RNA–Protein interactions for RNA: ENST00000596765.5

IRF3-213, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-213ENST00000596765 STAG3Q9UJ98 1225 aa19.65■□□□□ 0.74
IRF3-213ENST00000596765 RAB3GAP2Q9H2M9 1393 aa19.65■□□□□ 0.74
IRF3-213ENST00000596765 FOXD1Q16676 465 aa19.64■□□□□ 0.73
IRF3-213ENST00000596765 SLC4A1APQ9BWU0 796 aaKnown RBP19.63■□□□□ 0.73
IRF3-213ENST00000596765 RIMS2Q9UQ26 1411 aa19.61■□□□□ 0.73
IRF3-213ENST00000596765 XIRP1Q702N8 1843 aaKnown RBP19.61■□□□□ 0.73
IRF3-213ENST00000596765 CHGAP10645 457 aaKnown RBP19.6■□□□□ 0.73
IRF3-213ENST00000596765 MPHOSPH9Q99550 1183 aa19.6■□□□□ 0.73
IRF3-213ENST00000596765 ZEB1P37275 1124 aaPredicted RBP19.59■□□□□ 0.73
IRF3-213ENST00000596765 HRCP23327 699 aa19.58■□□□□ 0.72
IRF3-213ENST00000596765 EID1Q9Y6B2 187 aa19.58■□□□□ 0.72
IRF3-213ENST00000596765 IQSEC2Q5JU85 1478 aa19.57■□□□□ 0.72
IRF3-213ENST00000596765 NUTM2DQ5VT03 806 aaPredicted RBP19.57■□□□□ 0.72
IRF3-213ENST00000596765 CCER1Q8TC90 406 aaPredicted RBP19.57■□□□□ 0.72
IRF3-213ENST00000596765 SENP3Q9H4L4 574 aaPredicted RBP19.57■□□□□ 0.72
IRF3-213ENST00000596765 CHD2O14647 1828 aaKnown RBP19.56■□□□□ 0.72
IRF3-213ENST00000596765 NRXN3Q9Y4C0 1643 aa19.56■□□□□ 0.72
IRF3-213ENST00000596765 NEXMIFQ5QGS0 1516 aa19.55■□□□□ 0.72
IRF3-213ENST00000596765 UBAP1LF5GYI3 381 aa19.54■□□□□ 0.72
IRF3-213ENST00000596765 SLC26A8Q96RN1 970 aa19.54■□□□□ 0.72
IRF3-213ENST00000596765 PLEKHG1Q9ULL1 1385 aa19.54■□□□□ 0.72
IRF3-213ENST00000596765 PPLO60437 1756 aa19.53■□□□□ 0.72
IRF3-213ENST00000596765 CPS1P31327 1500 aa19.53■□□□□ 0.72
IRF3-213ENST00000596765 ADAMTS13Q76LX8 1427 aa19.52■□□□□ 0.72
IRF3-213ENST00000596765 ALKQ9UM73 1620 aa19.51■□□□□ 0.71
IRF3-213ENST00000596765 LRRC7Q96NW7 1537 aa19.51■□□□□ 0.71
IRF3-213ENST00000596765 IFT172Q9UG01 1749 aa19.5■□□□□ 0.71
IRF3-213ENST00000596765 NWD1Q149M9 1564 aa19.49■□□□□ 0.71
IRF3-213ENST00000596765 SETD1AO15047 1707 aaKnown RBP19.48■□□□□ 0.71
IRF3-213ENST00000596765 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.47■□□□□ 0.71
IRF3-213ENST00000596765 SPATA31E1Q6ZUB1 1445 aa19.47■□□□□ 0.71
IRF3-213ENST00000596765 SETBP1Q9Y6X0 1596 aa19.46■□□□□ 0.71
IRF3-213ENST00000596765 PPP1R15AO75807 674 aaPredicted RBP19.45■□□□□ 0.7
IRF3-213ENST00000596765 ZNF326Q5BKZ1 582 aaKnown RBP19.45■□□□□ 0.7
IRF3-213ENST00000596765 ANKRD30BQ9BXX2 1392 aa19.44■□□□□ 0.7
IRF3-213ENST00000596765 KCNA6P17658 529 aa19.43■□□□□ 0.7
IRF3-213ENST00000596765 HDGFP51858 240 aaKnown RBP19.43■□□□□ 0.7
IRF3-213ENST00000596765 TBX22Q9Y458 520 aa19.43■□□□□ 0.7
IRF3-213ENST00000596765 DIP2AQ14689 1571 aa19.43■□□□□ 0.7
IRF3-213ENST00000596765 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
IRF3-213ENST00000596765 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
IRF3-213ENST00000596765 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
IRF3-213ENST00000596765 PTPRUQ92729 1446 aa19.42■□□□□ 0.7
IRF3-213ENST00000596765 BCANQ96GW7 911 aa19.41■□□□□ 0.7
IRF3-213ENST00000596765 RBM33Q96EV2 1170 aaKnown RBP19.4■□□□□ 0.7
IRF3-213ENST00000596765 XRN1Q8IZH2 1706 aaKnown RBP19.39■□□□□ 0.7
IRF3-213ENST00000596765 METP08581 1390 aa19.38■□□□□ 0.69
IRF3-213ENST00000596765 RGL3Q3MIN7 710 aa19.38■□□□□ 0.69
IRF3-213ENST00000596765 NKTRP30414 1462 aaKnown RBP19.37■□□□□ 0.69
IRF3-213ENST00000596765 RPGRIP1LQ68CZ1 1315 aa19.36■□□□□ 0.69
IRF3-213ENST00000596765 TOM1O60784 492 aa19.36■□□□□ 0.69
IRF3-213ENST00000596765 PIP4K2BP78356 416 aa19.36■□□□□ 0.69
IRF3-213ENST00000596765 TMEM94Q12767 1356 aa19.35■□□□□ 0.69
IRF3-213ENST00000596765 ADGRF5Q8IZF2 1346 aa19.35■□□□□ 0.69
IRF3-213ENST00000596765 PIK3R4Q99570 1358 aa19.34■□□□□ 0.69
IRF3-213ENST00000596765 CLSPNQ9HAW4 1339 aa19.34■□□□□ 0.69
IRF3-213ENST00000596765 PROSER2Q86WR7 435 aaPredicted RBP19.33■□□□□ 0.68
IRF3-213ENST00000596765 VGFO15240 615 aaPredicted RBP19.32■□□□□ 0.68
IRF3-213ENST00000596765 AMOTL2Q9Y2J4 779 aa19.31■□□□□ 0.68
IRF3-213ENST00000596765 HSPA1LP34931 641 aa19.3■□□□□ 0.68
IRF3-213ENST00000596765 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.3■□□□□ 0.68
IRF3-213ENST00000596765 ASXL1Q8IXJ9 1541 aa19.3■□□□□ 0.68
IRF3-213ENST00000596765 DHX57Q6P158 1386 aaKnown RBP19.29■□□□□ 0.68
IRF3-213ENST00000596765 NRXN1Q9ULB1 1477 aa19.28■□□□□ 0.68
IRF3-213ENST00000596765 PIK3C2GO75747 1445 aa19.27■□□□□ 0.68
IRF3-213ENST00000596765 NALCNQ8IZF0 1738 aa19.25■□□□□ 0.67
IRF3-213ENST00000596765 MYOM2P54296 1465 aa19.25■□□□□ 0.67
IRF3-213ENST00000596765 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
IRF3-213ENST00000596765 NCOA3Q9Y6Q9 1424 aa19.22■□□□□ 0.67
IRF3-213ENST00000596765 ROBO2Q9HCK4 1378 aa19.21■□□□□ 0.67
IRF3-213ENST00000596765 ROBO1Q9Y6N7 1651 aa19.21■□□□□ 0.67
IRF3-213ENST00000596765 PRAG1Q86YV5 1406 aa19.21■□□□□ 0.67
IRF3-213ENST00000596765 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
IRF3-213ENST00000596765 TMEM132EQ6IEE7 984 aa19.19■□□□□ 0.66
IRF3-213ENST00000596765 MED1Q15648 1581 aaPredicted RBP19.19■□□□□ 0.66
IRF3-213ENST00000596765 MSH6P52701 1360 aa19.19■□□□□ 0.66
IRF3-213ENST00000596765 CFAP70Q5T0N1 1121 aa19.18■□□□□ 0.66
IRF3-213ENST00000596765 C14orf93Q9H972 538 aaKnown RBP19.18■□□□□ 0.66
IRF3-213ENST00000596765 LAMC1P11047 1609 aa19.18■□□□□ 0.66
IRF3-213ENST00000596765 PTCH1Q13635 1447 aa19.17■□□□□ 0.66
IRF3-213ENST00000596765 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
IRF3-213ENST00000596765 DCAF11Q8TEB1 546 aa19.16■□□□□ 0.66
IRF3-213ENST00000596765 KDM2AQ9Y2K7 1162 aa19.16■□□□□ 0.66
IRF3-213ENST00000596765 FAM135BQ49AJ0 1406 aa19.16■□□□□ 0.66
IRF3-213ENST00000596765 ADGRB1O14514 1584 aa19.15■□□□□ 0.66
IRF3-213ENST00000596765 C19orf44Q9H6X5 657 aa19.15■□□□□ 0.66
IRF3-213ENST00000596765 TECPR2O15040 1411 aa19.15■□□□□ 0.66
IRF3-213ENST00000596765 LRPPRCP42704 1394 aaKnown RBP19.14■□□□□ 0.65
IRF3-213ENST00000596765 ADGRL3Q9HAR2 1447 aa19.14■□□□□ 0.65
IRF3-213ENST00000596765 SLAIN2Q9P270 581 aa19.13■□□□□ 0.65
IRF3-213ENST00000596765 PLEKHH1Q9ULM0 1364 aa19.13■□□□□ 0.65
IRF3-213ENST00000596765 YTHDC2Q9H6S0 1430 aaKnown RBP19.13■□□□□ 0.65
IRF3-213ENST00000596765 ABCC11Q96J66 1382 aa19.12■□□□□ 0.65
IRF3-213ENST00000596765 STK26Q9P289 416 aa19.12■□□□□ 0.65
IRF3-213ENST00000596765 WAPLQ7Z5K2 1190 aa19.11■□□□□ 0.65
IRF3-213ENST00000596765 C14orf37Q86TY3 774 aa19.11■□□□□ 0.65
IRF3-213ENST00000596765 DCCP43146 1447 aa19.1■□□□□ 0.65
IRF3-213ENST00000596765 MST1RQ04912 1400 aa19.1■□□□□ 0.65
IRF3-213ENST00000596765 RGPD8O14715 1765 aaPredicted RBP19.09■□□□□ 0.65
IRF3-213ENST00000596765 PHLPP1O60346 1717 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms