RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 ZFYVE9O95405 1425 aa29.92■■■□□ 2.38
COPE-204ENST00000593827 PLEKHG1Q9ULL1 1385 aa29.91■■■□□ 2.38
COPE-204ENST00000593827 TOM1O60784 492 aa29.89■■■□□ 2.38
COPE-204ENST00000593827 DISP3Q9P2K9 1392 aa29.89■■■□□ 2.37
COPE-204ENST00000593827 SLC26A8Q96RN1 970 aa29.87■■■□□ 2.37
COPE-204ENST00000593827 SPHKAPQ2M3C7 1700 aa29.87■■■□□ 2.37
COPE-204ENST00000593827 ILDR2Q71H61 639 aa29.86■■■□□ 2.37
COPE-204ENST00000593827 SETD5Q9C0A6 1442 aa29.86■■■□□ 2.37
COPE-204ENST00000593827 TRPM2O94759 1503 aa29.86■■■□□ 2.37
COPE-204ENST00000593827 ZNF326Q5BKZ1 582 aaKnown RBP29.85■■■□□ 2.37
COPE-204ENST00000593827 KCNA6P17658 529 aa29.84■■■□□ 2.37
COPE-204ENST00000593827 SOCS7O14512 581 aa29.81■■■□□ 2.36
COPE-204ENST00000593827 TBX22Q9Y458 520 aa29.81■■■□□ 2.36
COPE-204ENST00000593827 LRRC7Q96NW7 1537 aa29.81■■■□□ 2.36
COPE-204ENST00000593827 MPHOSPH9Q99550 1183 aa29.78■■■□□ 2.36
COPE-204ENST00000593827 MYO5BQ9ULV0 1848 aa29.76■■■□□ 2.35
COPE-204ENST00000593827 NUTM2DQ5VT03 806 aaPredicted RBP29.76■■■□□ 2.35
COPE-204ENST00000593827 SCAF1Q9H7N4 1312 aaKnown RBP29.73■■■□□ 2.35
COPE-204ENST00000593827 PROSER2Q86WR7 435 aaPredicted RBP29.73■■■□□ 2.35
COPE-204ENST00000593827 PIK3R4Q99570 1358 aa29.73■■■□□ 2.35
COPE-204ENST00000593827 NKTRP30414 1462 aaKnown RBP29.73■■■□□ 2.35
COPE-204ENST00000593827 CLTCL1P53675 1640 aa29.72■■■□□ 2.35
COPE-204ENST00000593827 DIP2AQ14689 1571 aa29.72■■■□□ 2.35
COPE-204ENST00000593827 RPGRIP1LQ68CZ1 1315 aa29.71■■■□□ 2.35
COPE-204ENST00000593827 SENP3Q9H4L4 574 aaPredicted RBP29.71■■■□□ 2.35
COPE-204ENST00000593827 STRCP1A6NGW2 1772 aa29.7■■■□□ 2.35
COPE-204ENST00000593827 RAB3GAP2Q9H2M9 1393 aa29.7■■■□□ 2.35
COPE-204ENST00000593827 PIP4K2BP78356 416 aa29.7■■■□□ 2.35
COPE-204ENST00000593827 CCDC144AA2RUR9 1427 aa29.7■■■□□ 2.34
COPE-204ENST00000593827 VGFO15240 615 aaPredicted RBP29.69■■■□□ 2.34
COPE-204ENST00000593827 HRCP23327 699 aa29.68■■■□□ 2.34
COPE-204ENST00000593827 TMEM94Q12767 1356 aa29.67■■■□□ 2.34
COPE-204ENST00000593827 FOXD1Q16676 465 aa29.67■■■□□ 2.34
COPE-204ENST00000593827 ADAMTS13Q76LX8 1427 aa29.67■■■□□ 2.34
COPE-204ENST00000593827 NWD1Q149M9 1564 aa29.66■■■□□ 2.34
COPE-204ENST00000593827 KIF1BO60333 1816 aa29.65■■■□□ 2.34
COPE-204ENST00000593827 NEXMIFQ5QGS0 1516 aa29.61■■■□□ 2.33
COPE-204ENST00000593827 SETBP1Q9Y6X0 1596 aa29.6■■■□□ 2.33
COPE-204ENST00000593827 NCOA3Q9Y6Q9 1424 aa29.6■■■□□ 2.33
COPE-204ENST00000593827 MSH6P52701 1360 aa29.59■■■□□ 2.33
COPE-204ENST00000593827 AMOTL2Q9Y2J4 779 aa29.57■■■□□ 2.32
COPE-204ENST00000593827 C14orf37Q86TY3 774 aa29.55■■■□□ 2.32
COPE-204ENST00000593827 CHD2O14647 1828 aaKnown RBP29.55■■■□□ 2.32
COPE-204ENST00000593827 ANKRD30BQ9BXX2 1392 aa29.52■■■□□ 2.32
COPE-204ENST00000593827 HSPA1LP34931 641 aa29.51■■■□□ 2.31
COPE-204ENST00000593827 RGL3Q3MIN7 710 aa29.51■■■□□ 2.31
COPE-204ENST00000593827 RBM33Q96EV2 1170 aaKnown RBP29.51■■■□□ 2.31
COPE-204ENST00000593827 ALKQ9UM73 1620 aa29.49■■■□□ 2.31
COPE-204ENST00000593827 SPATA31E1Q6ZUB1 1445 aa29.48■■■□□ 2.31
COPE-204ENST00000593827 NRXN3Q9Y4C0 1643 aa29.47■■■□□ 2.31
COPE-204ENST00000593827 C19orf44Q9H6X5 657 aa29.47■■■□□ 2.31
COPE-204ENST00000593827 METP08581 1390 aa29.47■■■□□ 2.31
COPE-204ENST00000593827 FAM135BQ49AJ0 1406 aa29.46■■■□□ 2.31
COPE-204ENST00000593827 PTPRUQ92729 1446 aa29.45■■■□□ 2.31
COPE-204ENST00000593827 XIRP1Q702N8 1843 aaKnown RBP29.45■■■□□ 2.31
COPE-204ENST00000593827 CADPS2Q86UW7 1296 aa29.45■■■□□ 2.31
COPE-204ENST00000593827 ATF3P18847 181 aa29.44■■■□□ 2.3
COPE-204ENST00000593827 SLAIN2Q9P270 581 aa29.43■■■□□ 2.3
COPE-204ENST00000593827 PPLO60437 1756 aa29.39■■■□□ 2.3
COPE-204ENST00000593827 XRN1Q8IZH2 1706 aaKnown RBP29.37■■■□□ 2.29
COPE-204ENST00000593827 ADGRF5Q8IZF2 1346 aa29.37■■■□□ 2.29
COPE-204ENST00000593827 DCCP43146 1447 aa29.37■■■□□ 2.29
COPE-204ENST00000593827 PTCH1Q13635 1447 aa29.34■■■□□ 2.29
COPE-204ENST00000593827 STAC3Q96MF2 364 aa29.33■■■□□ 2.29
COPE-204ENST00000593827 PRAG1Q86YV5 1406 aa29.31■■■□□ 2.28
COPE-204ENST00000593827 PIK3C2GO75747 1445 aa29.29■■■□□ 2.28
COPE-204ENST00000593827 ADGRL3Q9HAR2 1447 aa29.28■■■□□ 2.28
COPE-204ENST00000593827 MYOM2P54296 1465 aa29.28■■■□□ 2.28
COPE-204ENST00000593827 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.25■■■□□ 2.27
COPE-204ENST00000593827 ROBO1Q9Y6N7 1651 aa29.25■■■□□ 2.27
COPE-204ENST00000593827 IFT172Q9UG01 1749 aa29.25■■■□□ 2.27
COPE-204ENST00000593827 SETD1AO15047 1707 aaKnown RBP29.24■■■□□ 2.27
COPE-204ENST00000593827 ROBO2Q9HCK4 1378 aa29.24■■■□□ 2.27
COPE-204ENST00000593827 C14orf93Q9H972 538 aaKnown RBP29.23■■■□□ 2.27
COPE-204ENST00000593827 LRPPRCP42704 1394 aaKnown RBP29.23■■■□□ 2.27
COPE-204ENST00000593827 NRXN1Q9ULB1 1477 aa29.22■■■□□ 2.27
COPE-204ENST00000593827 ABCC11Q96J66 1382 aa29.21■■■□□ 2.27
COPE-204ENST00000593827 STK26Q9P289 416 aa29.2■■■□□ 2.26
COPE-204ENST00000593827 DCAF11Q8TEB1 546 aa29.19■■■□□ 2.26
COPE-204ENST00000593827 TECPR2O15040 1411 aa29.19■■■□□ 2.26
COPE-204ENST00000593827 DHX57Q6P158 1386 aaKnown RBP29.18■■■□□ 2.26
COPE-204ENST00000593827 TMEM132EQ6IEE7 984 aa29.17■■■□□ 2.26
COPE-204ENST00000593827 MST1RQ04912 1400 aa29.15■■■□□ 2.26
COPE-204ENST00000593827 YTHDC2Q9H6S0 1430 aaKnown RBP29.15■■■□□ 2.26
COPE-204ENST00000593827 CFAP70Q5T0N1 1121 aa29.15■■■□□ 2.26
COPE-204ENST00000593827 BRINP3Q76B58 766 aa29.15■■■□□ 2.26
COPE-204ENST00000593827 SIRT1Q96EB6 747 aa29.15■■■□□ 2.26
COPE-204ENST00000593827 KDM2AQ9Y2K7 1162 aa29.15■■■□□ 2.26
COPE-204ENST00000593827 LAMC1P11047 1609 aa29.15■■■□□ 2.26
COPE-204ENST00000593827 PHF23Q9BUL5 403 aaPredicted RBP29.13■■■□□ 2.25
COPE-204ENST00000593827 MED1Q15648 1581 aaPredicted RBP29.13■■■□□ 2.25
COPE-204ENST00000593827 TRIM26Q12899 539 aaPredicted RBP29.12■■■□□ 2.25
COPE-204ENST00000593827 JCADQ9P266 1359 aa29.12■■■□□ 2.25
COPE-204ENST00000593827 NALCNQ8IZF0 1738 aa29.09■■■□□ 2.25
COPE-204ENST00000593827 PHLPP1O60346 1717 aa29.08■■■□□ 2.25
COPE-204ENST00000593827 AHDC1Q5TGY3 1603 aaPredicted RBP29.08■■■□□ 2.25
COPE-204ENST00000593827 WAPLQ7Z5K2 1190 aa29.07■■■□□ 2.24
COPE-204ENST00000593827 ASXL1Q8IXJ9 1541 aa29.07■■■□□ 2.24
COPE-204ENST00000593827 C1orf167Q5SNV9 1468 aa29.06■■■□□ 2.24
COPE-204ENST00000593827 KNDC1Q76NI1 1749 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms