RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 IQGAP1P46940 1657 aa14.19□□□□□ -0.14
DDX39A-220ENST00000593008 ANKRD30BQ9BXX2 1392 aa14.19□□□□□ -0.14
DDX39A-220ENST00000593008 NUTM2DQ5VT03 806 aaPredicted RBP14.18□□□□□ -0.14
DDX39A-220ENST00000593008 BCANQ96GW7 911 aa14.17□□□□□ -0.14
DDX39A-220ENST00000593008 SIN3AQ96ST3 1273 aa14.17□□□□□ -0.14
DDX39A-220ENST00000593008 CCER1Q8TC90 406 aaPredicted RBP14.16□□□□□ -0.14
DDX39A-220ENST00000593008 SLC26A8Q96RN1 970 aa14.16□□□□□ -0.14
DDX39A-220ENST00000593008 ACIN1Q9UKV3 1341 aaKnown RBP14.15□□□□□ -0.14
DDX39A-220ENST00000593008 PPP1R15AO75807 674 aaPredicted RBP14.15□□□□□ -0.14
DDX39A-220ENST00000593008 RIMS2Q9UQ26 1411 aa14.15□□□□□ -0.14
DDX39A-220ENST00000593008 KDM5AP29375 1690 aaKnown RBP14.14□□□□□ -0.15
DDX39A-220ENST00000593008 TMEM131LA2VDJ0 1609 aa14.14□□□□□ -0.15
DDX39A-220ENST00000593008 ZFYVE9O95405 1425 aa14.13□□□□□ -0.15
DDX39A-220ENST00000593008 UBAP1LF5GYI3 381 aa14.12□□□□□ -0.15
DDX39A-220ENST00000593008 CPS1P31327 1500 aa14.11□□□□□ -0.15
DDX39A-220ENST00000593008 MYO5BQ9ULV0 1848 aa14.11□□□□□ -0.15
DDX39A-220ENST00000593008 CCDC144AA2RUR9 1427 aa14.11□□□□□ -0.15
DDX39A-220ENST00000593008 HDGFP51858 240 aaKnown RBP14.11□□□□□ -0.15
DDX39A-220ENST00000593008 ZNF326Q5BKZ1 582 aaKnown RBP14.11□□□□□ -0.15
DDX39A-220ENST00000593008 NEUROD1Q13562 356 aa14.1□□□□□ -0.15
DDX39A-220ENST00000593008 IQSEC2Q5JU85 1478 aa14.1□□□□□ -0.15
DDX39A-220ENST00000593008 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.09□□□□□ -0.15
DDX39A-220ENST00000593008 PLEKHG1Q9ULL1 1385 aa14.09□□□□□ -0.15
DDX39A-220ENST00000593008 SPATA31E1Q6ZUB1 1445 aa14.08□□□□□ -0.15
DDX39A-220ENST00000593008 STRCP1A6NGW2 1772 aa14.08□□□□□ -0.16
DDX39A-220ENST00000593008 RBM33Q96EV2 1170 aaKnown RBP14.07□□□□□ -0.16
DDX39A-220ENST00000593008 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
DDX39A-220ENST00000593008 LRRC7Q96NW7 1537 aa14.06□□□□□ -0.16
DDX39A-220ENST00000593008 PIP4K2BP78356 416 aa14.06□□□□□ -0.16
DDX39A-220ENST00000593008 KCNA6P17658 529 aa14.05□□□□□ -0.16
DDX39A-220ENST00000593008 KIF1BO60333 1816 aa14.04□□□□□ -0.16
DDX39A-220ENST00000593008 TOM1O60784 492 aa14.03□□□□□ -0.16
DDX39A-220ENST00000593008 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
DDX39A-220ENST00000593008 PROSER2Q86WR7 435 aaPredicted RBP14.03□□□□□ -0.16
DDX39A-220ENST00000593008 ADAMTS13Q76LX8 1427 aa14.03□□□□□ -0.16
DDX39A-220ENST00000593008 NEXMIFQ5QGS0 1516 aa14.02□□□□□ -0.16
DDX39A-220ENST00000593008 TBX22Q9Y458 520 aa14.02□□□□□ -0.17
DDX39A-220ENST00000593008 TMEM94Q12767 1356 aa14.01□□□□□ -0.17
DDX39A-220ENST00000593008 IFT172Q9UG01 1749 aa14.01□□□□□ -0.17
DDX39A-220ENST00000593008 L3MBTL2Q969R5 705 aa13.99□□□□□ -0.17
DDX39A-220ENST00000593008 PPLO60437 1756 aa13.99□□□□□ -0.17
DDX39A-220ENST00000593008 TONSLQ96HA7 1378 aa13.97□□□□□ -0.17
DDX39A-220ENST00000593008 CLSPNQ9HAW4 1339 aa13.97□□□□□ -0.17
DDX39A-220ENST00000593008 ALKQ9UM73 1620 aa13.97□□□□□ -0.17
DDX39A-220ENST00000593008 METP08581 1390 aa13.96□□□□□ -0.17
DDX39A-220ENST00000593008 NWD1Q149M9 1564 aa13.96□□□□□ -0.17
DDX39A-220ENST00000593008 NKTRP30414 1462 aaKnown RBP13.96□□□□□ -0.17
DDX39A-220ENST00000593008 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.17
DDX39A-220ENST00000593008 HSPA1LP34931 641 aa13.96□□□□□ -0.17
DDX39A-220ENST00000593008 AMOTL2Q9Y2J4 779 aa13.96□□□□□ -0.17
DDX39A-220ENST00000593008 PTPRUQ92729 1446 aa13.96□□□□□ -0.18
DDX39A-220ENST00000593008 DIP2AQ14689 1571 aa13.96□□□□□ -0.18
DDX39A-220ENST00000593008 RPGRIP1LQ68CZ1 1315 aa13.95□□□□□ -0.18
DDX39A-220ENST00000593008 ADGRF5Q8IZF2 1346 aa13.95□□□□□ -0.18
DDX39A-220ENST00000593008 NRXN3Q9Y4C0 1643 aa13.95□□□□□ -0.18
DDX39A-220ENST00000593008 C14orf37Q86TY3 774 aa13.95□□□□□ -0.18
DDX39A-220ENST00000593008 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
DDX39A-220ENST00000593008 SETBP1Q9Y6X0 1596 aa13.95□□□□□ -0.18
DDX39A-220ENST00000593008 DCAF11Q8TEB1 546 aa13.94□□□□□ -0.18
DDX39A-220ENST00000593008 XIRP1Q702N8 1843 aaKnown RBP13.94□□□□□ -0.18
DDX39A-220ENST00000593008 PIK3R4Q99570 1358 aa13.94□□□□□ -0.18
DDX39A-220ENST00000593008 MYOM2P54296 1465 aa13.93□□□□□ -0.18
DDX39A-220ENST00000593008 CHD2O14647 1828 aaKnown RBP13.92□□□□□ -0.18
DDX39A-220ENST00000593008 NBPF8Q3BBV2 869 aa13.92□□□□□ -0.18
DDX39A-220ENST00000593008 MSH6P52701 1360 aa13.92□□□□□ -0.18
DDX39A-220ENST00000593008 NRXN1Q9ULB1 1477 aa13.92□□□□□ -0.18
DDX39A-220ENST00000593008 ASXL1Q8IXJ9 1541 aa13.91□□□□□ -0.18
DDX39A-220ENST00000593008 DISP3Q9P2K9 1392 aa13.91□□□□□ -0.18
DDX39A-220ENST00000593008 PRAG1Q86YV5 1406 aa13.9□□□□□ -0.18
DDX39A-220ENST00000593008 PIK3C2GO75747 1445 aa13.9□□□□□ -0.19
DDX39A-220ENST00000593008 SETD1AO15047 1707 aaKnown RBP13.88□□□□□ -0.19
DDX39A-220ENST00000593008 SLAIN2Q9P270 581 aa13.88□□□□□ -0.19
DDX39A-220ENST00000593008 C19orf44Q9H6X5 657 aa13.87□□□□□ -0.19
DDX39A-220ENST00000593008 XRN1Q8IZH2 1706 aaKnown RBP13.87□□□□□ -0.19
DDX39A-220ENST00000593008 ATF3P18847 181 aa13.86□□□□□ -0.19
DDX39A-220ENST00000593008 STK26Q9P289 416 aa13.86□□□□□ -0.19
DDX39A-220ENST00000593008 TRPM1Q7Z4N2 1603 aa13.86□□□□□ -0.19
DDX39A-220ENST00000593008 NCOA3Q9Y6Q9 1424 aa13.85□□□□□ -0.19
DDX39A-220ENST00000593008 SOCS7O14512 581 aa13.85□□□□□ -0.19
DDX39A-220ENST00000593008 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
DDX39A-220ENST00000593008 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
DDX39A-220ENST00000593008 ROBO2Q9HCK4 1378 aa13.84□□□□□ -0.19
DDX39A-220ENST00000593008 FAM135BQ49AJ0 1406 aa13.84□□□□□ -0.19
DDX39A-220ENST00000593008 NBPF1Q3BBV0 1214 aa13.84□□□□□ -0.19
DDX39A-220ENST00000593008 CADPS2Q86UW7 1296 aa13.84□□□□□ -0.19
DDX39A-220ENST00000593008 ADGRB1O14514 1584 aa13.83□□□□□ -0.19
DDX39A-220ENST00000593008 RALGAPBQ86X10 1494 aa13.83□□□□□ -0.2
DDX39A-220ENST00000593008 ROBO1Q9Y6N7 1651 aa13.82□□□□□ -0.2
DDX39A-220ENST00000593008 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-220ENST00000593008 WAPLQ7Z5K2 1190 aa13.8□□□□□ -0.2
DDX39A-220ENST00000593008 C14orf93Q9H972 538 aaKnown RBP13.8□□□□□ -0.2
DDX39A-220ENST00000593008 PTCH1Q13635 1447 aa13.8□□□□□ -0.2
DDX39A-220ENST00000593008 ADGRL3Q9HAR2 1447 aa13.8□□□□□ -0.2
DDX39A-220ENST00000593008 LAMC1P11047 1609 aa13.79□□□□□ -0.2
DDX39A-220ENST00000593008 ILDR2Q71H61 639 aa13.79□□□□□ -0.2
DDX39A-220ENST00000593008 TIMELESSQ9UNS1 1208 aa13.78□□□□□ -0.2
DDX39A-220ENST00000593008 LRPPRCP42704 1394 aaKnown RBP13.78□□□□□ -0.2
DDX39A-220ENST00000593008 KIAA1210Q9ULL0 1709 aa13.78□□□□□ -0.2
DDX39A-220ENST00000593008 ROCK2O75116 1388 aaKnown RBP13.77□□□□□ -0.21
DDX39A-220ENST00000593008 DCCP43146 1447 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms