RNA–Protein interactions for RNA: ENST00000593832.1

COLGALT1-202, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

TSL 2

Gene COLGALT1, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-202ENST00000593832 CCDC144AA2RUR9 1427 aa18.46■□□□□ 0.54
COLGALT1-202ENST00000593832 LAMC1P11047 1609 aa18.46■□□□□ 0.54
COLGALT1-202ENST00000593832 SAMD9LQ8IVG5 1584 aa18.45■□□□□ 0.54
COLGALT1-202ENST00000593832 ZNF521Q96K83 1311 aa18.45■□□□□ 0.54
COLGALT1-202ENST00000593832 PREX2Q70Z35 1606 aa18.45■□□□□ 0.54
COLGALT1-202ENST00000593832 ERBINQ96RT1 1412 aa18.45■□□□□ 0.54
COLGALT1-202ENST00000593832 RGL3Q3MIN7 710 aa18.45■□□□□ 0.54
COLGALT1-202ENST00000593832 A2MP01023 1474 aa18.44■□□□□ 0.54
COLGALT1-202ENST00000593832 NAP1L5Q96NT1 182 aaPredicted RBP18.44■□□□□ 0.54
COLGALT1-202ENST00000593832 PLA2R1Q13018 1463 aa18.43■□□□□ 0.54
COLGALT1-202ENST00000593832 SYCP2Q9BX26 1530 aa18.43■□□□□ 0.54
COLGALT1-202ENST00000593832 MYO5CQ9NQX4 1742 aa18.41■□□□□ 0.54
COLGALT1-202ENST00000593832 ARHGEF5Q12774 1597 aa18.41■□□□□ 0.54
COLGALT1-202ENST00000593832 RGS3P49796 1198 aa18.4■□□□□ 0.54
COLGALT1-202ENST00000593832 TMF1P82094 1093 aa18.4■□□□□ 0.54
COLGALT1-202ENST00000593832 GOLGA2Q08379 1002 aa18.39■□□□□ 0.54
COLGALT1-202ENST00000593832 AAMPQ13685 434 aa18.39■□□□□ 0.54
COLGALT1-202ENST00000593832 BCL11BQ9C0K0 894 aaPredicted RBP18.39■□□□□ 0.54
COLGALT1-202ENST00000593832 UHRF1BP1LA0JNW5 1464 aa18.39■□□□□ 0.53
COLGALT1-202ENST00000593832 FGD1P98174 961 aa18.39■□□□□ 0.53
COLGALT1-202ENST00000593832 ARXQ96QS3 562 aa18.39■□□□□ 0.53
COLGALT1-202ENST00000593832 PPP2R1AP30153 589 aa18.38■□□□□ 0.53
COLGALT1-202ENST00000593832 CCDC141Q6ZP82 1450 aa18.38■□□□□ 0.53
COLGALT1-202ENST00000593832 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.38■□□□□ 0.53
COLGALT1-202ENST00000593832 MAGI2Q86UL8 1455 aa18.38■□□□□ 0.53
COLGALT1-202ENST00000593832 SLFN5Q08AF3 891 aa18.37■□□□□ 0.53
COLGALT1-202ENST00000593832 WDR7Q9Y4E6 1490 aa18.36■□□□□ 0.53
COLGALT1-202ENST00000593832 TRMT2AQ8IZ69 625 aaKnown RBP18.36■□□□□ 0.53
COLGALT1-202ENST00000593832 USP19O94966 1318 aa18.36■□□□□ 0.53
COLGALT1-202ENST00000593832 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
COLGALT1-202ENST00000593832 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.35■□□□□ 0.53
COLGALT1-202ENST00000593832 EFCAB2Q5VUJ9 269 aa18.34■□□□□ 0.53
COLGALT1-202ENST00000593832 FAM43AQ8N2R8 423 aa18.34■□□□□ 0.53
COLGALT1-202ENST00000593832 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
COLGALT1-202ENST00000593832 EIF3AQ14152 1382 aaKnown RBP18.34■□□□□ 0.53
COLGALT1-202ENST00000593832 AMER1Q5JTC6 1135 aaPredicted RBP18.34■□□□□ 0.53
COLGALT1-202ENST00000593832 NPM1P06748 294 aaKnown RBP eCLIP18.33■□□□□ 0.52
COLGALT1-202ENST00000593832 SPINK5Q9NQ38 1064 aaPredicted RBP18.32■□□□□ 0.52
COLGALT1-202ENST00000593832 RRAGDQ9NQL2 400 aaPredicted RBP18.32■□□□□ 0.52
COLGALT1-202ENST00000593832 KNSTRNQ9Y448 316 aa18.32■□□□□ 0.52
COLGALT1-202ENST00000593832 PLCH2O75038 1416 aa18.32■□□□□ 0.52
COLGALT1-202ENST00000593832 HSP90AA1P07900 732 aaKnown RBP18.31■□□□□ 0.52
COLGALT1-202ENST00000593832 UNC13BO14795 1591 aa18.31■□□□□ 0.52
COLGALT1-202ENST00000593832 IGHDP01880 384 aa18.3■□□□□ 0.52
COLGALT1-202ENST00000593832 VIRMAQ69YN4 1812 aaKnown RBP18.3■□□□□ 0.52
COLGALT1-202ENST00000593832 RNF17Q9BXT8 1623 aaKnown RBP18.29■□□□□ 0.52
COLGALT1-202ENST00000593832 BCAR3O75815 825 aa18.29■□□□□ 0.52
COLGALT1-202ENST00000593832 AFAP1Q8N556 730 aa18.29■□□□□ 0.52
COLGALT1-202ENST00000593832 RSPH4AQ5TD94 716 aa18.29■□□□□ 0.52
COLGALT1-202ENST00000593832 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
COLGALT1-202ENST00000593832 ASXL2Q76L83 1435 aa18.28■□□□□ 0.52
COLGALT1-202ENST00000593832 POGKQ9P215 609 aa18.28■□□□□ 0.52
COLGALT1-202ENST00000593832 SEC24BO95487 1268 aa18.28■□□□□ 0.52
COLGALT1-202ENST00000593832 PIK3C2GO75747 1445 aa18.28■□□□□ 0.52
COLGALT1-202ENST00000593832 TRAPPC8Q9Y2L5 1435 aa18.26■□□□□ 0.51
COLGALT1-202ENST00000593832 ATP10AO60312 1499 aa18.26■□□□□ 0.51
COLGALT1-202ENST00000593832 CCDC146Q8IYE0 955 aa18.26■□□□□ 0.51
COLGALT1-202ENST00000593832 IQGAP3Q86VI3 1631 aa18.25■□□□□ 0.51
COLGALT1-202ENST00000593832 APAF1O14727 1248 aa18.24■□□□□ 0.51
COLGALT1-202ENST00000593832 NLRP1Q9C000 1473 aa18.24■□□□□ 0.51
COLGALT1-202ENST00000593832 PDIA4P13667 645 aaKnown RBP18.24■□□□□ 0.51
COLGALT1-202ENST00000593832 ASXL1Q8IXJ9 1541 aa18.24■□□□□ 0.51
COLGALT1-202ENST00000593832 SYNMO15061 1565 aa18.23■□□□□ 0.51
COLGALT1-202ENST00000593832 CYB5RLQ6IPT4 315 aa18.22■□□□□ 0.51
COLGALT1-202ENST00000593832 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
COLGALT1-202ENST00000593832 ABCC1P33527 1531 aa18.22■□□□□ 0.51
COLGALT1-202ENST00000593832 SPAG9O60271 1321 aaKnown RBP18.21■□□□□ 0.51
COLGALT1-202ENST00000593832 E9PSI1 815 aa18.21■□□□□ 0.51
COLGALT1-202ENST00000593832 ANTXR1Q9H6X2 564 aa18.21■□□□□ 0.51
COLGALT1-202ENST00000593832 MAST1Q9Y2H9 1570 aa18.21■□□□□ 0.51
COLGALT1-202ENST00000593832 FANCAO15360 1455 aa18.21■□□□□ 0.51
COLGALT1-202ENST00000593832 IQGAP1P46940 1657 aa18.21■□□□□ 0.51
COLGALT1-202ENST00000593832 NPC1L1Q9UHC9 1359 aa18.21■□□□□ 0.51
COLGALT1-202ENST00000593832 CGNL1Q0VF96 1302 aa18.21■□□□□ 0.51
COLGALT1-202ENST00000593832 PDE3AQ14432 1141 aa18.21■□□□□ 0.51
COLGALT1-202ENST00000593832 MAPK8IP3Q9UPT6 1336 aa18.2■□□□□ 0.5
COLGALT1-202ENST00000593832 BECN1Q14457 450 aa18.19■□□□□ 0.5
COLGALT1-202ENST00000593832 CLUAP1Q96AJ1 413 aa18.19■□□□□ 0.5
COLGALT1-202ENST00000593832 SLKQ9H2G2 1235 aaPredicted RBP18.19■□□□□ 0.5
COLGALT1-202ENST00000593832 RRP9O43818 475 aaKnown RBP18.19■□□□□ 0.5
COLGALT1-202ENST00000593832 MADDQ8WXG6 1647 aa18.17■□□□□ 0.5
COLGALT1-202ENST00000593832 CDCA8Q53HL2 280 aa18.17■□□□□ 0.5
COLGALT1-202ENST00000593832 MYOM1P52179 1685 aa18.17■□□□□ 0.5
COLGALT1-202ENST00000593832 PANK1Q8TE04 598 aa18.16■□□□□ 0.5
COLGALT1-202ENST00000593832 COG6Q9Y2V7 657 aa18.16■□□□□ 0.5
COLGALT1-202ENST00000593832 PNNQ9H307 717 aaKnown RBP18.16■□□□□ 0.5
COLGALT1-202ENST00000593832 SCAPERQ9BY12 1400 aa18.15■□□□□ 0.5
COLGALT1-202ENST00000593832 ABCA9Q8IUA7 1624 aa18.15■□□□□ 0.5
COLGALT1-202ENST00000593832 ADGRL1O94910 1474 aa18.15■□□□□ 0.5
COLGALT1-202ENST00000593832 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
COLGALT1-202ENST00000593832 PLXNC1O60486 1568 aa18.15■□□□□ 0.5
COLGALT1-202ENST00000593832 SCAF11Q99590 1463 aaKnown RBP18.14■□□□□ 0.49
COLGALT1-202ENST00000593832 L1TD1Q5T7N2 865 aaKnown RBP18.14■□□□□ 0.49
COLGALT1-202ENST00000593832 CENPJQ9HC77 1338 aaPredicted RBP18.14■□□□□ 0.49
COLGALT1-202ENST00000593832 NGEFQ8N5V2 710 aa18.13■□□□□ 0.49
COLGALT1-202ENST00000593832 TBC1D32Q96NH3 1257 aa18.12■□□□□ 0.49
COLGALT1-202ENST00000593832 DUOX2Q9NRD8 1548 aa18.12■□□□□ 0.49
COLGALT1-202ENST00000593832 TBC1D2Q9BYX2 928 aa18.12■□□□□ 0.49
COLGALT1-202ENST00000593832 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
COLGALT1-202ENST00000593832 ARID3AQ99856 593 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms