF11Q8TEB1 546 aa22.9■■□□□ 1.26
LTBP4-222ENST00000598256 ARHGAP23Q9P227 1491 aa22.9■■□□□ 1.26
LTBP4-222ENST00000598256 TMEM2Q9UHN6 1383 aa22.89■■□□□ 1.26
LTBP4-222ENST00000598256 NCKAP5LQ9HCH0 1330 aa22.89■■□□□ 1.26
LTBP4-222ENST00000598256 ZFYVE9O95405 1425 aa22.89■■□□□ 1.25
LTBP4-222ENST00000598256 ZNF335Q9H4Z2 1342 aaPredicted RBP22.88■■□□□ 1.25
LTBP4-222ENST00000598256 ZEB1P37275 1124 aaPredicted RBP22.88■■□□□ 1.25
LTBP4-222ENST00000598256 KDM2AQ9Y2K7 1162 aa22.87■■□□□ 1.25
LTBP4-222ENST00000598256 IQGAP1P46940 1657 aa22.86■■□□□ 1.25
LTBP4-222ENST00000598256 LAMC1P11047 1609 aa22.85■■□□□ 1.25
LTBP4-222ENST00000598256 UBAP1LF5GYI3 381 aa22.84■■□□□ 1.25
LTBP4-222ENST00000598256 PPP1R15AO75807 674 aaPredicted RBP22.84■■□□□ 1.25
LTBP4-222ENST00000598256 SCAF11Q99590 1463 aaKnown RBP22.84■■□□□ 1.25
LTBP4-222ENST00000598256 TRPM1Q7Z4N2 1603 aa22.83■■□□□ 1.25
LTBP4-222ENST00000598256 HDGFP51858 240 aaKnown RBP22.83■■□□□ 1.25
LTBP4-222ENST00000598256 NUTM2DQ5VT03 806 aaPredicted RBP22.83■■□□□ 1.25
LTBP4-222ENST00000598256 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.83■■□□□ 1.25
LTBP4-222ENST00000598256 KIAA1210Q9ULL0 1709 aa22.82■■□□□ 1.24
LTBP4-222ENST00000598256 STAC3Q96MF2 364 aa22.82■■□□□ 1.24
LTBP4-222ENST00000598256 EID1Q9Y6B2 187 aa22.82■■□□□ 1.24
LTBP4-222ENST00000598256 NRXN1Q9ULB1 1477 aa22.81■■□□□ 1.24
LTBP4-222ENST00000598256 VGFO15240 615 aaPredicted RBP22.81■■□□□ 1.24
LTBP4-222ENST00000598256 PRAG1Q86YV5 1406 aa22.81■■□□□ 1.24
LTBP4-222ENST00000598256 NRXN3Q9Y4C0 1643 aa22.8■■□□□ 1.24
LTBP4-222ENST00000598256 TXNDC2Q86VQ3 553 aa22.79■■□□□ 1.24
LTBP4-222ENST00000598256 ADGRF5Q8IZF2 1346 aa22.79■■□□□ 1.24
LTBP4-222ENST00000598256 SETD1AO15047 1707 aaKnown RBP22.78■■□□□ 1.24
LTBP4-222ENST00000598256 PIK3C2GO75747 1445 aa22.78■■□□□ 1.24
LTBP4-222ENST00000598256 SETBP1Q9Y6X0 1596 aa22.78■■□□□ 1.24
LTBP4-222ENST00000598256 ANKLE2Q86XL3 938 aa22.76■■□□□ 1.23
LTBP4-222ENST00000598256 PLEKHG1Q9ULL1 1385 aa22.76■■□□□ 1.23
LTBP4-222ENST00000598256 LTKP29376 864 aa22.75■■□□□ 1.23
LTBP4-222ENST00000598256 SENP3Q9H4L4 574 aaPredicted RBP22.74■■□□□ 1.23
LTBP4-222ENST00000598256 RALGAPBQ86X10 1494 aa22.73■■□□□ 1.23
LTBP4-222ENST00000598256 DIP2AQ14689 1571 aa22.73■■□□□ 1.23
LTBP4-222ENST00000598256 ALKQ9UM73 1620 aa22.73■■□□□ 1.23
LTBP4-222ENST00000598256 BCANQ96GW7 911 aa22.73■■□□□ 1.23
LTBP4-222ENST00000598256 NBPF8Q3BBV2 869 aa22.72■■□□□ 1.23
LTBP4-222ENST00000598256 NPHP4O75161 1426 aaPredicted RBP22.71■■□□□ 1.23
LTBP4-222ENST00000598256 MED14O60244 1454 aa22.71■■□□□ 1.23
LTBP4-222ENST00000598256 HSPA1LP34931 641 aa22.68■■□□□ 1.22
LTBP4-222ENST00000598256 ASXL1Q8IXJ9 1541 aa22.67■■□□□ 1.22
LTBP4-222ENST00000598256 ADAMTS13Q76LX8 1427 aa22.66■■□□□ 1.22
LTBP4-222ENST00000598256 ROCK2O75116 1388 aaKnown RBP22.66■■□□□ 1.22
LTBP4-222ENST00000598256 CFAP70Q5T0N1 1121 aa22.65■■□□□ 1.22
LTBP4-222ENST00000598256 ADGRB1O14514 1584 aa22.64■■□□□ 1.22
LTBP4-222ENST00000598256 KNDC1Q76NI1 1749 aa22.63■■□□□ 1.21
LTBP4-222ENST00000598256 C14orf93Q9H972 538 aaKnown RBP22.63■■□□□ 1.21
LTBP4-222ENST00000598256 CHD2O14647 1828 aaKnown RBP22.62■■□□□ 1.21
LTBP4-222ENST00000598256 MED1Q15648 1581 aaPredicted RBP22.62■■□□□ 1.21
LTBP4-222ENST00000598256 PIP4K2BP78356 416 aa22.61■■□□□ 1.21
LTBP4-222ENST00000598256 ARHGEF28Q8N1W1 1705 aaKnown RBP22.61■■□□□ 1.21
LTBP4-222ENST00000598256 SLC26A8Q96RN1 970 aa22.6■■□□□ 1.21
LTBP4-222ENST00000598256 GPRASP1Q5JY77 1395 aa22.59■■□□□ 1.21
LTBP4-222ENST00000598256 NBPF1Q3BBV0 1214 aa22.58■■□□□ 1.21
LTBP4-222ENST00000598256 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
LTBP4-222ENST00000598256 XRN1Q8IZH2 1706 aaKnown RBP22.57■■□□□ 1.2
LTBP4-222ENST00000598256 CARD11Q9BXL7 1154 aa22.57■■□□□ 1.2
LTBP4-222ENST00000598256 TBX22Q9Y458 520 aa22.57■■□□□ 1.2
LTBP4-222ENST00000598256 METP08581 1390 aa22.56■■□□□ 1.2
LTBP4-222ENST00000598256 TOM1O60784 492 aa22.56■■□□□ 1.2
LTBP4-222ENST00000598256 TMEM132EQ6IEE7 984 aa22.55■■□□□ 1.2
LTBP4-222ENST00000598256 YTHDC2Q9H6S0 1430 aaKnown RBP22.55■■□□□ 1.2
LTBP4-222ENST00000598256 CPS1P31327 1500 aa22.54■■□□□ 1.2
LTBP4-222ENST00000598256 NWD1Q149M9 1564 aa22.54■■□□□ 1.2
LTBP4-222ENST00000598256 PIK3R4Q99570 1358 aa22.53■■□□□ 1.2
LTBP4-222ENST00000598256 QRICH2Q9H0J4 1663 aa22.52■■□□□ 1.2
LTBP4-222ENST00000598256 STRCP1A6NGW2 1772 aa22.51■■□□□ 1.19
LTBP4-222ENST00000598256 DLC1Q96QB1 1528 aa22.51■■□□□ 1.19
LTBP4-222ENST00000598256 LRPPRCP42704 1394 aaKnown RBP22.5■■□□□ 1.19
LTBP4-222ENST00000598256 EIF3AQ14152 1382 aaKnown RBP22.5■■□□□ 1.19
LTBP4-222ENST00000598256 USP47Q96K76 1375 aa22.5■■□□□ 1.19
LTBP4-222ENST00000598256 PTPRUQ92729 1446 aa22.49■■□□□ 1.19
LTBP4-222ENST00000598256 STK26Q9P289 416 aa22.49■■□□□ 1.19
LTBP4-222ENST00000598256 TECPR2O15040 1411 aa22.48■■□□□ 1.19
LTBP4-222ENST00000598256 TRAK1Q9UPV9 953 aa22.47■■□□□ 1.19
LTBP4-222ENST00000598256 EIF4G2P78344 907 aaKnown RBP eCLIP22.45■■□□□ 1.18
LTBP4-222ENST00000598256 ABCC11Q96J66 1382 aa22.45■■□□□ 1.18
LTBP4-222ENST00000598256 NKTRP30414 1462 aaKnown RBP22.44■■□□□ 1.18
LTBP4-222ENST00000598256 PTCH1Q13635 1447 aa22.44■■□□□ 1.18
LTBP4-222ENST00000598256 AMOTL2Q9Y2J4 779 aa22.44■■□□□ 1.18
LTBP4-222ENST00000598256 PHF23Q9BUL5 403 aaPredicted RBP22.41■■□□□ 1.18
LTBP4-222ENST00000598256 FAM135BQ49AJ0 1406 aa22.4■■□□□ 1.18
LTBP4-222ENST00000598256 KCNA6P17658 529 aa22.4■■□□□ 1.18
LTBP4-222ENST00000598256 NALCNQ8IZF0 1738 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms