RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 NUTM2DQ5VT03 806 aaPredicted RBP17.61■□□□□ 0.41
H3F3B-212ENST00000592643 ACIN1Q9UKV3 1341 aaKnown RBP17.61■□□□□ 0.41
H3F3B-212ENST00000592643 IQGAP1P46940 1657 aa17.61■□□□□ 0.41
H3F3B-212ENST00000592643 TRIM26Q12899 539 aaPredicted RBP17.6■□□□□ 0.41
H3F3B-212ENST00000592643 ANKRD30BQ9BXX2 1392 aa17.59■□□□□ 0.41
H3F3B-212ENST00000592643 EID1Q9Y6B2 187 aa17.59■□□□□ 0.41
H3F3B-212ENST00000592643 SPATA31E1Q6ZUB1 1445 aa17.58■□□□□ 0.41
H3F3B-212ENST00000592643 PLEKHG1Q9ULL1 1385 aa17.57■□□□□ 0.4
H3F3B-212ENST00000592643 NEXMIFQ5QGS0 1516 aa17.57■□□□□ 0.4
H3F3B-212ENST00000592643 CERKQ8TCT0 537 aa17.56■□□□□ 0.4
H3F3B-212ENST00000592643 SLC26A8Q96RN1 970 aa17.56■□□□□ 0.4
H3F3B-212ENST00000592643 CCDC144AA2RUR9 1427 aa17.55■□□□□ 0.4
H3F3B-212ENST00000592643 ADAMTS13Q76LX8 1427 aa17.55■□□□□ 0.4
H3F3B-212ENST00000592643 STRCP1A6NGW2 1772 aa17.53■□□□□ 0.4
H3F3B-212ENST00000592643 ZNF326Q5BKZ1 582 aaKnown RBP17.52■□□□□ 0.4
H3F3B-212ENST00000592643 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.52■□□□□ 0.4
H3F3B-212ENST00000592643 NRXN3Q9Y4C0 1643 aa17.51■□□□□ 0.39
H3F3B-212ENST00000592643 PPP1R15AO75807 674 aaPredicted RBP17.49■□□□□ 0.39
H3F3B-212ENST00000592643 KIF1BO60333 1816 aa17.49■□□□□ 0.39
H3F3B-212ENST00000592643 HDGFP51858 240 aaKnown RBP17.48■□□□□ 0.39
H3F3B-212ENST00000592643 RGL3Q3MIN7 710 aa17.48■□□□□ 0.39
H3F3B-212ENST00000592643 TBX22Q9Y458 520 aa17.48■□□□□ 0.39
H3F3B-212ENST00000592643 SETBP1Q9Y6X0 1596 aa17.48■□□□□ 0.39
H3F3B-212ENST00000592643 MSH5O43196 834 aa17.47■□□□□ 0.39
H3F3B-212ENST00000592643 LRRC7Q96NW7 1537 aa17.47■□□□□ 0.39
H3F3B-212ENST00000592643 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
H3F3B-212ENST00000592643 RPGRIP1LQ68CZ1 1315 aa17.47■□□□□ 0.39
H3F3B-212ENST00000592643 ADGRF5Q8IZF2 1346 aa17.47■□□□□ 0.39
H3F3B-212ENST00000592643 DHX57Q6P158 1386 aaKnown RBP17.46■□□□□ 0.39
H3F3B-212ENST00000592643 CPS1P31327 1500 aa17.46■□□□□ 0.39
H3F3B-212ENST00000592643 METP08581 1390 aa17.45■□□□□ 0.38
H3F3B-212ENST00000592643 KCNA6P17658 529 aa17.45■□□□□ 0.38
H3F3B-212ENST00000592643 NWD1Q149M9 1564 aa17.45■□□□□ 0.38
H3F3B-212ENST00000592643 ILDR1Q86SU0 546 aaPredicted RBP17.44■□□□□ 0.38
H3F3B-212ENST00000592643 PPLO60437 1756 aa17.43■□□□□ 0.38
H3F3B-212ENST00000592643 BCANQ96GW7 911 aa17.43■□□□□ 0.38
H3F3B-212ENST00000592643 IQSEC2Q5JU85 1478 aa17.43■□□□□ 0.38
H3F3B-212ENST00000592643 IFT172Q9UG01 1749 aa17.42■□□□□ 0.38
H3F3B-212ENST00000592643 DIP2AQ14689 1571 aa17.42■□□□□ 0.38
H3F3B-212ENST00000592643 ALKQ9UM73 1620 aa17.42■□□□□ 0.38
H3F3B-212ENST00000592643 VGFO15240 615 aaPredicted RBP17.41■□□□□ 0.38
H3F3B-212ENST00000592643 FBXO41Q8TF61 875 aa17.41■□□□□ 0.38
H3F3B-212ENST00000592643 RBM33Q96EV2 1170 aaKnown RBP17.41■□□□□ 0.38
H3F3B-212ENST00000592643 NRXN1Q9ULB1 1477 aa17.41■□□□□ 0.38
H3F3B-212ENST00000592643 SETD1AO15047 1707 aaKnown RBP17.4■□□□□ 0.38
H3F3B-212ENST00000592643 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
H3F3B-212ENST00000592643 PIK3C2GO75747 1445 aa17.38■□□□□ 0.37
H3F3B-212ENST00000592643 TMEM94Q12767 1356 aa17.38■□□□□ 0.37
H3F3B-212ENST00000592643 CHD2O14647 1828 aaKnown RBP17.37■□□□□ 0.37
H3F3B-212ENST00000592643 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
H3F3B-212ENST00000592643 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
H3F3B-212ENST00000592643 PCGF6Q9BYE7 350 aa17.37■□□□□ 0.37
H3F3B-212ENST00000592643 XIRP1Q702N8 1843 aaKnown RBP17.37■□□□□ 0.37
H3F3B-212ENST00000592643 MYOM2P54296 1465 aa17.37■□□□□ 0.37
H3F3B-212ENST00000592643 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
H3F3B-212ENST00000592643 AMOTL2Q9Y2J4 779 aa17.36■□□□□ 0.37
H3F3B-212ENST00000592643 XRN1Q8IZH2 1706 aaKnown RBP17.35■□□□□ 0.37
H3F3B-212ENST00000592643 PROSER2Q86WR7 435 aaPredicted RBP17.33■□□□□ 0.36
H3F3B-212ENST00000592643 DCAF11Q8TEB1 546 aa17.32■□□□□ 0.36
H3F3B-212ENST00000592643 C14orf93Q9H972 538 aaKnown RBP17.32■□□□□ 0.36
H3F3B-212ENST00000592643 PRAG1Q86YV5 1406 aa17.31■□□□□ 0.36
H3F3B-212ENST00000592643 UBAP1LF5GYI3 381 aa17.31■□□□□ 0.36
H3F3B-212ENST00000592643 CFAP70Q5T0N1 1121 aa17.31■□□□□ 0.36
H3F3B-212ENST00000592643 ROBO2Q9HCK4 1378 aa17.3■□□□□ 0.36
H3F3B-212ENST00000592643 TMEM132EQ6IEE7 984 aa17.3■□□□□ 0.36
H3F3B-212ENST00000592643 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
H3F3B-212ENST00000592643 L3MBTL2Q969R5 705 aa17.27■□□□□ 0.36
H3F3B-212ENST00000592643 PTCH1Q13635 1447 aa17.27■□□□□ 0.35
H3F3B-212ENST00000592643 NCOA3Q9Y6Q9 1424 aa17.27■□□□□ 0.35
H3F3B-212ENST00000592643 ADGRB1O14514 1584 aa17.27■□□□□ 0.35
H3F3B-212ENST00000592643 LRPPRCP42704 1394 aaKnown RBP17.26■□□□□ 0.35
H3F3B-212ENST00000592643 TECPR2O15040 1411 aa17.25■□□□□ 0.35
H3F3B-212ENST00000592643 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
H3F3B-212ENST00000592643 ABCC11Q96J66 1382 aa17.24■□□□□ 0.35
H3F3B-212ENST00000592643 YTHDC2Q9H6S0 1430 aaKnown RBP17.23■□□□□ 0.35
H3F3B-212ENST00000592643 TOM1O60784 492 aa17.23■□□□□ 0.35
H3F3B-212ENST00000592643 PLEKHH1Q9ULM0 1364 aa17.23■□□□□ 0.35
H3F3B-212ENST00000592643 PIP4K2BP78356 416 aa17.22■□□□□ 0.35
H3F3B-212ENST00000592643 STAC3Q96MF2 364 aa17.22■□□□□ 0.35
H3F3B-212ENST00000592643 STK26Q9P289 416 aa17.22■□□□□ 0.35
H3F3B-212ENST00000592643 WAPLQ7Z5K2 1190 aa17.21■□□□□ 0.35
H3F3B-212ENST00000592643 MSH6P52701 1360 aa17.2■□□□□ 0.34
H3F3B-212ENST00000592643 C19orf44Q9H6X5 657 aa17.2■□□□□ 0.34
H3F3B-212ENST00000592643 ADGRL3Q9HAR2 1447 aa17.2■□□□□ 0.34
H3F3B-212ENST00000592643 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.19■□□□□ 0.34
H3F3B-212ENST00000592643 LAMC1P11047 1609 aa17.19■□□□□ 0.34
H3F3B-212ENST00000592643 NBPF1Q3BBV0 1214 aa17.19■□□□□ 0.34
H3F3B-212ENST00000592643 NALCNQ8IZF0 1738 aa17.18■□□□□ 0.34
H3F3B-212ENST00000592643 NBPF8Q3BBV2 869 aa17.17■□□□□ 0.34
H3F3B-212ENST00000592643 KNDC1Q76NI1 1749 aa17.16■□□□□ 0.34
H3F3B-212ENST00000592643 DCCP43146 1447 aa17.16■□□□□ 0.34
H3F3B-212ENST00000592643 FAM135BQ49AJ0 1406 aa17.16■□□□□ 0.34
H3F3B-212ENST00000592643 PIAS4Q8N2W9 510 aaPredicted RBP17.16■□□□□ 0.34
H3F3B-212ENST00000592643 SIRT1Q96EB6 747 aa17.16■□□□□ 0.34
H3F3B-212ENST00000592643 SLAIN2Q9P270 581 aa17.16■□□□□ 0.34
H3F3B-212ENST00000592643 MST1RQ04912 1400 aa17.15■□□□□ 0.34
H3F3B-212ENST00000592643 HSPA1LP34931 641 aa17.15■□□□□ 0.34
H3F3B-212ENST00000592643 C14orf37Q86TY3 774 aa17.15■□□□□ 0.34
H3F3B-212ENST00000592643 DLC1Q96QB1 1528 aa17.14■□□□□ 0.33
H3F3B-212ENST00000592643 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms