RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 HDGFP51858 240 aaKnown RBP33.94■■■■□ 3.02
IRF3-220ENST00000598108 SLC26A8Q96RN1 970 aa33.93■■■■□ 3.02
IRF3-220ENST00000598108 TRPM2O94759 1503 aa33.93■■■■□ 3.02
IRF3-220ENST00000598108 PPP1R15AO75807 674 aaPredicted RBP33.91■■■■□ 3.02
IRF3-220ENST00000598108 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.91■■■■□ 3.02
IRF3-220ENST00000598108 MYO5BQ9ULV0 1848 aa33.9■■■■□ 3.02
IRF3-220ENST00000598108 ACIN1Q9UKV3 1341 aaKnown RBP33.9■■■■□ 3.02
IRF3-220ENST00000598108 BCANQ96GW7 911 aa33.89■■■■□ 3.02
IRF3-220ENST00000598108 CLTCL1P53675 1640 aa33.88■■■■□ 3.01
IRF3-220ENST00000598108 PLEKHG1Q9ULL1 1385 aa33.86■■■■□ 3.01
IRF3-220ENST00000598108 ZNF326Q5BKZ1 582 aaKnown RBP33.86■■■■□ 3.01
IRF3-220ENST00000598108 CPS1P31327 1500 aa33.84■■■■□ 3.01
IRF3-220ENST00000598108 IQSEC2Q5JU85 1478 aa33.83■■■■□ 3.01
IRF3-220ENST00000598108 HRCP23327 699 aa33.82■■■■□ 3
IRF3-220ENST00000598108 KCNA6P17658 529 aa33.77■■■■□ 3
IRF3-220ENST00000598108 STRCP1A6NGW2 1772 aa33.77■■■■□ 3
IRF3-220ENST00000598108 TBX22Q9Y458 520 aa33.76■■■□□ 2.99
IRF3-220ENST00000598108 ADAMTS13Q76LX8 1427 aa33.74■■■□□ 2.99
IRF3-220ENST00000598108 LRRC7Q96NW7 1537 aa33.74■■■□□ 2.99
IRF3-220ENST00000598108 UBAP1LF5GYI3 381 aa33.72■■■□□ 2.99
IRF3-220ENST00000598108 CCDC144AA2RUR9 1427 aa33.71■■■□□ 2.99
IRF3-220ENST00000598108 NEXMIFQ5QGS0 1516 aa33.68■■■□□ 2.98
IRF3-220ENST00000598108 RGL3Q3MIN7 710 aa33.66■■■□□ 2.98
IRF3-220ENST00000598108 RPGRIP1LQ68CZ1 1315 aa33.66■■■□□ 2.98
IRF3-220ENST00000598108 RBM33Q96EV2 1170 aaKnown RBP33.64■■■□□ 2.98
IRF3-220ENST00000598108 KIF1BO60333 1816 aa33.64■■■□□ 2.98
IRF3-220ENST00000598108 SPATA31E1Q6ZUB1 1445 aa33.63■■■□□ 2.97
IRF3-220ENST00000598108 VGFO15240 615 aaPredicted RBP33.63■■■□□ 2.97
IRF3-220ENST00000598108 PROSER2Q86WR7 435 aaPredicted RBP33.63■■■□□ 2.97
IRF3-220ENST00000598108 ANKRD30BQ9BXX2 1392 aa33.6■■■□□ 2.97
IRF3-220ENST00000598108 TMEM94Q12767 1356 aa33.6■■■□□ 2.97
IRF3-220ENST00000598108 TOM1O60784 492 aa33.59■■■□□ 2.97
IRF3-220ENST00000598108 SETBP1Q9Y6X0 1596 aa33.57■■■□□ 2.96
IRF3-220ENST00000598108 NWD1Q149M9 1564 aa33.56■■■□□ 2.96
IRF3-220ENST00000598108 METP08581 1390 aa33.56■■■□□ 2.96
IRF3-220ENST00000598108 PIK3R4Q99570 1358 aa33.56■■■□□ 2.96
IRF3-220ENST00000598108 NRXN3Q9Y4C0 1643 aa33.56■■■□□ 2.96
IRF3-220ENST00000598108 DIP2AQ14689 1571 aa33.55■■■□□ 2.96
IRF3-220ENST00000598108 PTPRUQ92729 1446 aa33.55■■■□□ 2.96
IRF3-220ENST00000598108 AMOTL2Q9Y2J4 779 aa33.55■■■□□ 2.96
IRF3-220ENST00000598108 PIP4K2BP78356 416 aa33.54■■■□□ 2.96
IRF3-220ENST00000598108 NKTRP30414 1462 aaKnown RBP33.53■■■□□ 2.96
IRF3-220ENST00000598108 ADGRF5Q8IZF2 1346 aa33.53■■■□□ 2.96
IRF3-220ENST00000598108 ALKQ9UM73 1620 aa33.5■■■□□ 2.95
IRF3-220ENST00000598108 CHD2O14647 1828 aaKnown RBP33.49■■■□□ 2.95
IRF3-220ENST00000598108 SCAF1Q9H7N4 1312 aaKnown RBP33.49■■■□□ 2.95
IRF3-220ENST00000598108 TRIM26Q12899 539 aaPredicted RBP33.47■■■□□ 2.95
IRF3-220ENST00000598108 XIRP1Q702N8 1843 aaKnown RBP33.45■■■□□ 2.95
IRF3-220ENST00000598108 PPLO60437 1756 aa33.44■■■□□ 2.94
IRF3-220ENST00000598108 MSH6P52701 1360 aa33.36■■■□□ 2.93
IRF3-220ENST00000598108 NCOA3Q9Y6Q9 1424 aa33.36■■■□□ 2.93
IRF3-220ENST00000598108 HSPA1LP34931 641 aa33.35■■■□□ 2.93
IRF3-220ENST00000598108 C14orf37Q86TY3 774 aa33.35■■■□□ 2.93
IRF3-220ENST00000598108 XRN1Q8IZH2 1706 aaKnown RBP33.33■■■□□ 2.93
IRF3-220ENST00000598108 PIK3C2GO75747 1445 aa33.32■■■□□ 2.92
IRF3-220ENST00000598108 C19orf44Q9H6X5 657 aa33.32■■■□□ 2.92
IRF3-220ENST00000598108 IFT172Q9UG01 1749 aa33.31■■■□□ 2.92
IRF3-220ENST00000598108 SETD1AO15047 1707 aaKnown RBP33.3■■■□□ 2.92
IRF3-220ENST00000598108 TMEM132EQ6IEE7 984 aa33.29■■■□□ 2.92
IRF3-220ENST00000598108 KDM2AQ9Y2K7 1162 aa33.29■■■□□ 2.92
IRF3-220ENST00000598108 DCAF11Q8TEB1 546 aa33.28■■■□□ 2.92
IRF3-220ENST00000598108 C14orf93Q9H972 538 aaKnown RBP33.28■■■□□ 2.92
IRF3-220ENST00000598108 SLAIN2Q9P270 581 aa33.28■■■□□ 2.92
IRF3-220ENST00000598108 NRXN1Q9ULB1 1477 aa33.27■■■□□ 2.92
IRF3-220ENST00000598108 ROBO2Q9HCK4 1378 aa33.27■■■□□ 2.92
IRF3-220ENST00000598108 MYOM2P54296 1465 aa33.26■■■□□ 2.92
IRF3-220ENST00000598108 DHX57Q6P158 1386 aaKnown RBP33.26■■■□□ 2.92
IRF3-220ENST00000598108 CFAP70Q5T0N1 1121 aa33.26■■■□□ 2.91
IRF3-220ENST00000598108 STK26Q9P289 416 aa33.24■■■□□ 2.91
IRF3-220ENST00000598108 FAM135BQ49AJ0 1406 aa33.24■■■□□ 2.91
IRF3-220ENST00000598108 ATF3P18847 181 aa33.22■■■□□ 2.91
IRF3-220ENST00000598108 CADPS2Q86UW7 1296 aa33.22■■■□□ 2.91
IRF3-220ENST00000598108 PTCH1Q13635 1447 aa33.2■■■□□ 2.91
IRF3-220ENST00000598108 LRPPRCP42704 1394 aaKnown RBP33.2■■■□□ 2.9
IRF3-220ENST00000598108 PRAG1Q86YV5 1406 aa33.19■■■□□ 2.9
IRF3-220ENST00000598108 ASXL1Q8IXJ9 1541 aa33.18■■■□□ 2.9
IRF3-220ENST00000598108 SIN3AQ96ST3 1273 aa33.18■■■□□ 2.9
IRF3-220ENST00000598108 STAC3Q96MF2 364 aa33.17■■■□□ 2.9
IRF3-220ENST00000598108 ABCC11Q96J66 1382 aa33.16■■■□□ 2.9
IRF3-220ENST00000598108 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.16■■■□□ 2.9
IRF3-220ENST00000598108 ADGRL3Q9HAR2 1447 aa33.14■■■□□ 2.9
IRF3-220ENST00000598108 WAPLQ7Z5K2 1190 aa33.14■■■□□ 2.9
IRF3-220ENST00000598108 YTHDC2Q9H6S0 1430 aaKnown RBP33.12■■■□□ 2.89
IRF3-220ENST00000598108 TECPR2O15040 1411 aa33.11■■■□□ 2.89
IRF3-220ENST00000598108 DCCP43146 1447 aa33.11■■■□□ 2.89
IRF3-220ENST00000598108 NEUROD1Q13562 356 aa33.09■■■□□ 2.89
IRF3-220ENST00000598108 PLEKHH1Q9ULM0 1364 aa33.08■■■□□ 2.89
IRF3-220ENST00000598108 ROBO1Q9Y6N7 1651 aa33.07■■■□□ 2.88
IRF3-220ENST00000598108 MST1RQ04912 1400 aa33.05■■■□□ 2.88
IRF3-220ENST00000598108 SIRT1Q96EB6 747 aa33.05■■■□□ 2.88
IRF3-220ENST00000598108 BRINP3Q76B58 766 aa33.04■■■□□ 2.88
IRF3-220ENST00000598108 L3MBTL2Q969R5 705 aa33.04■■■□□ 2.88
IRF3-220ENST00000598108 NALCNQ8IZF0 1738 aa33.02■■■□□ 2.88
IRF3-220ENST00000598108 ADGRB1O14514 1584 aa33■■■□□ 2.87
IRF3-220ENST00000598108 LAMC1P11047 1609 aa32.99■■■□□ 2.87
IRF3-220ENST00000598108 PRAM1Q96QH2 718 aa32.98■■■□□ 2.87
IRF3-220ENST00000598108 TRAK1Q9UPV9 953 aa32.98■■■□□ 2.87
IRF3-220ENST00000598108 PCGF6Q9BYE7 350 aa32.97■■■□□ 2.87
IRF3-220ENST00000598108 C1orf167Q5SNV9 1468 aa32.95■■■□□ 2.87
IRF3-220ENST00000598108 SAFB2Q14151 953 aaKnown RBP eCLIP32.95■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms