RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 CNGB1Q14028 1251 aaPredicted RBP15.53■□□□□ 0.08
TPM4-213ENST00000591226 MRS2Q9HD23 443 aa15.53■□□□□ 0.08
TPM4-213ENST00000591226 IQGAP1P46940 1657 aa15.53■□□□□ 0.08
TPM4-213ENST00000591226 CAMSAP1Q5T5Y3 1602 aa15.53■□□□□ 0.08
TPM4-213ENST00000591226 DISP3Q9P2K9 1392 aa15.52■□□□□ 0.08
TPM4-213ENST00000591226 IFT172Q9UG01 1749 aa15.52■□□□□ 0.07
TPM4-213ENST00000591226 MYOM2P54296 1465 aa15.51■□□□□ 0.07
TPM4-213ENST00000591226 ADGRB3O60242 1522 aa15.51■□□□□ 0.07
TPM4-213ENST00000591226 ZMYM4Q5VZL5 1548 aa15.51■□□□□ 0.07
TPM4-213ENST00000591226 HNRNPUQ00839 825 aaKnown RBP eCLIP15.51■□□□□ 0.07
TPM4-213ENST00000591226 KIAA1210Q9ULL0 1709 aa15.5■□□□□ 0.07
TPM4-213ENST00000591226 SIGLEC1Q9BZZ2 1709 aa15.49■□□□□ 0.07
TPM4-213ENST00000591226 ADGRF5Q8IZF2 1346 aa15.48■□□□□ 0.07
TPM4-213ENST00000591226 SCAF11Q99590 1463 aaKnown RBP15.48■□□□□ 0.07
TPM4-213ENST00000591226 TULP1O00294 542 aaPredicted RBP15.48■□□□□ 0.07
TPM4-213ENST00000591226 CHGAP10645 457 aaKnown RBP15.48■□□□□ 0.07
TPM4-213ENST00000591226 FAM9BQ8IZU0 186 aa15.48■□□□□ 0.07
TPM4-213ENST00000591226 TMF1P82094 1093 aa15.47■□□□□ 0.07
TPM4-213ENST00000591226 ZC3H13Q5T200 1668 aaKnown RBP15.47■□□□□ 0.07
TPM4-213ENST00000591226 NOS1P29475 1434 aa15.46■□□□□ 0.07
TPM4-213ENST00000591226 NRXN1Q9ULB1 1477 aa15.45■□□□□ 0.06
TPM4-213ENST00000591226 SYNMO15061 1565 aa15.45■□□□□ 0.06
TPM4-213ENST00000591226 CFAP70Q5T0N1 1121 aa15.45■□□□□ 0.06
TPM4-213ENST00000591226 TPRNQ4KMQ1 711 aa15.44■□□□□ 0.06
TPM4-213ENST00000591226 PPLO60437 1756 aa15.44■□□□□ 0.06
TPM4-213ENST00000591226 PIK3C2BO00750 1634 aa15.43■□□□□ 0.06
TPM4-213ENST00000591226 ARHGAP31Q2M1Z3 1444 aa15.43■□□□□ 0.06
TPM4-213ENST00000591226 ARXQ96QS3 562 aa15.43■□□□□ 0.06
TPM4-213ENST00000591226 SUPT16HQ9Y5B9 1047 aaKnown RBP15.43■□□□□ 0.06
TPM4-213ENST00000591226 KIF13AQ9H1H9 1805 aa15.43■□□□□ 0.06
TPM4-213ENST00000591226 EIF3AQ14152 1382 aaKnown RBP15.42■□□□□ 0.06
TPM4-213ENST00000591226 BCANQ96GW7 911 aa15.41■□□□□ 0.06
TPM4-213ENST00000591226 PER1O15534 1290 aaPredicted RBP15.4■□□□□ 0.06
TPM4-213ENST00000591226 KTN1Q86UP2 1357 aaKnown RBP15.4■□□□□ 0.06
TPM4-213ENST00000591226 RALBP1Q15311 655 aa15.4■□□□□ 0.06
TPM4-213ENST00000591226 PANK3Q9H999 370 aa15.4■□□□□ 0.06
TPM4-213ENST00000591226 PIK3C2GO75747 1445 aa15.39■□□□□ 0.05
TPM4-213ENST00000591226 MYBBP1AQ9BQG0 1328 aaKnown RBP15.39■□□□□ 0.05
TPM4-213ENST00000591226 REREQ9P2R6 1566 aa15.39■□□□□ 0.05
TPM4-213ENST00000591226 PREX1Q8TCU6 1659 aa15.38■□□□□ 0.05
TPM4-213ENST00000591226 PARD3Q8TEW0 1356 aa15.38■□□□□ 0.05
TPM4-213ENST00000591226 RPGRIP1LQ68CZ1 1315 aa15.37■□□□□ 0.05
TPM4-213ENST00000591226 SETBP1Q9Y6X0 1596 aa15.37■□□□□ 0.05
TPM4-213ENST00000591226 TMC1Q8TDI8 760 aa15.37■□□□□ 0.05
TPM4-213ENST00000591226 AGLP35573 1532 aa15.36■□□□□ 0.05
TPM4-213ENST00000591226 BRD4O60885 1362 aaPredicted RBP15.36■□□□□ 0.05
TPM4-213ENST00000591226 NEXMIFQ5QGS0 1516 aa15.36■□□□□ 0.05
TPM4-213ENST00000591226 IDI1Q13907 227 aa15.36■□□□□ 0.05
TPM4-213ENST00000591226 ANP32EQ9BTT0 268 aa15.35■□□□□ 0.05
TPM4-213ENST00000591226 ZBED9Q6R2W3 1325 aa15.35■□□□□ 0.05
TPM4-213ENST00000591226 PLCB2Q00722 1185 aa15.35■□□□□ 0.05
TPM4-213ENST00000591226 CDCA8Q53HL2 280 aa15.35■□□□□ 0.05
TPM4-213ENST00000591226 PNISRQ8TF01 805 aaKnown RBP15.35■□□□□ 0.05
TPM4-213ENST00000591226 MYO3AQ8NEV4 1616 aa15.34■□□□□ 0.05
TPM4-213ENST00000591226 MYOM1P52179 1685 aa15.34■□□□□ 0.05
TPM4-213ENST00000591226 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
TPM4-213ENST00000591226 ADGRB1O14514 1584 aa15.34■□□□□ 0.05
TPM4-213ENST00000591226 CC2D1BQ5T0F9 858 aaKnown RBP15.34■□□□□ 0.05
TPM4-213ENST00000591226 NUTM2DQ5VT03 806 aaPredicted RBP15.34■□□□□ 0.05
TPM4-213ENST00000591226 KDM5AP29375 1690 aaKnown RBP15.34■□□□□ 0.05
TPM4-213ENST00000591226 ARHGEF40Q8TER5 1519 aa15.33■□□□□ 0.05
TPM4-213ENST00000591226 SLC52A1Q9NWF4 448 aa15.33■□□□□ 0.05
TPM4-213ENST00000591226 MYO5BQ9ULV0 1848 aa15.33■□□□□ 0.04
TPM4-213ENST00000591226 ERVK-7P63135 1459 aa15.33■□□□□ 0.04
TPM4-213ENST00000591226 FKBP8Q14318 412 aa15.33■□□□□ 0.04
TPM4-213ENST00000591226 FBXO31Q5XUX0 539 aaPredicted RBP15.32■□□□□ 0.04
TPM4-213ENST00000591226 TMEM131LA2VDJ0 1609 aa15.31■□□□□ 0.04
TPM4-213ENST00000591226 CLTCQ00610 1675 aaKnown RBP15.31■□□□□ 0.04
TPM4-213ENST00000591226 NLRP13Q86W25 1043 aa15.31■□□□□ 0.04
TPM4-213ENST00000591226 TMEM132EQ6IEE7 984 aa15.3■□□□□ 0.04
TPM4-213ENST00000591226 ERICH6Q7L0X2 663 aa15.3■□□□□ 0.04
TPM4-213ENST00000591226 TRAK1Q9UPV9 953 aa15.3■□□□□ 0.04
TPM4-213ENST00000591226 VGFO15240 615 aaPredicted RBP15.3■□□□□ 0.04
TPM4-213ENST00000591226 NEFLP07196 543 aa15.3■□□□□ 0.04
TPM4-213ENST00000591226 LRPPRCP42704 1394 aaKnown RBP15.3■□□□□ 0.04
TPM4-213ENST00000591226 CENPJQ9HC77 1338 aaPredicted RBP15.3■□□□□ 0.04
TPM4-213ENST00000591226 SBNO2Q9Y2G9 1366 aa15.29■□□□□ 0.04
TPM4-213ENST00000591226 MLECQ14165 292 aa15.29■□□□□ 0.04
TPM4-213ENST00000591226 QRICH2Q9H0J4 1663 aa15.28■□□□□ 0.04
TPM4-213ENST00000591226 HAP1P54257 671 aaPredicted RBP15.28■□□□□ 0.04
TPM4-213ENST00000591226 PPP6R1Q9UPN7 881 aa15.28■□□□□ 0.04
TPM4-213ENST00000591226 KNSTRNQ9Y448 316 aa15.28■□□□□ 0.04
TPM4-213ENST00000591226 ZFYVE9O95405 1425 aa15.27■□□□□ 0.03
TPM4-213ENST00000591226 ASXL1Q8IXJ9 1541 aa15.25■□□□□ 0.03
TPM4-213ENST00000591226 SENP3-EIF4A1A0A087X0R7 540 aa15.25■□□□□ 0.03
TPM4-213ENST00000591226 SENP3Q9H4L4 574 aaPredicted RBP15.25■□□□□ 0.03
TPM4-213ENST00000591226 SPATA31D1Q6ZQQ2 1576 aa15.24■□□□□ 0.03
TPM4-213ENST00000591226 ARHGEF28Q8N1W1 1705 aaKnown RBP15.24■□□□□ 0.03
TPM4-213ENST00000591226 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
TPM4-213ENST00000591226 NPC1L1Q9UHC9 1359 aa15.2■□□□□ 0.02
TPM4-213ENST00000591226 PPP2R1AP30153 589 aa15.2■□□□□ 0.02
TPM4-213ENST00000591226 CARD14Q9BXL6 1004 aa15.2■□□□□ 0.02
TPM4-213ENST00000591226 SMG6Q86US8 1419 aaKnown RBP15.19■□□□□ 0.02
TPM4-213ENST00000591226 A2ML1A8K2U0 1454 aa15.19■□□□□ 0.02
TPM4-213ENST00000591226 TULP4Q9NRJ4 1543 aa15.18■□□□□ 0.02
TPM4-213ENST00000591226 IRX6P78412 446 aaPredicted RBP15.18■□□□□ 0.02
TPM4-213ENST00000591226 STK26Q9P289 416 aa15.18■□□□□ 0.02
TPM4-213ENST00000591226 ESF1Q9H501 851 aaKnown RBP15.18■□□□□ 0.02
TPM4-213ENST00000591226 ZMYM3Q14202 1370 aa15.17■□□□□ 0.02
TPM4-213ENST00000591226 ALKQ9UM73 1620 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms