RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 SYNMO15061 1565 aa26.18■■□□□ 1.78
GRAMD1A-207ENST00000598118 NEURL4Q96JN8 1562 aa26.18■■□□□ 1.78
GRAMD1A-207ENST00000598118 MYOM1P52179 1685 aa26.18■■□□□ 1.78
GRAMD1A-207ENST00000598118 KNSTRNQ9Y448 316 aa26.17■■□□□ 1.78
GRAMD1A-207ENST00000598118 AMER1Q5JTC6 1135 aaPredicted RBP26.17■■□□□ 1.78
GRAMD1A-207ENST00000598118 KIF1BO60333 1816 aa26.16■■□□□ 1.78
GRAMD1A-207ENST00000598118 EFCAB6Q5THR3 1501 aa26.16■■□□□ 1.78
GRAMD1A-207ENST00000598118 MAP3K4Q9Y6R4 1608 aa26.15■■□□□ 1.78
GRAMD1A-207ENST00000598118 PPRC1Q5VV67 1664 aaKnown RBP26.15■■□□□ 1.78
GRAMD1A-207ENST00000598118 CFAP70Q5T0N1 1121 aa26.14■■□□□ 1.78
GRAMD1A-207ENST00000598118 ADGRF5Q8IZF2 1346 aa26.14■■□□□ 1.78
GRAMD1A-207ENST00000598118 PPP2R1AP30153 589 aa26.14■■□□□ 1.77
GRAMD1A-207ENST00000598118 ABCA6Q8N139 1617 aa26.14■■□□□ 1.77
GRAMD1A-207ENST00000598118 CDCA8Q53HL2 280 aa26.13■■□□□ 1.77
GRAMD1A-207ENST00000598118 MROH2AA6NES4 1674 aa26.13■■□□□ 1.77
GRAMD1A-207ENST00000598118 ADAMTS8Q9UP79 889 aa26.13■■□□□ 1.77
GRAMD1A-207ENST00000598118 IFT172Q9UG01 1749 aa26.12■■□□□ 1.77
GRAMD1A-207ENST00000598118 EXOC6Q8TAG9 804 aa26.12■■□□□ 1.77
GRAMD1A-207ENST00000598118 MYOM2P54296 1465 aa26.11■■□□□ 1.77
GRAMD1A-207ENST00000598118 EIF3AQ14152 1382 aaKnown RBP26.1■■□□□ 1.77
GRAMD1A-207ENST00000598118 ZNF518AQ6AHZ1 1483 aa26.1■■□□□ 1.77
GRAMD1A-207ENST00000598118 CFAP65Q6ZU64 1925 aaKnown RBP26.09■■□□□ 1.77
GRAMD1A-207ENST00000598118 ASXL1Q8IXJ9 1541 aa26.09■■□□□ 1.77
GRAMD1A-207ENST00000598118 KDM5AP29375 1690 aaKnown RBP26.09■■□□□ 1.77
GRAMD1A-207ENST00000598118 LMTK2Q8IWU2 1503 aa26.07■■□□□ 1.76
GRAMD1A-207ENST00000598118 ERVK-7P63135 1459 aa26.05■■□□□ 1.76
GRAMD1A-207ENST00000598118 NRXN1Q9ULB1 1477 aa26.02■■□□□ 1.76
GRAMD1A-207ENST00000598118 NPM1P06748 294 aaKnown RBP eCLIP26.02■■□□□ 1.76
GRAMD1A-207ENST00000598118 FRMPD1Q5SYB0 1578 aa26.02■■□□□ 1.76
GRAMD1A-207ENST00000598118 CD109Q6YHK3 1445 aa26.02■■□□□ 1.76
GRAMD1A-207ENST00000598118 PLIN1O60240 522 aa26.01■■□□□ 1.75
GRAMD1A-207ENST00000598118 NPC1L1Q9UHC9 1359 aa26.01■■□□□ 1.75
GRAMD1A-207ENST00000598118 POGZQ7Z3K3 1410 aa26■■□□□ 1.75
GRAMD1A-207ENST00000598118 PLEKHH1Q9ULM0 1364 aa26■■□□□ 1.75
GRAMD1A-207ENST00000598118 WDR43Q15061 677 aaKnown RBP eCLIP26■■□□□ 1.75
GRAMD1A-207ENST00000598118 ADGRB3O60242 1522 aa26■■□□□ 1.75
GRAMD1A-207ENST00000598118 PIK3C2GO75747 1445 aa26■■□□□ 1.75
GRAMD1A-207ENST00000598118 NOS1P29475 1434 aa25.99■■□□□ 1.75
GRAMD1A-207ENST00000598118 OSCARQ8IYS5 282 aa25.98■■□□□ 1.75
GRAMD1A-207ENST00000598118 NPATQ14207 1427 aa25.98■■□□□ 1.75
GRAMD1A-207ENST00000598118 CHGAP10645 457 aaKnown RBP25.97■■□□□ 1.75
GRAMD1A-207ENST00000598118 GGT6Q6P531 493 aa25.97■■□□□ 1.75
GRAMD1A-207ENST00000598118 MYO3AQ8NEV4 1616 aa25.96■■□□□ 1.75
GRAMD1A-207ENST00000598118 MLH3Q9UHC1 1453 aa25.96■■□□□ 1.75
GRAMD1A-207ENST00000598118 CARD14Q9BXL6 1004 aa25.96■■□□□ 1.75
GRAMD1A-207ENST00000598118 CFAP74Q9C0B2 1584 aa25.96■■□□□ 1.75
GRAMD1A-207ENST00000598118 HECW2Q9P2P5 1572 aa25.94■■□□□ 1.74
GRAMD1A-207ENST00000598118 PPLO60437 1756 aa25.94■■□□□ 1.74
GRAMD1A-207ENST00000598118 ZNF521Q96K83 1311 aa25.93■■□□□ 1.74
GRAMD1A-207ENST00000598118 SLC24A1O60721 1099 aa25.92■■□□□ 1.74
GRAMD1A-207ENST00000598118 DUSP27Q5VZP5 1158 aa25.91■■□□□ 1.74
GRAMD1A-207ENST00000598118 ERICH6Q7L0X2 663 aa25.91■■□□□ 1.74
GRAMD1A-207ENST00000598118 SETBP1Q9Y6X0 1596 aa25.91■■□□□ 1.74
GRAMD1A-207ENST00000598118 SBNO2Q9Y2G9 1366 aa25.9■■□□□ 1.74
GRAMD1A-207ENST00000598118 CRBNQ96SW2 442 aa25.89■■□□□ 1.74
GRAMD1A-207ENST00000598118 CCDC146Q8IYE0 955 aa25.88■■□□□ 1.73
GRAMD1A-207ENST00000598118 TRAK1Q9UPV9 953 aa25.88■■□□□ 1.73
GRAMD1A-207ENST00000598118 CENPJQ9HC77 1338 aaPredicted RBP25.88■■□□□ 1.73
GRAMD1A-207ENST00000598118 ABCC3O15438 1527 aa25.87■■□□□ 1.73
GRAMD1A-207ENST00000598118 C20orf194Q5TEA3 1177 aa25.86■■□□□ 1.73
GRAMD1A-207ENST00000598118 C14orf93Q9H972 538 aaKnown RBP25.86■■□□□ 1.73
GRAMD1A-207ENST00000598118 SIGLEC1Q9BZZ2 1709 aa25.86■■□□□ 1.73
GRAMD1A-207ENST00000598118 ADGRB1O14514 1584 aa25.86■■□□□ 1.73
GRAMD1A-207ENST00000598118 RAPGEF3O95398 923 aa25.85■■□□□ 1.73
GRAMD1A-207ENST00000598118 GOLGA2Q08379 1002 aa25.85■■□□□ 1.73
GRAMD1A-207ENST00000598118 ZC3H13Q5T200 1668 aaKnown RBP25.85■■□□□ 1.73
GRAMD1A-207ENST00000598118 TMEM132EQ6IEE7 984 aa25.84■■□□□ 1.73
GRAMD1A-207ENST00000598118 QRICH2Q9H0J4 1663 aa25.84■■□□□ 1.73
GRAMD1A-207ENST00000598118 CAMSAP1Q5T5Y3 1602 aa25.83■■□□□ 1.72
GRAMD1A-207ENST00000598118 APAF1O14727 1248 aa25.81■■□□□ 1.72
GRAMD1A-207ENST00000598118 SLFN5Q08AF3 891 aa25.81■■□□□ 1.72
GRAMD1A-207ENST00000598118 TCERG1O14776 1098 aaKnown RBP25.8■■□□□ 1.72
GRAMD1A-207ENST00000598118 SPINK5Q9NQ38 1064 aaPredicted RBP25.8■■□□□ 1.72
GRAMD1A-207ENST00000598118 PAK3O75914 559 aaPredicted RBP25.78■■□□□ 1.72
GRAMD1A-207ENST00000598118 TRMT2AQ8IZ69 625 aaKnown RBP25.78■■□□□ 1.72
GRAMD1A-207ENST00000598118 SLC12A5Q9H2X9 1139 aa25.78■■□□□ 1.72
GRAMD1A-207ENST00000598118 NOP58Q9Y2X3 529 aaKnown RBP25.78■■□□□ 1.72
GRAMD1A-207ENST00000598118 RPGRIP1LQ68CZ1 1315 aa25.78■■□□□ 1.72
GRAMD1A-207ENST00000598118 NUTM2DQ5VT03 806 aaPredicted RBP25.77■■□□□ 1.72
GRAMD1A-207ENST00000598118 NEO1Q92859 1461 aa25.77■■□□□ 1.72
GRAMD1A-207ENST00000598118 DIP2CQ9Y2E4 1556 aa25.77■■□□□ 1.72
GRAMD1A-207ENST00000598118 NSD3Q9BZ95 1437 aa25.76■■□□□ 1.71
GRAMD1A-207ENST00000598118 PIK3C2BO00750 1634 aa25.76■■□□□ 1.71
GRAMD1A-207ENST00000598118 SKAP1Q86WV1 359 aa25.75■■□□□ 1.71
GRAMD1A-207ENST00000598118 ANP32AP39687 249 aaKnown RBP25.75■■□□□ 1.71
GRAMD1A-207ENST00000598118 IPO9Q96P70 1041 aaKnown RBP25.73■■□□□ 1.71
GRAMD1A-207ENST00000598118 POLR3AO14802 1390 aaPredicted RBP25.73■■□□□ 1.71
GRAMD1A-207ENST00000598118 GLI2P10070 1586 aa25.72■■□□□ 1.71
GRAMD1A-207ENST00000598118 PDE4AP27815 886 aa25.72■■□□□ 1.71
GRAMD1A-207ENST00000598118 DMRT2Q9Y5R5 561 aa25.72■■□□□ 1.71
GRAMD1A-207ENST00000598118 NEXMIFQ5QGS0 1516 aa25.72■■□□□ 1.71
GRAMD1A-207ENST00000598118 RICTORQ6R327 1708 aa25.72■■□□□ 1.71
GRAMD1A-207ENST00000598118 SHPRHQ149N8 1683 aa25.7■■□□□ 1.71
GRAMD1A-207ENST00000598118 ARHGEF28Q8N1W1 1705 aaKnown RBP25.7■■□□□ 1.7
GRAMD1A-207ENST00000598118 MS4A1P11836 297 aa25.69■■□□□ 1.7
GRAMD1A-207ENST00000598118 TNNT2P45379 298 aaPredicted RBP25.69■■□□□ 1.7
GRAMD1A-207ENST00000598118 MORC1Q86VD1 984 aa25.69■■□□□ 1.7
GRAMD1A-207ENST00000598118 BACH2Q9BYV9 841 aa25.68■■□□□ 1.7
GRAMD1A-207ENST00000598118 NKTRP30414 1462 aaKnown RBP25.68■■□□□ 1.7
GRAMD1A-207ENST00000598118 KDM2BQ8NHM5 1336 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms