RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 CCER1Q8TC90 406 aaPredicted RBP21.75■■□□□ 1.07
DDX49-204ENST00000595858 ZFYVE9O95405 1425 aa21.75■■□□□ 1.07
DDX49-204ENST00000595858 NEUROD1Q13562 356 aa21.74■■□□□ 1.07
DDX49-204ENST00000595858 RPGRIP1LQ68CZ1 1315 aa21.74■■□□□ 1.07
DDX49-204ENST00000595858 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.73■■□□□ 1.07
DDX49-204ENST00000595858 NEURL4Q96JN8 1562 aa21.73■■□□□ 1.07
DDX49-204ENST00000595858 NUTM2DQ5VT03 806 aaPredicted RBP21.73■■□□□ 1.07
DDX49-204ENST00000595858 SCAF11Q99590 1463 aaKnown RBP21.71■■□□□ 1.07
DDX49-204ENST00000595858 STRCQ7RTU9 1775 aa21.71■■□□□ 1.07
DDX49-204ENST00000595858 CLSPNQ9HAW4 1339 aa21.71■■□□□ 1.07
DDX49-204ENST00000595858 PPP1R15AO75807 674 aaPredicted RBP21.7■■□□□ 1.06
DDX49-204ENST00000595858 NEXMIFQ5QGS0 1516 aa21.68■■□□□ 1.06
DDX49-204ENST00000595858 VGFO15240 615 aaPredicted RBP21.68■■□□□ 1.06
DDX49-204ENST00000595858 MED14O60244 1454 aa21.67■■□□□ 1.06
DDX49-204ENST00000595858 DMRT2Q9Y5R5 561 aa21.67■■□□□ 1.06
DDX49-204ENST00000595858 NPHP4O75161 1426 aaPredicted RBP21.66■■□□□ 1.06
DDX49-204ENST00000595858 POLR1AO95602 1720 aaPredicted RBP21.66■■□□□ 1.06
DDX49-204ENST00000595858 DCAF11Q8TEB1 546 aa21.64■■□□□ 1.06
DDX49-204ENST00000595858 PLEKHG1Q9ULL1 1385 aa21.64■■□□□ 1.05
DDX49-204ENST00000595858 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.05
DDX49-204ENST00000595858 PPLO60437 1756 aa21.63■■□□□ 1.05
DDX49-204ENST00000595858 BCANQ96GW7 911 aa21.62■■□□□ 1.05
DDX49-204ENST00000595858 KDM2AQ9Y2K7 1162 aa21.62■■□□□ 1.05
DDX49-204ENST00000595858 ADGRF5Q8IZF2 1346 aa21.62■■□□□ 1.05
DDX49-204ENST00000595858 L3MBTL2Q969R5 705 aa21.62■■□□□ 1.05
DDX49-204ENST00000595858 STAC3Q96MF2 364 aa21.61■■□□□ 1.05
DDX49-204ENST00000595858 IFT172Q9UG01 1749 aa21.6■■□□□ 1.05
DDX49-204ENST00000595858 SLC26A8Q96RN1 970 aa21.59■■□□□ 1.05
DDX49-204ENST00000595858 IQGAP1P46940 1657 aa21.58■■□□□ 1.05
DDX49-204ENST00000595858 MYOM2P54296 1465 aa21.57■■□□□ 1.04
DDX49-204ENST00000595858 TONSLQ96HA7 1378 aa21.57■■□□□ 1.04
DDX49-204ENST00000595858 ADAMTS13Q76LX8 1427 aa21.56■■□□□ 1.04
DDX49-204ENST00000595858 TBX22Q9Y458 520 aa21.56■■□□□ 1.04
DDX49-204ENST00000595858 SETBP1Q9Y6X0 1596 aa21.54■■□□□ 1.04
DDX49-204ENST00000595858 NRXN1Q9ULB1 1477 aa21.54■■□□□ 1.04
DDX49-204ENST00000595858 PIK3C2GO75747 1445 aa21.53■■□□□ 1.04
DDX49-204ENST00000595858 NRXN3Q9Y4C0 1643 aa21.52■■□□□ 1.04
DDX49-204ENST00000595858 TIMELESSQ9UNS1 1208 aa21.52■■□□□ 1.03
DDX49-204ENST00000595858 C14orf93Q9H972 538 aaKnown RBP21.5■■□□□ 1.03
DDX49-204ENST00000595858 CFAP70Q5T0N1 1121 aa21.49■■□□□ 1.03
DDX49-204ENST00000595858 ALKQ9UM73 1620 aa21.49■■□□□ 1.03
DDX49-204ENST00000595858 DIP2AQ14689 1571 aa21.48■■□□□ 1.03
DDX49-204ENST00000595858 ZNF335Q9H4Z2 1342 aaPredicted RBP21.48■■□□□ 1.03
DDX49-204ENST00000595858 PRAG1Q86YV5 1406 aa21.47■■□□□ 1.03
DDX49-204ENST00000595858 METP08581 1390 aa21.47■■□□□ 1.03
DDX49-204ENST00000595858 PIK3R4Q99570 1358 aa21.45■■□□□ 1.02
DDX49-204ENST00000595858 KCNA6P17658 529 aa21.45■■□□□ 1.02
DDX49-204ENST00000595858 NBPF8Q3BBV2 869 aa21.44■■□□□ 1.02
DDX49-204ENST00000595858 TMEM132EQ6IEE7 984 aa21.43■■□□□ 1.02
DDX49-204ENST00000595858 SETD1AO15047 1707 aaKnown RBP21.42■■□□□ 1.02
DDX49-204ENST00000595858 PTPRUQ92729 1446 aa21.42■■□□□ 1.02
DDX49-204ENST00000595858 AMOTL2Q9Y2J4 779 aa21.41■■□□□ 1.02
DDX49-204ENST00000595858 LAMC1P11047 1609 aa21.39■■□□□ 1.02
DDX49-204ENST00000595858 CHD2O14647 1828 aaKnown RBP21.39■■□□□ 1.01
DDX49-204ENST00000595858 NBPF1Q3BBV0 1214 aa21.39■■□□□ 1.01
DDX49-204ENST00000595858 ASXL1Q8IXJ9 1541 aa21.37■■□□□ 1.01
DDX49-204ENST00000595858 STRCP1A6NGW2 1772 aa21.36■■□□□ 1.01
DDX49-204ENST00000595858 LTBP4Q8N2S1 1624 aa21.36■■□□□ 1.01
DDX49-204ENST00000595858 STK26Q9P289 416 aa21.36■■□□□ 1.01
DDX49-204ENST00000595858 ADGRB1O14514 1584 aa21.35■■□□□ 1.01
DDX49-204ENST00000595858 NWD1Q149M9 1564 aa21.35■■□□□ 1.01
DDX49-204ENST00000595858 KIAA1210Q9ULL0 1709 aa21.35■■□□□ 1.01
DDX49-204ENST00000595858 LRPPRCP42704 1394 aaKnown RBP21.35■■□□□ 1.01
DDX49-204ENST00000595858 YTHDC2Q9H6S0 1430 aaKnown RBP21.34■■□□□ 1.01
DDX49-204ENST00000595858 ABCC11Q96J66 1382 aa21.34■■□□□ 1.01
DDX49-204ENST00000595858 PROSER2Q86WR7 435 aaPredicted RBP21.33■■□□□ 1.01
DDX49-204ENST00000595858 CPS1P31327 1500 aa21.33■■□□□ 1
DDX49-204ENST00000595858 TRPM1Q7Z4N2 1603 aa21.32■■□□□ 1
DDX49-204ENST00000595858 NKTRP30414 1462 aaKnown RBP21.32■■□□□ 1
DDX49-204ENST00000595858 XRN1Q8IZH2 1706 aaKnown RBP21.32■■□□□ 1
DDX49-204ENST00000595858 ROCK2O75116 1388 aaKnown RBP21.31■■□□□ 1
DDX49-204ENST00000595858 TRAK1Q9UPV9 953 aa21.3■■□□□ 1
DDX49-204ENST00000595858 ROBO2Q9HCK4 1378 aa21.3■■□□□ 1
DDX49-204ENST00000595858 RBM33Q96EV2 1170 aaKnown RBP21.3■■□□□ 1
DDX49-204ENST00000595858 TECPR2O15040 1411 aa21.29■■□□□ 1
DDX49-204ENST00000595858 LRRC7Q96NW7 1537 aa21.29■■□□□ 1
DDX49-204ENST00000595858 RALGAPBQ86X10 1494 aa21.29■■□□□ 1
DDX49-204ENST00000595858 SIRT1Q96EB6 747 aa21.28■■□□□ 1
DDX49-204ENST00000595858 PTCH1Q13635 1447 aa21.28■■□□□ 1
DDX49-204ENST00000595858 TMEM94Q12767 1356 aa21.27■■□□□ 1
DDX49-204ENST00000595858 GPRASP1Q5JY77 1395 aa21.27■■□□□ 1
DDX49-204ENST00000595858 CERKQ8TCT0 537 aa21.26■□□□□ 0.99
DDX49-204ENST00000595858 CARD11Q9BXL7 1154 aa21.26■□□□□ 0.99
DDX49-204ENST00000595858 WAPLQ7Z5K2 1190 aa21.26■□□□□ 0.99
DDX49-204ENST00000595858 FAM135BQ49AJ0 1406 aa21.24■□□□□ 0.99
DDX49-204ENST00000595858 PRAM1Q96QH2 718 aa21.24■□□□□ 0.99
DDX49-204ENST00000595858 KNDC1Q76NI1 1749 aa21.24■□□□□ 0.99
DDX49-204ENST00000595858 DLC1Q96QB1 1528 aa21.23■□□□□ 0.99
DDX49-204ENST00000595858 NCOA3Q9Y6Q9 1424 aa21.23■□□□□ 0.99
DDX49-204ENST00000595858 PLEKHH1Q9ULM0 1364 aa21.22■□□□□ 0.99
DDX49-204ENST00000595858 POGKQ9P215 609 aa21.22■□□□□ 0.99
DDX49-204ENST00000595858 C14orf37Q86TY3 774 aa21.21■□□□□ 0.99
DDX49-204ENST00000595858 SAFB2Q14151 953 aaKnown RBP eCLIP21.2■□□□□ 0.98
DDX49-204ENST00000595858 C19orf44Q9H6X5 657 aa21.19■□□□□ 0.98
DDX49-204ENST00000595858 XIRP1Q702N8 1843 aaKnown RBP21.19■□□□□ 0.98
DDX49-204ENST00000595858 IQSEC2Q5JU85 1478 aa21.17■□□□□ 0.98
DDX49-204ENST00000595858 ARHGEF28Q8N1W1 1705 aaKnown RBP21.16■□□□□ 0.98
DDX49-204ENST00000595858 MSH6P52701 1360 aa21.16■□□□□ 0.98
DDX49-204ENST00000595858 ADGRL3Q9HAR2 1447 aa21.15■□□□□ 0.98
DDX49-204ENST00000595858 CENPJQ9HC77 1338 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms