RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 CERKQ8TCT0 537 aa32.56■■■□□ 2.8
HOMER3-206ENST00000594439 KIF1BO60333 1816 aa32.54■■■□□ 2.8
HOMER3-206ENST00000594439 HDGFP51858 240 aaKnown RBP32.49■■■□□ 2.79
HOMER3-206ENST00000594439 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.47■■■□□ 2.79
HOMER3-206ENST00000594439 PLEKHG1Q9ULL1 1385 aa32.45■■■□□ 2.79
HOMER3-206ENST00000594439 PPP1R15AO75807 674 aaPredicted RBP32.44■■■□□ 2.78
HOMER3-206ENST00000594439 STRCP1A6NGW2 1772 aa32.44■■■□□ 2.78
HOMER3-206ENST00000594439 NUTM2DQ5VT03 806 aaPredicted RBP32.43■■■□□ 2.78
HOMER3-206ENST00000594439 CCDC144AA2RUR9 1427 aa32.42■■■□□ 2.78
HOMER3-206ENST00000594439 CPS1P31327 1500 aa32.41■■■□□ 2.78
HOMER3-206ENST00000594439 ZNF326Q5BKZ1 582 aaKnown RBP32.41■■■□□ 2.78
HOMER3-206ENST00000594439 SLC26A8Q96RN1 970 aa32.4■■■□□ 2.78
HOMER3-206ENST00000594439 IQSEC2Q5JU85 1478 aa32.4■■■□□ 2.78
HOMER3-206ENST00000594439 NEXMIFQ5QGS0 1516 aa32.4■■■□□ 2.78
HOMER3-206ENST00000594439 FBXO41Q8TF61 875 aa32.37■■■□□ 2.77
HOMER3-206ENST00000594439 BCANQ96GW7 911 aa32.37■■■□□ 2.77
HOMER3-206ENST00000594439 SENP3Q9H4L4 574 aaPredicted RBP32.36■■■□□ 2.77
HOMER3-206ENST00000594439 ILDR1Q86SU0 546 aaPredicted RBP32.35■■■□□ 2.77
HOMER3-206ENST00000594439 ADAMTS13Q76LX8 1427 aa32.34■■■□□ 2.77
HOMER3-206ENST00000594439 TRIM26Q12899 539 aaPredicted RBP32.32■■■□□ 2.76
HOMER3-206ENST00000594439 SPATA31E1Q6ZUB1 1445 aa32.32■■■□□ 2.76
HOMER3-206ENST00000594439 ANKRD30BQ9BXX2 1392 aa32.31■■■□□ 2.76
HOMER3-206ENST00000594439 NRXN3Q9Y4C0 1643 aa32.3■■■□□ 2.76
HOMER3-206ENST00000594439 PPLO60437 1756 aa32.3■■■□□ 2.76
HOMER3-206ENST00000594439 TBX22Q9Y458 520 aa32.3■■■□□ 2.76
HOMER3-206ENST00000594439 RPGRIP1LQ68CZ1 1315 aa32.29■■■□□ 2.76
HOMER3-206ENST00000594439 DIP2AQ14689 1571 aa32.29■■■□□ 2.76
HOMER3-206ENST00000594439 SETBP1Q9Y6X0 1596 aa32.29■■■□□ 2.76
HOMER3-206ENST00000594439 LRRC7Q96NW7 1537 aa32.28■■■□□ 2.76
HOMER3-206ENST00000594439 NWD1Q149M9 1564 aa32.27■■■□□ 2.76
HOMER3-206ENST00000594439 CHD2O14647 1828 aaKnown RBP32.26■■■□□ 2.76
HOMER3-206ENST00000594439 KCNA6P17658 529 aa32.26■■■□□ 2.75
HOMER3-206ENST00000594439 IFT172Q9UG01 1749 aa32.23■■■□□ 2.75
HOMER3-206ENST00000594439 VGFO15240 615 aaPredicted RBP32.21■■■□□ 2.75
HOMER3-206ENST00000594439 RGL3Q3MIN7 710 aa32.21■■■□□ 2.75
HOMER3-206ENST00000594439 XIRP1Q702N8 1843 aaKnown RBP32.19■■■□□ 2.74
HOMER3-206ENST00000594439 PIK3R4Q99570 1358 aa32.19■■■□□ 2.74
HOMER3-206ENST00000594439 NKTRP30414 1462 aaKnown RBP32.18■■■□□ 2.74
HOMER3-206ENST00000594439 SETD1AO15047 1707 aaKnown RBP32.13■■■□□ 2.73
HOMER3-206ENST00000594439 PTPRUQ92729 1446 aa32.13■■■□□ 2.73
HOMER3-206ENST00000594439 ADGRF5Q8IZF2 1346 aa32.11■■■□□ 2.73
HOMER3-206ENST00000594439 UBAP1LF5GYI3 381 aa32.11■■■□□ 2.73
HOMER3-206ENST00000594439 PROSER2Q86WR7 435 aaPredicted RBP32.11■■■□□ 2.73
HOMER3-206ENST00000594439 METP08581 1390 aa32.1■■■□□ 2.73
HOMER3-206ENST00000594439 TMEM94Q12767 1356 aa32.1■■■□□ 2.73
HOMER3-206ENST00000594439 ALKQ9UM73 1620 aa32.1■■■□□ 2.73
HOMER3-206ENST00000594439 XRN1Q8IZH2 1706 aaKnown RBP32.08■■■□□ 2.73
HOMER3-206ENST00000594439 AMOTL2Q9Y2J4 779 aa32.06■■■□□ 2.72
HOMER3-206ENST00000594439 MYOM2P54296 1465 aa32.04■■■□□ 2.72
HOMER3-206ENST00000594439 RBM33Q96EV2 1170 aaKnown RBP32.04■■■□□ 2.72
HOMER3-206ENST00000594439 TOM1O60784 492 aa32.02■■■□□ 2.72
HOMER3-206ENST00000594439 NRXN1Q9ULB1 1477 aa32.02■■■□□ 2.72
HOMER3-206ENST00000594439 PIK3C2GO75747 1445 aa32.01■■■□□ 2.72
HOMER3-206ENST00000594439 DHX57Q6P158 1386 aaKnown RBP32■■■□□ 2.71
HOMER3-206ENST00000594439 NCOA3Q9Y6Q9 1424 aa31.97■■■□□ 2.71
HOMER3-206ENST00000594439 ASXL1Q8IXJ9 1541 aa31.93■■■□□ 2.7
HOMER3-206ENST00000594439 DCAF11Q8TEB1 546 aa31.92■■■□□ 2.7
HOMER3-206ENST00000594439 MSH6P52701 1360 aa31.92■■■□□ 2.7
HOMER3-206ENST00000594439 PRAG1Q86YV5 1406 aa31.92■■■□□ 2.7
HOMER3-206ENST00000594439 PIP4K2BP78356 416 aa31.91■■■□□ 2.7
HOMER3-206ENST00000594439 C14orf93Q9H972 538 aaKnown RBP31.9■■■□□ 2.7
HOMER3-206ENST00000594439 LAMC1P11047 1609 aa31.89■■■□□ 2.7
HOMER3-206ENST00000594439 PTCH1Q13635 1447 aa31.89■■■□□ 2.7
HOMER3-206ENST00000594439 STAC3Q96MF2 364 aa31.88■■■□□ 2.69
HOMER3-206ENST00000594439 KDM2AQ9Y2K7 1162 aa31.88■■■□□ 2.69
HOMER3-206ENST00000594439 SCAF1Q9H7N4 1312 aaKnown RBP31.87■■■□□ 2.69
HOMER3-206ENST00000594439 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.86■■■□□ 2.69
HOMER3-206ENST00000594439 ROBO2Q9HCK4 1378 aa31.86■■■□□ 2.69
HOMER3-206ENST00000594439 CFAP70Q5T0N1 1121 aa31.86■■■□□ 2.69
HOMER3-206ENST00000594439 C14orf37Q86TY3 774 aa31.85■■■□□ 2.69
HOMER3-206ENST00000594439 SIN3AQ96ST3 1273 aa31.85■■■□□ 2.69
HOMER3-206ENST00000594439 TMEM132EQ6IEE7 984 aa31.84■■■□□ 2.69
HOMER3-206ENST00000594439 LRPPRCP42704 1394 aaKnown RBP31.83■■■□□ 2.69
HOMER3-206ENST00000594439 C19orf44Q9H6X5 657 aa31.83■■■□□ 2.69
HOMER3-206ENST00000594439 KNDC1Q76NI1 1749 aa31.82■■■□□ 2.68
HOMER3-206ENST00000594439 TECPR2O15040 1411 aa31.82■■■□□ 2.68
HOMER3-206ENST00000594439 PCGF6Q9BYE7 350 aa31.81■■■□□ 2.68
HOMER3-206ENST00000594439 YTHDC2Q9H6S0 1430 aaKnown RBP31.8■■■□□ 2.68
HOMER3-206ENST00000594439 NALCNQ8IZF0 1738 aa31.8■■■□□ 2.68
HOMER3-206ENST00000594439 ABCC11Q96J66 1382 aa31.8■■■□□ 2.68
HOMER3-206ENST00000594439 ADGRL3Q9HAR2 1447 aa31.78■■■□□ 2.68
HOMER3-206ENST00000594439 STK26Q9P289 416 aa31.78■■■□□ 2.68
HOMER3-206ENST00000594439 ADGRB1O14514 1584 aa31.77■■■□□ 2.68
HOMER3-206ENST00000594439 DCCP43146 1447 aa31.76■■■□□ 2.68
HOMER3-206ENST00000594439 FAM135BQ49AJ0 1406 aa31.76■■■□□ 2.68
HOMER3-206ENST00000594439 NEUROD1Q13562 356 aa31.75■■■□□ 2.67
HOMER3-206ENST00000594439 CADPS2Q86UW7 1296 aa31.75■■■□□ 2.67
HOMER3-206ENST00000594439 SLAIN2Q9P270 581 aa31.75■■■□□ 2.67
HOMER3-206ENST00000594439 ATF3P18847 181 aa31.73■■■□□ 2.67
HOMER3-206ENST00000594439 HSPA1LP34931 641 aa31.73■■■□□ 2.67
HOMER3-206ENST00000594439 ROBO1Q9Y6N7 1651 aa31.73■■■□□ 2.67
HOMER3-206ENST00000594439 L3MBTL2Q969R5 705 aa31.72■■■□□ 2.67
HOMER3-206ENST00000594439 KIAA1210Q9ULL0 1709 aa31.69■■■□□ 2.66
HOMER3-206ENST00000594439 WAPLQ7Z5K2 1190 aa31.68■■■□□ 2.66
HOMER3-206ENST00000594439 SIRT1Q96EB6 747 aa31.68■■■□□ 2.66
HOMER3-206ENST00000594439 PLEKHH1Q9ULM0 1364 aa31.67■■■□□ 2.66
HOMER3-206ENST00000594439 MST1RQ04912 1400 aa31.66■■■□□ 2.66
HOMER3-206ENST00000594439 DLC1Q96QB1 1528 aa31.65■■■□□ 2.66
HOMER3-206ENST00000594439 CDC42BPGQ6DT37 1551 aa31.61■■■□□ 2.65
HOMER3-206ENST00000594439 TRAK1Q9UPV9 953 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms