RNA–Protein interactions for RNA: ENST00000595452.1

TMEM38A-202, Transcript of transmembrane protein 38A, humanhuman

TSL 2

Gene TMEM38A, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-202ENST00000595452 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.32■□□□□ 0.84
TMEM38A-202ENST00000595452 RIMS2Q9UQ26 1411 aa20.3■□□□□ 0.84
TMEM38A-202ENST00000595452 LTKP29376 864 aa20.3■□□□□ 0.84
TMEM38A-202ENST00000595452 BCANQ96GW7 911 aa20.3■□□□□ 0.84
TMEM38A-202ENST00000595452 CLTCL1P53675 1640 aa20.28■□□□□ 0.84
TMEM38A-202ENST00000595452 ZFYVE9O95405 1425 aa20.27■□□□□ 0.84
TMEM38A-202ENST00000595452 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
TMEM38A-202ENST00000595452 ZNF326Q5BKZ1 582 aaKnown RBP20.25■□□□□ 0.83
TMEM38A-202ENST00000595452 RAB3GAP2Q9H2M9 1393 aa20.24■□□□□ 0.83
TMEM38A-202ENST00000595452 DIP2AQ14689 1571 aa20.24■□□□□ 0.83
TMEM38A-202ENST00000595452 MPHOSPH9Q99550 1183 aa20.22■□□□□ 0.83
TMEM38A-202ENST00000595452 CCDC144AA2RUR9 1427 aa20.21■□□□□ 0.83
TMEM38A-202ENST00000595452 STRCP1A6NGW2 1772 aa20.2■□□□□ 0.82
TMEM38A-202ENST00000595452 SLC26A8Q96RN1 970 aa20.18■□□□□ 0.82
TMEM38A-202ENST00000595452 NKTRP30414 1462 aaKnown RBP20.17■□□□□ 0.82
TMEM38A-202ENST00000595452 NWD1Q149M9 1564 aa20.17■□□□□ 0.82
TMEM38A-202ENST00000595452 HRCP23327 699 aa20.16■□□□□ 0.82
TMEM38A-202ENST00000595452 NEXMIFQ5QGS0 1516 aa20.16■□□□□ 0.82
TMEM38A-202ENST00000595452 LRRC7Q96NW7 1537 aa20.16■□□□□ 0.82
TMEM38A-202ENST00000595452 UBAP1LF5GYI3 381 aa20.15■□□□□ 0.82
TMEM38A-202ENST00000595452 CHD2O14647 1828 aaKnown RBP20.15■□□□□ 0.82
TMEM38A-202ENST00000595452 SETBP1Q9Y6X0 1596 aa20.14■□□□□ 0.81
TMEM38A-202ENST00000595452 TOM1O60784 492 aa20.14■□□□□ 0.81
TMEM38A-202ENST00000595452 KCNA6P17658 529 aa20.14■□□□□ 0.81
TMEM38A-202ENST00000595452 PIK3R4Q99570 1358 aa20.13■□□□□ 0.81
TMEM38A-202ENST00000595452 RPGRIP1LQ68CZ1 1315 aa20.13■□□□□ 0.81
TMEM38A-202ENST00000595452 FOXD1Q16676 465 aa20.13■□□□□ 0.81
TMEM38A-202ENST00000595452 NUTM2DQ5VT03 806 aaPredicted RBP20.13■□□□□ 0.81
TMEM38A-202ENST00000595452 TBX22Q9Y458 520 aa20.13■□□□□ 0.81
TMEM38A-202ENST00000595452 PPLO60437 1756 aa20.12■□□□□ 0.81
TMEM38A-202ENST00000595452 VGFO15240 615 aaPredicted RBP20.11■□□□□ 0.81
TMEM38A-202ENST00000595452 SENP3Q9H4L4 574 aaPredicted RBP20.1■□□□□ 0.81
TMEM38A-202ENST00000595452 ADAMTS13Q76LX8 1427 aa20.09■□□□□ 0.81
TMEM38A-202ENST00000595452 XIRP1Q702N8 1843 aaKnown RBP20.08■□□□□ 0.8
TMEM38A-202ENST00000595452 NRXN3Q9Y4C0 1643 aa20.08■□□□□ 0.8
TMEM38A-202ENST00000595452 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
TMEM38A-202ENST00000595452 PROSER2Q86WR7 435 aaPredicted RBP20.07■□□□□ 0.8
TMEM38A-202ENST00000595452 IFT172Q9UG01 1749 aa20.05■□□□□ 0.8
TMEM38A-202ENST00000595452 TMEM94Q12767 1356 aa20.05■□□□□ 0.8
TMEM38A-202ENST00000595452 ANKRD30BQ9BXX2 1392 aa20.05■□□□□ 0.8
TMEM38A-202ENST00000595452 MSH6P52701 1360 aa20.03■□□□□ 0.8
TMEM38A-202ENST00000595452 SPATA31E1Q6ZUB1 1445 aa20.02■□□□□ 0.8
TMEM38A-202ENST00000595452 PIP4K2BP78356 416 aa20.02■□□□□ 0.8
TMEM38A-202ENST00000595452 NCOA3Q9Y6Q9 1424 aa20.02■□□□□ 0.79
TMEM38A-202ENST00000595452 RGL3Q3MIN7 710 aa20.01■□□□□ 0.79
TMEM38A-202ENST00000595452 XRN1Q8IZH2 1706 aaKnown RBP20.01■□□□□ 0.79
TMEM38A-202ENST00000595452 C14orf37Q86TY3 774 aa20■□□□□ 0.79
TMEM38A-202ENST00000595452 AMOTL2Q9Y2J4 779 aa19.98■□□□□ 0.79
TMEM38A-202ENST00000595452 ALKQ9UM73 1620 aa19.98■□□□□ 0.79
TMEM38A-202ENST00000595452 SETD1AO15047 1707 aaKnown RBP19.97■□□□□ 0.79
TMEM38A-202ENST00000595452 LAMC1P11047 1609 aa19.97■□□□□ 0.79
TMEM38A-202ENST00000595452 METP08581 1390 aa19.95■□□□□ 0.78
TMEM38A-202ENST00000595452 MYOM2P54296 1465 aa19.94■□□□□ 0.78
TMEM38A-202ENST00000595452 PTPRUQ92729 1446 aa19.93■□□□□ 0.78
TMEM38A-202ENST00000595452 TRIM26Q12899 539 aaPredicted RBP19.92■□□□□ 0.78
TMEM38A-202ENST00000595452 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.91■□□□□ 0.78
TMEM38A-202ENST00000595452 RBM33Q96EV2 1170 aaKnown RBP19.91■□□□□ 0.78
TMEM38A-202ENST00000595452 PIK3C2GO75747 1445 aa19.91■□□□□ 0.78
TMEM38A-202ENST00000595452 PTCH1Q13635 1447 aa19.91■□□□□ 0.78
TMEM38A-202ENST00000595452 ATF3P18847 181 aa19.9■□□□□ 0.78
TMEM38A-202ENST00000595452 CADPS2Q86UW7 1296 aa19.9■□□□□ 0.78
TMEM38A-202ENST00000595452 STAC3Q96MF2 364 aa19.9■□□□□ 0.78
TMEM38A-202ENST00000595452 C19orf44Q9H6X5 657 aa19.9■□□□□ 0.78
TMEM38A-202ENST00000595452 ADGRF5Q8IZF2 1346 aa19.9■□□□□ 0.78
TMEM38A-202ENST00000595452 DCCP43146 1447 aa19.9■□□□□ 0.78
TMEM38A-202ENST00000595452 PRAG1Q86YV5 1406 aa19.89■□□□□ 0.77
TMEM38A-202ENST00000595452 ROBO1Q9Y6N7 1651 aa19.88■□□□□ 0.77
TMEM38A-202ENST00000595452 KNDC1Q76NI1 1749 aa19.88■□□□□ 0.77
TMEM38A-202ENST00000595452 FAM135BQ49AJ0 1406 aa19.87■□□□□ 0.77
TMEM38A-202ENST00000595452 NRXN1Q9ULB1 1477 aa19.86■□□□□ 0.77
TMEM38A-202ENST00000595452 ADGRL3Q9HAR2 1447 aa19.85■□□□□ 0.77
TMEM38A-202ENST00000595452 NALCNQ8IZF0 1738 aa19.85■□□□□ 0.77
TMEM38A-202ENST00000595452 HSPA1LP34931 641 aa19.85■□□□□ 0.77
TMEM38A-202ENST00000595452 SLAIN2Q9P270 581 aa19.84■□□□□ 0.77
TMEM38A-202ENST00000595452 DCAF11Q8TEB1 546 aa19.82■□□□□ 0.76
TMEM38A-202ENST00000595452 TECPR2O15040 1411 aa19.81■□□□□ 0.76
TMEM38A-202ENST00000595452 LRPPRCP42704 1394 aaKnown RBP19.81■□□□□ 0.76
TMEM38A-202ENST00000595452 DHX57Q6P158 1386 aaKnown RBP19.81■□□□□ 0.76
TMEM38A-202ENST00000595452 ROBO2Q9HCK4 1378 aa19.8■□□□□ 0.76
TMEM38A-202ENST00000595452 PHLPP1O60346 1717 aa19.79■□□□□ 0.76
TMEM38A-202ENST00000595452 YTHDC2Q9H6S0 1430 aaKnown RBP19.79■□□□□ 0.76
TMEM38A-202ENST00000595452 C14orf93Q9H972 538 aaKnown RBP19.79■□□□□ 0.76
TMEM38A-202ENST00000595452 ASXL1Q8IXJ9 1541 aa19.78■□□□□ 0.76
TMEM38A-202ENST00000595452 STK26Q9P289 416 aa19.78■□□□□ 0.76
TMEM38A-202ENST00000595452 KDM2AQ9Y2K7 1162 aa19.78■□□□□ 0.76
TMEM38A-202ENST00000595452 ABCC11Q96J66 1382 aa19.78■□□□□ 0.76
TMEM38A-202ENST00000595452 CDC42BPGQ6DT37 1551 aa19.76■□□□□ 0.75
TMEM38A-202ENST00000595452 CFAP70Q5T0N1 1121 aa19.75■□□□□ 0.75
TMEM38A-202ENST00000595452 TMEM132EQ6IEE7 984 aa19.75■□□□□ 0.75
TMEM38A-202ENST00000595452 KIAA1210Q9ULL0 1709 aa19.74■□□□□ 0.75
TMEM38A-202ENST00000595452 MST1RQ04912 1400 aa19.74■□□□□ 0.75
TMEM38A-202ENST00000595452 AHDC1Q5TGY3 1603 aaPredicted RBP19.73■□□□□ 0.75
TMEM38A-202ENST00000595452 DISP3Q9P2K9 1392 aa19.72■□□□□ 0.75
TMEM38A-202ENST00000595452 DLC1Q96QB1 1528 aa19.72■□□□□ 0.75
TMEM38A-202ENST00000595452 SIRT1Q96EB6 747 aa19.71■□□□□ 0.75
TMEM38A-202ENST00000595452 ADGRB1O14514 1584 aa19.7■□□□□ 0.74
TMEM38A-202ENST00000595452 MED1Q15648 1581 aaPredicted RBP19.7■□□□□ 0.74
TMEM38A-202ENST00000595452 NHSL1Q5SYE7 1610 aa19.69■□□□□ 0.74
TMEM38A-202ENST00000595452 BRINP3Q76B58 766 aa19.68■□□□□ 0.74
TMEM38A-202ENST00000595452 POGKQ9P215 609 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms