RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 TMEM131LA2VDJ0 1609 aa13.98□□□□□ -0.17
PTPN2-210ENST00000591115 SPATA31E1Q6ZUB1 1445 aa13.98□□□□□ -0.17
PTPN2-210ENST00000591115 RALGAPBQ86X10 1494 aa13.97□□□□□ -0.17
PTPN2-210ENST00000591115 IFT172Q9UG01 1749 aa13.97□□□□□ -0.17
PTPN2-210ENST00000591115 HIRIP3Q9BW71 556 aaPredicted RBP13.97□□□□□ -0.17
PTPN2-210ENST00000591115 CEP170BQ9Y4F5 1589 aaPredicted RBP13.96□□□□□ -0.17
PTPN2-210ENST00000591115 KDM5AP29375 1690 aaKnown RBP13.95□□□□□ -0.18
PTPN2-210ENST00000591115 NLRP1Q9C000 1473 aa13.94□□□□□ -0.18
PTPN2-210ENST00000591115 PPLO60437 1756 aa13.94□□□□□ -0.18
PTPN2-210ENST00000591115 NEURL4Q96JN8 1562 aa13.94□□□□□ -0.18
PTPN2-210ENST00000591115 SETD1BQ9UPS6 1966 aaKnown RBP13.94□□□□□ -0.18
PTPN2-210ENST00000591115 IDI1Q13907 227 aa13.93□□□□□ -0.18
PTPN2-210ENST00000591115 WASHC2AQ641Q2 1341 aa13.91□□□□□ -0.18
PTPN2-210ENST00000591115 DCAF11Q8TEB1 546 aa13.91□□□□□ -0.18
PTPN2-210ENST00000591115 STAC3Q96MF2 364 aa13.91□□□□□ -0.18
PTPN2-210ENST00000591115 SLC52A1Q9NWF4 448 aa13.91□□□□□ -0.18
PTPN2-210ENST00000591115 A2ML1A8K2U0 1454 aa13.91□□□□□ -0.18
PTPN2-210ENST00000591115 NEXMIFQ5QGS0 1516 aa13.91□□□□□ -0.18
PTPN2-210ENST00000591115 CHGAP10645 457 aaKnown RBP13.9□□□□□ -0.18
PTPN2-210ENST00000591115 PRAG1Q86YV5 1406 aa13.9□□□□□ -0.18
PTPN2-210ENST00000591115 USP47Q96K76 1375 aa13.9□□□□□ -0.18
PTPN2-210ENST00000591115 CCDC7Q96M83 1385 aa13.9□□□□□ -0.18
PTPN2-210ENST00000591115 POLR1AO95602 1720 aaPredicted RBP13.9□□□□□ -0.19
PTPN2-210ENST00000591115 ANP32CO43423 234 aa13.89□□□□□ -0.19
PTPN2-210ENST00000591115 RGL3Q3MIN7 710 aa13.89□□□□□ -0.19
PTPN2-210ENST00000591115 CCER2I3L3R5 266 aa13.88□□□□□ -0.19
PTPN2-210ENST00000591115 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
PTPN2-210ENST00000591115 GPRASP1Q5JY77 1395 aa13.87□□□□□ -0.19
PTPN2-210ENST00000591115 LAMC1P11047 1609 aa13.86□□□□□ -0.19
PTPN2-210ENST00000591115 TRPM1Q7Z4N2 1603 aa13.86□□□□□ -0.19
PTPN2-210ENST00000591115 CARD11Q9BXL7 1154 aa13.86□□□□□ -0.19
PTPN2-210ENST00000591115 STAG3Q9UJ98 1225 aa13.86□□□□□ -0.19
PTPN2-210ENST00000591115 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
PTPN2-210ENST00000591115 MYOM2P54296 1465 aa13.85□□□□□ -0.19
PTPN2-210ENST00000591115 ZFYVE9O95405 1425 aa13.84□□□□□ -0.19
PTPN2-210ENST00000591115 LMTK3Q96Q04 1460 aa13.84□□□□□ -0.19
PTPN2-210ENST00000591115 ROCK2O75116 1388 aaKnown RBP13.84□□□□□ -0.19
PTPN2-210ENST00000591115 SLIT1O75093 1534 aa13.83□□□□□ -0.19
PTPN2-210ENST00000591115 C11orf95C9JLR9 678 aaPredicted RBP13.83□□□□□ -0.2
PTPN2-210ENST00000591115 YTHDC1Q96MU7 727 aaKnown RBP13.83□□□□□ -0.2
PTPN2-210ENST00000591115 IQGAP1P46940 1657 aa13.83□□□□□ -0.2
PTPN2-210ENST00000591115 KIF7Q2M1P5 1343 aa13.83□□□□□ -0.2
PTPN2-210ENST00000591115 RIMS2Q9UQ26 1411 aa13.83□□□□□ -0.2
PTPN2-210ENST00000591115 ARHGAP23Q9P227 1491 aa13.83□□□□□ -0.2
PTPN2-210ENST00000591115 TMEM2Q9UHN6 1383 aa13.82□□□□□ -0.2
PTPN2-210ENST00000591115 NUTM2DQ5VT03 806 aaPredicted RBP13.82□□□□□ -0.2
PTPN2-210ENST00000591115 RNF39Q9H2S5 420 aa13.82□□□□□ -0.2
PTPN2-210ENST00000591115 NRXN3Q9Y4C0 1643 aa13.81□□□□□ -0.2
PTPN2-210ENST00000591115 NRXN1Q9ULB1 1477 aa13.81□□□□□ -0.2
PTPN2-210ENST00000591115 SETD1AO15047 1707 aaKnown RBP13.79□□□□□ -0.2
PTPN2-210ENST00000591115 PIK3C2GO75747 1445 aa13.79□□□□□ -0.2
PTPN2-210ENST00000591115 SCAF11Q99590 1463 aaKnown RBP13.78□□□□□ -0.2
PTPN2-210ENST00000591115 KIAA1210Q9ULL0 1709 aa13.78□□□□□ -0.2
PTPN2-210ENST00000591115 RPGRIP1LQ68CZ1 1315 aa13.78□□□□□ -0.2
PTPN2-210ENST00000591115 ADGRF5Q8IZF2 1346 aa13.78□□□□□ -0.2
PTPN2-210ENST00000591115 THEMISQ8N1K5 641 aaPredicted RBP13.77□□□□□ -0.21
PTPN2-210ENST00000591115 SETBP1Q9Y6X0 1596 aa13.76□□□□□ -0.21
PTPN2-210ENST00000591115 ST20-MTHFSA0A0A6YYL1 179 aa13.76□□□□□ -0.21
PTPN2-210ENST00000591115 STRCQ7RTU9 1775 aa13.76□□□□□ -0.21
PTPN2-210ENST00000591115 LTKP29376 864 aa13.75□□□□□ -0.21
PTPN2-210ENST00000591115 HSPA2P54652 639 aa13.75□□□□□ -0.21
PTPN2-210ENST00000591115 ASXL1Q8IXJ9 1541 aa13.75□□□□□ -0.21
PTPN2-210ENST00000591115 NBPF1Q3BBV0 1214 aa13.75□□□□□ -0.21
PTPN2-210ENST00000591115 ALKQ9UM73 1620 aa13.73□□□□□ -0.21
PTPN2-210ENST00000591115 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
PTPN2-210ENST00000591115 VGFO15240 615 aaPredicted RBP13.72□□□□□ -0.21
PTPN2-210ENST00000591115 TXNDC2Q86VQ3 553 aa13.72□□□□□ -0.21
PTPN2-210ENST00000591115 PLEKHG1Q9ULL1 1385 aa13.72□□□□□ -0.21
PTPN2-210ENST00000591115 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTPN2-210ENST00000591115 PRKRIP1Q9H875 184 aaPredicted RBP13.72□□□□□ -0.21
PTPN2-210ENST00000591115 EID1Q9Y6B2 187 aa13.72□□□□□ -0.21
PTPN2-210ENST00000591115 ADGRB1O14514 1584 aa13.71□□□□□ -0.21
PTPN2-210ENST00000591115 DIP2AQ14689 1571 aa13.71□□□□□ -0.22
PTPN2-210ENST00000591115 ADAMTS13Q76LX8 1427 aa13.7□□□□□ -0.22
PTPN2-210ENST00000591115 NCKAP5LQ9HCH0 1330 aa13.7□□□□□ -0.22
PTPN2-210ENST00000591115 MED14O60244 1454 aa13.69□□□□□ -0.22
PTPN2-210ENST00000591115 CFAP70Q5T0N1 1121 aa13.69□□□□□ -0.22
PTPN2-210ENST00000591115 NPHP4O75161 1426 aaPredicted RBP13.69□□□□□ -0.22
PTPN2-210ENST00000591115 ANKLE2Q86XL3 938 aa13.68□□□□□ -0.22
PTPN2-210ENST00000591115 TESK2Q96S53 571 aa13.68□□□□□ -0.22
PTPN2-210ENST00000591115 ARHGEF28Q8N1W1 1705 aaKnown RBP13.68□□□□□ -0.22
PTPN2-210ENST00000591115 SLC24A1O60721 1099 aa13.68□□□□□ -0.22
PTPN2-210ENST00000591115 HDGFP51858 240 aaKnown RBP13.67□□□□□ -0.22
PTPN2-210ENST00000591115 BCANQ96GW7 911 aa13.67□□□□□ -0.22
PTPN2-210ENST00000591115 EIF3AQ14152 1382 aaKnown RBP13.66□□□□□ -0.22
PTPN2-210ENST00000591115 KTN1Q86UP2 1357 aaKnown RBP13.66□□□□□ -0.22
PTPN2-210ENST00000591115 KNDC1Q76NI1 1749 aa13.66□□□□□ -0.22
PTPN2-210ENST00000591115 TMF1P82094 1093 aa13.66□□□□□ -0.22
PTPN2-210ENST00000591115 METP08581 1390 aa13.66□□□□□ -0.22
PTPN2-210ENST00000591115 HOXD11P31277 338 aaPredicted RBP13.65□□□□□ -0.22
PTPN2-210ENST00000591115 SLC26A8Q96RN1 970 aa13.65□□□□□ -0.22
PTPN2-210ENST00000591115 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
PTPN2-210ENST00000591115 XRN1Q8IZH2 1706 aaKnown RBP13.65□□□□□ -0.22
PTPN2-210ENST00000591115 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
PTPN2-210ENST00000591115 GTF3C3Q9Y5Q9 886 aa13.64□□□□□ -0.23
PTPN2-210ENST00000591115 CHD2O14647 1828 aaKnown RBP13.64□□□□□ -0.23
PTPN2-210ENST00000591115 TMEM132EQ6IEE7 984 aa13.64□□□□□ -0.23
PTPN2-210ENST00000591115 QRICH2Q9H0J4 1663 aa13.63□□□□□ -0.23
PTPN2-210ENST00000591115 CDCA8Q53HL2 280 aa13.63□□□□□ -0.23
PTPN2-210ENST00000591115 STRCP1A6NGW2 1772 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms