RNA–Protein interactions for RNA: ENST00000596467.5

FARP1-217, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-217ENST00000596467 TSPY10P0CW01 314 aa13.43□□□□□ -0.26
FARP1-217ENST00000596467 KCNA6P17658 529 aa13.43□□□□□ -0.26
FARP1-217ENST00000596467 TMEM2Q9UHN6 1383 aa13.43□□□□□ -0.26
FARP1-217ENST00000596467 FGD6Q6ZV73 1430 aa13.41□□□□□ -0.26
FARP1-217ENST00000596467 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
FARP1-217ENST00000596467 CDK12Q9NYV4 1490 aaPredicted RBP13.41□□□□□ -0.26
FARP1-217ENST00000596467 SPATA31A6Q5VVP1 1343 aa13.4□□□□□ -0.26
FARP1-217ENST00000596467 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
FARP1-217ENST00000596467 ZNF772Q68DY9 489 aaPredicted RBP13.4□□□□□ -0.26
FARP1-217ENST00000596467 EFCAB6Q5THR3 1501 aa13.39□□□□□ -0.27
FARP1-217ENST00000596467 PROSER2Q86WR7 435 aaPredicted RBP13.39□□□□□ -0.27
FARP1-217ENST00000596467 MSH6P52701 1360 aa13.39□□□□□ -0.27
FARP1-217ENST00000596467 LRP6O75581 1613 aa13.39□□□□□ -0.27
FARP1-217ENST00000596467 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
FARP1-217ENST00000596467 SLAIN2Q9P270 581 aa13.38□□□□□ -0.27
FARP1-217ENST00000596467 AHDC1Q5TGY3 1603 aaPredicted RBP13.37□□□□□ -0.27
FARP1-217ENST00000596467 MYO5BQ9ULV0 1848 aa13.34□□□□□ -0.27
FARP1-217ENST00000596467 NCOA3Q9Y6Q9 1424 aa13.34□□□□□ -0.27
FARP1-217ENST00000596467 RXRBP28702 533 aa13.33□□□□□ -0.28
FARP1-217ENST00000596467 TRIM52Q96A61 297 aa13.33□□□□□ -0.28
FARP1-217ENST00000596467 CROCC2H7BZ55 1655 aa13.33□□□□□ -0.28
FARP1-217ENST00000596467 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.33□□□□□ -0.28
FARP1-217ENST00000596467 ERBINQ96RT1 1412 aa13.32□□□□□ -0.28
FARP1-217ENST00000596467 RBM33Q96EV2 1170 aaKnown RBP13.32□□□□□ -0.28
FARP1-217ENST00000596467 SLC26A8Q96RN1 970 aa13.32□□□□□ -0.28
FARP1-217ENST00000596467 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
FARP1-217ENST00000596467 ADGRB3O60242 1522 aa13.32□□□□□ -0.28
FARP1-217ENST00000596467 LMTK2Q8IWU2 1503 aa13.31□□□□□ -0.28
FARP1-217ENST00000596467 MEX3CQ5U5Q3 659 aaKnown RBP13.31□□□□□ -0.28
FARP1-217ENST00000596467 DIP2AQ14689 1571 aa13.31□□□□□ -0.28
FARP1-217ENST00000596467 IDI1Q13907 227 aa13.29□□□□□ -0.28
FARP1-217ENST00000596467 EP400Q96L91 3159 aa13.28□□□□□ -0.28
FARP1-217ENST00000596467 MYOM3Q5VTT5 1437 aa13.28□□□□□ -0.28
FARP1-217ENST00000596467 NOS1P29475 1434 aa13.27□□□□□ -0.29
FARP1-217ENST00000596467 KANK1Q14678 1352 aa13.26□□□□□ -0.29
FARP1-217ENST00000596467 NHSL1Q5SYE7 1610 aa13.26□□□□□ -0.29
FARP1-217ENST00000596467 GCC2Q8IWJ2 1684 aa13.26□□□□□ -0.29
FARP1-217ENST00000596467 PLEKHG1Q9ULL1 1385 aa13.26□□□□□ -0.29
FARP1-217ENST00000596467 ZFYVE9O95405 1425 aa13.25□□□□□ -0.29
FARP1-217ENST00000596467 KIF15Q9NS87 1388 aa13.25□□□□□ -0.29
FARP1-217ENST00000596467 CADPS2Q86UW7 1296 aa13.25□□□□□ -0.29
FARP1-217ENST00000596467 SLC52A1Q9NWF4 448 aa13.25□□□□□ -0.29
FARP1-217ENST00000596467 RGS12O14924 1447 aa13.23□□□□□ -0.29
FARP1-217ENST00000596467 C19orf44Q9H6X5 657 aa13.23□□□□□ -0.29
FARP1-217ENST00000596467 TMEM131LA2VDJ0 1609 aa13.23□□□□□ -0.29
FARP1-217ENST00000596467 SETD5Q9C0A6 1442 aa13.22□□□□□ -0.29
FARP1-217ENST00000596467 AFF2P51816 1311 aa13.22□□□□□ -0.29
FARP1-217ENST00000596467 SPINK5Q9NQ38 1064 aaPredicted RBP13.22□□□□□ -0.29
FARP1-217ENST00000596467 TBX22Q9Y458 520 aa13.22□□□□□ -0.29
FARP1-217ENST00000596467 PIK3R4Q99570 1358 aa13.21□□□□□ -0.29
FARP1-217ENST00000596467 HDGFP51858 240 aaKnown RBP13.21□□□□□ -0.29
FARP1-217ENST00000596467 RBM6P78332 1123 aaKnown RBP13.21□□□□□ -0.29
FARP1-217ENST00000596467 FKBP8Q14318 412 aa13.21□□□□□ -0.29
FARP1-217ENST00000596467 RPRD2Q5VT52 1461 aaKnown RBP13.21□□□□□ -0.3
FARP1-217ENST00000596467 DCCP43146 1447 aa13.21□□□□□ -0.3
FARP1-217ENST00000596467 ATF3P18847 181 aa13.2□□□□□ -0.3
FARP1-217ENST00000596467 BCANQ96GW7 911 aa13.2□□□□□ -0.3
FARP1-217ENST00000596467 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
FARP1-217ENST00000596467 CAPN15O75808 1086 aa13.18□□□□□ -0.3
FARP1-217ENST00000596467 BRINP3Q76B58 766 aa13.18□□□□□ -0.3
FARP1-217ENST00000596467 C14orf37Q86TY3 774 aa13.18□□□□□ -0.3
FARP1-217ENST00000596467 ABCC5O15440 1437 aa13.18□□□□□ -0.3
FARP1-217ENST00000596467 RIMS2Q9UQ26 1411 aa13.18□□□□□ -0.3
FARP1-217ENST00000596467 ATAD2Q6PL18 1390 aa13.18□□□□□ -0.3
FARP1-217ENST00000596467 ADAMTS13Q76LX8 1427 aa13.17□□□□□ -0.3
FARP1-217ENST00000596467 NUTM2BA6NNL0 878 aaPredicted RBP13.17□□□□□ -0.3
FARP1-217ENST00000596467 NUTM2EB1AL46 878 aaPredicted RBP13.17□□□□□ -0.3
FARP1-217ENST00000596467 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
FARP1-217ENST00000596467 QTRT2Q9H974 415 aaKnown RBP13.17□□□□□ -0.3
FARP1-217ENST00000596467 RRP7BPQ9NSQ0 103 aa13.17□□□□□ -0.3
FARP1-217ENST00000596467 ZRANB1Q9UGI0 708 aa13.17□□□□□ -0.3
FARP1-217ENST00000596467 PTPN23Q9H3S7 1636 aa13.17□□□□□ -0.3
FARP1-217ENST00000596467 NGLY1Q96IV0 654 aa13.16□□□□□ -0.3
FARP1-217ENST00000596467 TRPM2O94759 1503 aa13.16□□□□□ -0.3
FARP1-217ENST00000596467 LAMC1P11047 1609 aa13.15□□□□□ -0.3
FARP1-217ENST00000596467 PPP1R15AO75807 674 aaPredicted RBP13.15□□□□□ -0.3
FARP1-217ENST00000596467 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
FARP1-217ENST00000596467 LRRC59Q96AG4 307 aaKnown RBP13.15□□□□□ -0.3
FARP1-217ENST00000596467 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
FARP1-217ENST00000596467 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
FARP1-217ENST00000596467 DAPK1P53355 1430 aa13.14□□□□□ -0.31
FARP1-217ENST00000596467 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.14□□□□□ -0.31
FARP1-217ENST00000596467 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
FARP1-217ENST00000596467 MST1RQ04912 1400 aa13.13□□□□□ -0.31
FARP1-217ENST00000596467 UNC13BO14795 1591 aa13.12□□□□□ -0.31
FARP1-217ENST00000596467 PNPLA6Q8IY17 1366 aa13.12□□□□□ -0.31
FARP1-217ENST00000596467 ANKRD30AQ9BXX3 1397 aa13.12□□□□□ -0.31
FARP1-217ENST00000596467 AMER1Q5JTC6 1135 aaPredicted RBP13.12□□□□□ -0.31
FARP1-217ENST00000596467 CCDC125Q86Z20 511 aa13.12□□□□□ -0.31
FARP1-217ENST00000596467 C8orf37Q96NL8 207 aa13.12□□□□□ -0.31
FARP1-217ENST00000596467 MARF1Q9Y4F3 1742 aaKnown RBP13.11□□□□□ -0.31
FARP1-217ENST00000596467 VPS8Q8N3P4 1428 aa13.11□□□□□ -0.31
FARP1-217ENST00000596467 LRP5O75197 1615 aa13.1□□□□□ -0.31
FARP1-217ENST00000596467 KANK4Q5T7N3 995 aaPredicted RBP13.09□□□□□ -0.31
FARP1-217ENST00000596467 NALCNQ8IZF0 1738 aa13.09□□□□□ -0.31
FARP1-217ENST00000596467 PTPRUQ92729 1446 aa13.09□□□□□ -0.31
FARP1-217ENST00000596467 AMOTL2Q9Y2J4 779 aa13.09□□□□□ -0.31
FARP1-217ENST00000596467 NRXN3Q9Y4C0 1643 aa13.09□□□□□ -0.31
FARP1-217ENST00000596467 E9PCH4 1651 aa13.08□□□□□ -0.31
FARP1-217ENST00000596467 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms