RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ZFYVE9O95405 1425 aa28.27■■■□□ 2.12
PNKP-207ENST00000596014 RIMS2Q9UQ26 1411 aa28.26■■■□□ 2.12
PNKP-207ENST00000596014 HDGFP51858 240 aaKnown RBP28.26■■■□□ 2.11
PNKP-207ENST00000596014 MED14O60244 1454 aa28.25■■■□□ 2.11
PNKP-207ENST00000596014 SPATA31E1Q6ZUB1 1445 aa28.24■■■□□ 2.11
PNKP-207ENST00000596014 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.23■■■□□ 2.11
PNKP-207ENST00000596014 NPHP4O75161 1426 aaPredicted RBP28.22■■■□□ 2.11
PNKP-207ENST00000596014 RGL3Q3MIN7 710 aa28.21■■■□□ 2.11
PNKP-207ENST00000596014 NUTM2DQ5VT03 806 aaPredicted RBP28.21■■■□□ 2.11
PNKP-207ENST00000596014 PPP1R15AO75807 674 aaPredicted RBP28.19■■■□□ 2.1
PNKP-207ENST00000596014 IQGAP1P46940 1657 aa28.19■■■□□ 2.1
PNKP-207ENST00000596014 NEXMIFQ5QGS0 1516 aa28.19■■■□□ 2.1
PNKP-207ENST00000596014 RPGRIP1LQ68CZ1 1315 aa28.18■■■□□ 2.1
PNKP-207ENST00000596014 PPLO60437 1756 aa28.14■■■□□ 2.09
PNKP-207ENST00000596014 PLEKHG1Q9ULL1 1385 aa28.13■■■□□ 2.09
PNKP-207ENST00000596014 SENP3Q9H4L4 574 aaPredicted RBP28.12■■■□□ 2.09
PNKP-207ENST00000596014 VGFO15240 615 aaPredicted RBP28.11■■■□□ 2.09
PNKP-207ENST00000596014 BCANQ96GW7 911 aa28.11■■■□□ 2.09
PNKP-207ENST00000596014 SIN3AQ96ST3 1273 aa28.11■■■□□ 2.09
PNKP-207ENST00000596014 IFT172Q9UG01 1749 aa28.1■■■□□ 2.09
PNKP-207ENST00000596014 SLC26A8Q96RN1 970 aa28.08■■■□□ 2.09
PNKP-207ENST00000596014 NEUROD1Q13562 356 aa28.05■■■□□ 2.08
PNKP-207ENST00000596014 ADAMTS13Q76LX8 1427 aa28.03■■■□□ 2.08
PNKP-207ENST00000596014 ADGRF5Q8IZF2 1346 aa28.02■■■□□ 2.08
PNKP-207ENST00000596014 SETBP1Q9Y6X0 1596 aa28.02■■■□□ 2.08
PNKP-207ENST00000596014 ZNF335Q9H4Z2 1342 aaPredicted RBP28.02■■■□□ 2.08
PNKP-207ENST00000596014 NRXN3Q9Y4C0 1643 aa28.02■■■□□ 2.08
PNKP-207ENST00000596014 TBX22Q9Y458 520 aa28.01■■■□□ 2.07
PNKP-207ENST00000596014 DCAF11Q8TEB1 546 aa28■■■□□ 2.07
PNKP-207ENST00000596014 MYOM2P54296 1465 aa27.97■■■□□ 2.07
PNKP-207ENST00000596014 DIP2AQ14689 1571 aa27.97■■■□□ 2.07
PNKP-207ENST00000596014 KDM2AQ9Y2K7 1162 aa27.97■■■□□ 2.07
PNKP-207ENST00000596014 STAC3Q96MF2 364 aa27.96■■■□□ 2.07
PNKP-207ENST00000596014 CCER1Q8TC90 406 aaPredicted RBP27.94■■■□□ 2.06
PNKP-207ENST00000596014 LTBP4Q8N2S1 1624 aa27.94■■■□□ 2.06
PNKP-207ENST00000596014 NRXN1Q9ULB1 1477 aa27.94■■■□□ 2.06
PNKP-207ENST00000596014 CLSPNQ9HAW4 1339 aa27.94■■■□□ 2.06
PNKP-207ENST00000596014 STRCP1A6NGW2 1772 aa27.93■■■□□ 2.06
PNKP-207ENST00000596014 L3MBTL2Q969R5 705 aa27.93■■■□□ 2.06
PNKP-207ENST00000596014 PIK3C2GO75747 1445 aa27.92■■■□□ 2.06
PNKP-207ENST00000596014 ALKQ9UM73 1620 aa27.92■■■□□ 2.06
PNKP-207ENST00000596014 CHD2O14647 1828 aaKnown RBP27.91■■■□□ 2.06
PNKP-207ENST00000596014 KCNA6P17658 529 aa27.91■■■□□ 2.06
PNKP-207ENST00000596014 PIK3R4Q99570 1358 aa27.9■■■□□ 2.06
PNKP-207ENST00000596014 SETD1AO15047 1707 aaKnown RBP27.9■■■□□ 2.06
PNKP-207ENST00000596014 METP08581 1390 aa27.89■■■□□ 2.05
PNKP-207ENST00000596014 C14orf93Q9H972 538 aaKnown RBP27.86■■■□□ 2.05
PNKP-207ENST00000596014 CPS1P31327 1500 aa27.86■■■□□ 2.05
PNKP-207ENST00000596014 NWD1Q149M9 1564 aa27.85■■■□□ 2.05
PNKP-207ENST00000596014 TONSLQ96HA7 1378 aa27.85■■■□□ 2.05
PNKP-207ENST00000596014 PTPRUQ92729 1446 aa27.84■■■□□ 2.05
PNKP-207ENST00000596014 CFAP70Q5T0N1 1121 aa27.84■■■□□ 2.05
PNKP-207ENST00000596014 AMOTL2Q9Y2J4 779 aa27.83■■■□□ 2.05
PNKP-207ENST00000596014 CERKQ8TCT0 537 aa27.81■■■□□ 2.04
PNKP-207ENST00000596014 LAMC1P11047 1609 aa27.81■■■□□ 2.04
PNKP-207ENST00000596014 PRAG1Q86YV5 1406 aa27.79■■■□□ 2.04
PNKP-207ENST00000596014 TMEM132EQ6IEE7 984 aa27.79■■■□□ 2.04
PNKP-207ENST00000596014 NKTRP30414 1462 aaKnown RBP27.78■■■□□ 2.04
PNKP-207ENST00000596014 LRRC7Q96NW7 1537 aa27.78■■■□□ 2.04
PNKP-207ENST00000596014 XRN1Q8IZH2 1706 aaKnown RBP27.78■■■□□ 2.04
PNKP-207ENST00000596014 ASXL1Q8IXJ9 1541 aa27.77■■■□□ 2.04
PNKP-207ENST00000596014 PROSER2Q86WR7 435 aaPredicted RBP27.76■■■□□ 2.03
PNKP-207ENST00000596014 KIAA1210Q9ULL0 1709 aa27.73■■■□□ 2.03
PNKP-207ENST00000596014 XIRP1Q702N8 1843 aaKnown RBP27.72■■■□□ 2.03
PNKP-207ENST00000596014 RBM33Q96EV2 1170 aaKnown RBP27.72■■■□□ 2.03
PNKP-207ENST00000596014 TIMELESSQ9UNS1 1208 aa27.72■■■□□ 2.03
PNKP-207ENST00000596014 LRPPRCP42704 1394 aaKnown RBP27.71■■■□□ 2.03
PNKP-207ENST00000596014 TMEM94Q12767 1356 aa27.71■■■□□ 2.03
PNKP-207ENST00000596014 STK26Q9P289 416 aa27.71■■■□□ 2.03
PNKP-207ENST00000596014 YTHDC2Q9H6S0 1430 aaKnown RBP27.71■■■□□ 2.03
PNKP-207ENST00000596014 ADGRB1O14514 1584 aa27.7■■■□□ 2.03
PNKP-207ENST00000596014 IQSEC2Q5JU85 1478 aa27.7■■■□□ 2.03
PNKP-207ENST00000596014 NBPF8Q3BBV2 869 aa27.68■■■□□ 2.02
PNKP-207ENST00000596014 ABCC11Q96J66 1382 aa27.68■■■□□ 2.02
PNKP-207ENST00000596014 NBPF1Q3BBV0 1214 aa27.67■■■□□ 2.02
PNKP-207ENST00000596014 PTCH1Q13635 1447 aa27.67■■■□□ 2.02
PNKP-207ENST00000596014 ROBO2Q9HCK4 1378 aa27.66■■■□□ 2.02
PNKP-207ENST00000596014 TECPR2O15040 1411 aa27.66■■■□□ 2.02
PNKP-207ENST00000596014 KNDC1Q76NI1 1749 aa27.65■■■□□ 2.02
PNKP-207ENST00000596014 TRPM1Q7Z4N2 1603 aa27.65■■■□□ 2.02
PNKP-207ENST00000596014 NCOA3Q9Y6Q9 1424 aa27.63■■■□□ 2.01
PNKP-207ENST00000596014 C14orf37Q86TY3 774 aa27.6■■■□□ 2.01
PNKP-207ENST00000596014 SIRT1Q96EB6 747 aa27.6■■■□□ 2.01
PNKP-207ENST00000596014 TRAK1Q9UPV9 953 aa27.6■■■□□ 2.01
PNKP-207ENST00000596014 WAPLQ7Z5K2 1190 aa27.59■■■□□ 2.01
PNKP-207ENST00000596014 FAM135BQ49AJ0 1406 aa27.57■■■□□ 2
PNKP-207ENST00000596014 DLC1Q96QB1 1528 aa27.57■■■□□ 2
PNKP-207ENST00000596014 ROCK2O75116 1388 aaKnown RBP27.56■■■□□ 2
PNKP-207ENST00000596014 MSH6P52701 1360 aa27.56■■■□□ 2
PNKP-207ENST00000596014 C19orf44Q9H6X5 657 aa27.56■■■□□ 2
PNKP-207ENST00000596014 PLEKHH1Q9ULM0 1364 aa27.55■■■□□ 2
PNKP-207ENST00000596014 UBAP1LF5GYI3 381 aa27.54■■■□□ 2
PNKP-207ENST00000596014 RALGAPBQ86X10 1494 aa27.54■■■□□ 2
PNKP-207ENST00000596014 PRAM1Q96QH2 718 aa27.53■■■□□ 2
PNKP-207ENST00000596014 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.53■■■□□ 2
PNKP-207ENST00000596014 NALCNQ8IZF0 1738 aa27.52■■■□□ 2
PNKP-207ENST00000596014 ADGRL3Q9HAR2 1447 aa27.52■■■□□ 2
PNKP-207ENST00000596014 TOM1O60784 492 aa27.52■■■□□ 2
PNKP-207ENST00000596014 POGKQ9P215 609 aa27.52■■■□□ 2
PNKP-207ENST00000596014 GPRASP1Q5JY77 1395 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms