RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 BRINP3Q76B58 766 aa11.91□□□□□ -0.5
VAT1-209ENST00000592388 CADPS2Q86UW7 1296 aa11.91□□□□□ -0.5
VAT1-209ENST00000592388 DIP2AQ14689 1571 aa11.91□□□□□ -0.5
VAT1-209ENST00000592388 PIK3C2BO00750 1634 aa11.9□□□□□ -0.5
VAT1-209ENST00000592388 ADAMTS2O95450 1211 aa11.9□□□□□ -0.5
VAT1-209ENST00000592388 TSPY4P0CV99 314 aa11.9□□□□□ -0.5
VAT1-209ENST00000592388 TSPY10P0CW01 314 aa11.9□□□□□ -0.5
VAT1-209ENST00000592388 CCDC125Q86Z20 511 aa11.9□□□□□ -0.5
VAT1-209ENST00000592388 RSPH4AQ5TD94 716 aa11.89□□□□□ -0.51
VAT1-209ENST00000592388 EP400Q96L91 3159 aa11.89□□□□□ -0.51
VAT1-209ENST00000592388 CEP152O94986 1710 aa11.89□□□□□ -0.51
VAT1-209ENST00000592388 IDI1Q13907 227 aa11.88□□□□□ -0.51
VAT1-209ENST00000592388 C19orf44Q9H6X5 657 aa11.88□□□□□ -0.51
VAT1-209ENST00000592388 EFCAB6Q5THR3 1501 aa11.87□□□□□ -0.51
VAT1-209ENST00000592388 USP21Q9UK80 565 aa11.87□□□□□ -0.51
VAT1-209ENST00000592388 CAMSAP2Q08AD1 1489 aa11.87□□□□□ -0.51
VAT1-209ENST00000592388 MAST1Q9Y2H9 1570 aa11.87□□□□□ -0.51
VAT1-209ENST00000592388 DEFB132Q7Z7B7 95 aa11.86□□□□□ -0.51
VAT1-209ENST00000592388 LRRC59Q96AG4 307 aaKnown RBP11.86□□□□□ -0.51
VAT1-209ENST00000592388 TRPC5Q9UL62 973 aaPredicted RBP11.86□□□□□ -0.51
VAT1-209ENST00000592388 MROH1Q8NDA8 1641 aa11.86□□□□□ -0.51
VAT1-209ENST00000592388 SETD5Q9C0A6 1442 aa11.86□□□□□ -0.51
VAT1-209ENST00000592388 YY1P25490 414 aa11.85□□□□□ -0.51
VAT1-209ENST00000592388 LRP5O75197 1615 aa11.85□□□□□ -0.51
VAT1-209ENST00000592388 NCOA3Q9Y6Q9 1424 aa11.85□□□□□ -0.51
VAT1-209ENST00000592388 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.84□□□□□ -0.51
VAT1-209ENST00000592388 PSDA5PKW4 1024 aaPredicted RBP11.84□□□□□ -0.51
VAT1-209ENST00000592388 DDX17Q92841 729 aaKnown RBP11.84□□□□□ -0.51
VAT1-209ENST00000592388 ARHGAP31Q2M1Z3 1444 aa11.84□□□□□ -0.51
VAT1-209ENST00000592388 PNPLA6Q8IY17 1366 aa11.83□□□□□ -0.52
VAT1-209ENST00000592388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.83□□□□□ -0.52
VAT1-209ENST00000592388 CHD2O14647 1828 aaKnown RBP11.83□□□□□ -0.52
VAT1-209ENST00000592388 IFFO2Q5TF58 517 aa11.82□□□□□ -0.52
VAT1-209ENST00000592388 PPP1R15AO75807 674 aaPredicted RBP11.81□□□□□ -0.52
VAT1-209ENST00000592388 ASXL1Q8IXJ9 1541 aa11.81□□□□□ -0.52
VAT1-209ENST00000592388 BLMP54132 1417 aaPredicted RBP11.8□□□□□ -0.52
VAT1-209ENST00000592388 EIF2AK4Q9P2K8 1649 aaKnown RBP11.8□□□□□ -0.52
VAT1-209ENST00000592388 HRCP23327 699 aa11.8□□□□□ -0.52
VAT1-209ENST00000592388 SF3B2Q13435 895 aaKnown RBP11.79□□□□□ -0.52
VAT1-209ENST00000592388 FNBP4Q8N3X1 1017 aaPredicted RBP11.79□□□□□ -0.52
VAT1-209ENST00000592388 TBX22Q9Y458 520 aa11.79□□□□□ -0.52
VAT1-209ENST00000592388 PLEKHG1Q9ULL1 1385 aa11.79□□□□□ -0.52
VAT1-209ENST00000592388 ATRNO75882 1429 aa11.78□□□□□ -0.52
VAT1-209ENST00000592388 VPS8Q8N3P4 1428 aa11.78□□□□□ -0.52
VAT1-209ENST00000592388 ARHGEF5Q12774 1597 aa11.78□□□□□ -0.52
VAT1-209ENST00000592388 LOC105371045A0A1W2PR82 267 aa11.77□□□□□ -0.53
VAT1-209ENST00000592388 ADGRB3O60242 1522 aa11.76□□□□□ -0.53
VAT1-209ENST00000592388 NHSL1Q5SYE7 1610 aa11.76□□□□□ -0.53
VAT1-209ENST00000592388 AMOTL2Q9Y2J4 779 aa11.75□□□□□ -0.53
VAT1-209ENST00000592388 MST1RQ04912 1400 aa11.75□□□□□ -0.53
VAT1-209ENST00000592388 CROCC2H7BZ55 1655 aa11.75□□□□□ -0.53
VAT1-209ENST00000592388 HDGFP51858 240 aaKnown RBP11.74□□□□□ -0.53
VAT1-209ENST00000592388 GJD4Q96KN9 370 aaPredicted RBP11.74□□□□□ -0.53
VAT1-209ENST00000592388 ZFYVE9O95405 1425 aa11.74□□□□□ -0.53
VAT1-209ENST00000592388 RIMS2Q9UQ26 1411 aa11.74□□□□□ -0.53
VAT1-209ENST00000592388 SLC52A1Q9NWF4 448 aa11.73□□□□□ -0.53
VAT1-209ENST00000592388 DUOX2Q9NRD8 1548 aa11.72□□□□□ -0.53
VAT1-209ENST00000592388 ADAMTS13Q76LX8 1427 aa11.72□□□□□ -0.53
VAT1-209ENST00000592388 KANK1Q14678 1352 aa11.72□□□□□ -0.53
VAT1-209ENST00000592388 BCL9LQ86UU0 1499 aa11.71□□□□□ -0.53
VAT1-209ENST00000592388 NOS1P29475 1434 aa11.71□□□□□ -0.53
VAT1-209ENST00000592388 DCCP43146 1447 aa11.71□□□□□ -0.53
VAT1-209ENST00000592388 PTCH1Q13635 1447 aa11.71□□□□□ -0.53
VAT1-209ENST00000592388 RRP7BPQ9NSQ0 103 aa11.71□□□□□ -0.53
VAT1-209ENST00000592388 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
VAT1-209ENST00000592388 CHGAP10645 457 aaKnown RBP11.7□□□□□ -0.54
VAT1-209ENST00000592388 R3HDM1Q15032 1099 aaKnown RBP11.7□□□□□ -0.54
VAT1-209ENST00000592388 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
VAT1-209ENST00000592388 PIK3R4Q99570 1358 aa11.69□□□□□ -0.54
VAT1-209ENST00000592388 KIF15Q9NS87 1388 aa11.69□□□□□ -0.54
VAT1-209ENST00000592388 KANK4Q5T7N3 995 aaPredicted RBP11.69□□□□□ -0.54
VAT1-209ENST00000592388 BAG6P46379 1132 aa11.68□□□□□ -0.54
VAT1-209ENST00000592388 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.68□□□□□ -0.54
VAT1-209ENST00000592388 PTPN23Q9H3S7 1636 aa11.68□□□□□ -0.54
VAT1-209ENST00000592388 MYOM3Q5VTT5 1437 aa11.67□□□□□ -0.54
VAT1-209ENST00000592388 ERBINQ96RT1 1412 aa11.67□□□□□ -0.54
VAT1-209ENST00000592388 MYO5BQ9ULV0 1848 aa11.67□□□□□ -0.54
VAT1-209ENST00000592388 SOS2Q07890 1332 aaPredicted RBP11.66□□□□□ -0.54
VAT1-209ENST00000592388 SEPT12Q8IYM1 358 aa11.66□□□□□ -0.54
VAT1-209ENST00000592388 TRPM2O94759 1503 aa11.65□□□□□ -0.54
VAT1-209ENST00000592388 RALGAPBQ86X10 1494 aa11.65□□□□□ -0.54
VAT1-209ENST00000592388 EN1Q05925 392 aaPredicted RBP11.65□□□□□ -0.54
VAT1-209ENST00000592388 ORAI2Q96SN7 254 aa11.65□□□□□ -0.54
VAT1-209ENST00000592388 LMTK2Q8IWU2 1503 aa11.65□□□□□ -0.55
VAT1-209ENST00000592388 UNC13BO14795 1591 aa11.64□□□□□ -0.55
VAT1-209ENST00000592388 UNC5CLQ8IV45 518 aa11.64□□□□□ -0.55
VAT1-209ENST00000592388 BRWD3Q6RI45 1802 aa11.64□□□□□ -0.55
VAT1-209ENST00000592388 GLI3P10071 1580 aa11.63□□□□□ -0.55
VAT1-209ENST00000592388 GCC2Q8IWJ2 1684 aa11.63□□□□□ -0.55
VAT1-209ENST00000592388 KRT27Q7Z3Y8 459 aa11.63□□□□□ -0.55
VAT1-209ENST00000592388 C1orf167Q5SNV9 1468 aa11.63□□□□□ -0.55
VAT1-209ENST00000592388 TMEM131LA2VDJ0 1609 aa11.62□□□□□ -0.55
VAT1-209ENST00000592388 DCAF8L1A6NGE4 600 aa11.62□□□□□ -0.55
VAT1-209ENST00000592388 ADGRL3Q9HAR2 1447 aa11.61□□□□□ -0.55
VAT1-209ENST00000592388 MYOM2P54296 1465 aa11.61□□□□□ -0.55
VAT1-209ENST00000592388 ZNF784Q8NCA9 323 aaPredicted RBP11.6□□□□□ -0.55
VAT1-209ENST00000592388 CCDC9Q9Y3X0 531 aaKnown RBP11.59□□□□□ -0.55
VAT1-209ENST00000592388 ABCC5O15440 1437 aa11.59□□□□□ -0.55
VAT1-209ENST00000592388 COL22A1Q8NFW1 1626 aaPredicted RBP11.58□□□□□ -0.56
VAT1-209ENST00000592388 A0A0G2JS52 829 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms