RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 RIMS2Q9UQ26 1411 aa31.03■■■□□ 2.56
CIRBP-229ENST00000590704 KIF1BO60333 1816 aa31.02■■■□□ 2.56
CIRBP-229ENST00000590704 NPHP4O75161 1426 aaPredicted RBP30.99■■■□□ 2.55
CIRBP-229ENST00000590704 DMRT2Q9Y5R5 561 aa30.99■■■□□ 2.55
CIRBP-229ENST00000590704 NUTM2DQ5VT03 806 aaPredicted RBP30.97■■■□□ 2.55
CIRBP-229ENST00000590704 NEXMIFQ5QGS0 1516 aa30.97■■■□□ 2.55
CIRBP-229ENST00000590704 EID1Q9Y6B2 187 aa30.95■■■□□ 2.55
CIRBP-229ENST00000590704 IQGAP1P46940 1657 aa30.92■■■□□ 2.54
CIRBP-229ENST00000590704 ZNF326Q5BKZ1 582 aaKnown RBP30.9■■■□□ 2.54
CIRBP-229ENST00000590704 PLEKHG1Q9ULL1 1385 aa30.9■■■□□ 2.54
CIRBP-229ENST00000590704 RGL3Q3MIN7 710 aa30.89■■■□□ 2.54
CIRBP-229ENST00000590704 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.89■■■□□ 2.54
CIRBP-229ENST00000590704 RPGRIP1LQ68CZ1 1315 aa30.88■■■□□ 2.53
CIRBP-229ENST00000590704 HDGFP51858 240 aaKnown RBP30.86■■■□□ 2.53
CIRBP-229ENST00000590704 ADAMTS13Q76LX8 1427 aa30.86■■■□□ 2.53
CIRBP-229ENST00000590704 SIN3AQ96ST3 1273 aa30.86■■■□□ 2.53
CIRBP-229ENST00000590704 SENP3Q9H4L4 574 aaPredicted RBP30.85■■■□□ 2.53
CIRBP-229ENST00000590704 PPLO60437 1756 aa30.85■■■□□ 2.53
CIRBP-229ENST00000590704 ZNF335Q9H4Z2 1342 aaPredicted RBP30.84■■■□□ 2.53
CIRBP-229ENST00000590704 SLC26A8Q96RN1 970 aa30.83■■■□□ 2.53
CIRBP-229ENST00000590704 NRXN3Q9Y4C0 1643 aa30.83■■■□□ 2.53
CIRBP-229ENST00000590704 IFT172Q9UG01 1749 aa30.83■■■□□ 2.53
CIRBP-229ENST00000590704 LTBP4Q8N2S1 1624 aa30.83■■■□□ 2.53
CIRBP-229ENST00000590704 ADGRF5Q8IZF2 1346 aa30.81■■■□□ 2.52
CIRBP-229ENST00000590704 PPP1R15AO75807 674 aaPredicted RBP30.79■■■□□ 2.52
CIRBP-229ENST00000590704 SETBP1Q9Y6X0 1596 aa30.78■■■□□ 2.52
CIRBP-229ENST00000590704 VGFO15240 615 aaPredicted RBP30.77■■■□□ 2.52
CIRBP-229ENST00000590704 TBX22Q9Y458 520 aa30.77■■■□□ 2.52
CIRBP-229ENST00000590704 STRCP1A6NGW2 1772 aa30.77■■■□□ 2.52
CIRBP-229ENST00000590704 FBXO41Q8TF61 875 aa30.75■■■□□ 2.51
CIRBP-229ENST00000590704 NRXN1Q9ULB1 1477 aa30.72■■■□□ 2.51
CIRBP-229ENST00000590704 SETD1AO15047 1707 aaKnown RBP30.69■■■□□ 2.5
CIRBP-229ENST00000590704 METP08581 1390 aa30.68■■■□□ 2.5
CIRBP-229ENST00000590704 PTPRUQ92729 1446 aa30.68■■■□□ 2.5
CIRBP-229ENST00000590704 MYOM2P54296 1465 aa30.68■■■□□ 2.5
CIRBP-229ENST00000590704 BCANQ96GW7 911 aa30.68■■■□□ 2.5
CIRBP-229ENST00000590704 PIK3C2GO75747 1445 aa30.67■■■□□ 2.5
CIRBP-229ENST00000590704 NEUROD1Q13562 356 aa30.66■■■□□ 2.5
CIRBP-229ENST00000590704 DCAF11Q8TEB1 546 aa30.66■■■□□ 2.5
CIRBP-229ENST00000590704 DIP2AQ14689 1571 aa30.66■■■□□ 2.5
CIRBP-229ENST00000590704 ALKQ9UM73 1620 aa30.66■■■□□ 2.5
CIRBP-229ENST00000590704 KCNA6P17658 529 aa30.65■■■□□ 2.5
CIRBP-229ENST00000590704 CHD2O14647 1828 aaKnown RBP30.65■■■□□ 2.5
CIRBP-229ENST00000590704 L3MBTL2Q969R5 705 aa30.63■■■□□ 2.49
CIRBP-229ENST00000590704 KDM2AQ9Y2K7 1162 aa30.63■■■□□ 2.49
CIRBP-229ENST00000590704 NWD1Q149M9 1564 aa30.61■■■□□ 2.49
CIRBP-229ENST00000590704 PIK3R4Q99570 1358 aa30.61■■■□□ 2.49
CIRBP-229ENST00000590704 CERKQ8TCT0 537 aa30.61■■■□□ 2.49
CIRBP-229ENST00000590704 C14orf93Q9H972 538 aaKnown RBP30.6■■■□□ 2.49
CIRBP-229ENST00000590704 ASXL1Q8IXJ9 1541 aa30.58■■■□□ 2.49
CIRBP-229ENST00000590704 STAC3Q96MF2 364 aa30.57■■■□□ 2.48
CIRBP-229ENST00000590704 CPS1P31327 1500 aa30.57■■■□□ 2.48
CIRBP-229ENST00000590704 LRRC7Q96NW7 1537 aa30.57■■■□□ 2.48
CIRBP-229ENST00000590704 CFAP70Q5T0N1 1121 aa30.57■■■□□ 2.48
CIRBP-229ENST00000590704 AMOTL2Q9Y2J4 779 aa30.55■■■□□ 2.48
CIRBP-229ENST00000590704 CLSPNQ9HAW4 1339 aa30.53■■■□□ 2.48
CIRBP-229ENST00000590704 XIRP1Q702N8 1843 aaKnown RBP30.52■■■□□ 2.48
CIRBP-229ENST00000590704 XRN1Q8IZH2 1706 aaKnown RBP30.52■■■□□ 2.48
CIRBP-229ENST00000590704 TMEM132EQ6IEE7 984 aa30.51■■■□□ 2.48
CIRBP-229ENST00000590704 RBM33Q96EV2 1170 aaKnown RBP30.5■■■□□ 2.47
CIRBP-229ENST00000590704 PRAG1Q86YV5 1406 aa30.49■■■□□ 2.47
CIRBP-229ENST00000590704 NKTRP30414 1462 aaKnown RBP30.48■■■□□ 2.47
CIRBP-229ENST00000590704 ADGRB1O14514 1584 aa30.46■■■□□ 2.47
CIRBP-229ENST00000590704 TMEM94Q12767 1356 aa30.45■■■□□ 2.47
CIRBP-229ENST00000590704 NBPF8Q3BBV2 869 aa30.44■■■□□ 2.46
CIRBP-229ENST00000590704 IQSEC2Q5JU85 1478 aa30.44■■■□□ 2.46
CIRBP-229ENST00000590704 PROSER2Q86WR7 435 aaPredicted RBP30.44■■■□□ 2.46
CIRBP-229ENST00000590704 CCER1Q8TC90 406 aaPredicted RBP30.44■■■□□ 2.46
CIRBP-229ENST00000590704 ROBO2Q9HCK4 1378 aa30.43■■■□□ 2.46
CIRBP-229ENST00000590704 LRPPRCP42704 1394 aaKnown RBP30.42■■■□□ 2.46
CIRBP-229ENST00000590704 ABCC11Q96J66 1382 aa30.41■■■□□ 2.46
CIRBP-229ENST00000590704 NBPF1Q3BBV0 1214 aa30.41■■■□□ 2.46
CIRBP-229ENST00000590704 LAMC1P11047 1609 aa30.4■■■□□ 2.46
CIRBP-229ENST00000590704 TECPR2O15040 1411 aa30.4■■■□□ 2.46
CIRBP-229ENST00000590704 YTHDC2Q9H6S0 1430 aaKnown RBP30.4■■■□□ 2.46
CIRBP-229ENST00000590704 TONSLQ96HA7 1378 aa30.37■■■□□ 2.45
CIRBP-229ENST00000590704 PTCH1Q13635 1447 aa30.36■■■□□ 2.45
CIRBP-229ENST00000590704 STK26Q9P289 416 aa30.36■■■□□ 2.45
CIRBP-229ENST00000590704 KIAA1210Q9ULL0 1709 aa30.35■■■□□ 2.45
CIRBP-229ENST00000590704 NCOA3Q9Y6Q9 1424 aa30.35■■■□□ 2.45
CIRBP-229ENST00000590704 KNDC1Q76NI1 1749 aa30.32■■■□□ 2.44
CIRBP-229ENST00000590704 WAPLQ7Z5K2 1190 aa30.31■■■□□ 2.44
CIRBP-229ENST00000590704 SIRT1Q96EB6 747 aa30.31■■■□□ 2.44
CIRBP-229ENST00000590704 PLEKHH1Q9ULM0 1364 aa30.31■■■□□ 2.44
CIRBP-229ENST00000590704 TRPM1Q7Z4N2 1603 aa30.3■■■□□ 2.44
CIRBP-229ENST00000590704 TIMELESSQ9UNS1 1208 aa30.29■■■□□ 2.44
CIRBP-229ENST00000590704 FAM135BQ49AJ0 1406 aa30.26■■■□□ 2.43
CIRBP-229ENST00000590704 TRAK1Q9UPV9 953 aa30.25■■■□□ 2.43
CIRBP-229ENST00000590704 DLC1Q96QB1 1528 aa30.25■■■□□ 2.43
CIRBP-229ENST00000590704 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.25■■■□□ 2.43
CIRBP-229ENST00000590704 C19orf44Q9H6X5 657 aa30.24■■■□□ 2.43
CIRBP-229ENST00000590704 NALCNQ8IZF0 1738 aa30.22■■■□□ 2.43
CIRBP-229ENST00000590704 GPRASP1Q5JY77 1395 aa30.22■■■□□ 2.43
CIRBP-229ENST00000590704 ADGRL3Q9HAR2 1447 aa30.22■■■□□ 2.43
CIRBP-229ENST00000590704 UBAP1LF5GYI3 381 aa30.21■■■□□ 2.43
CIRBP-229ENST00000590704 PRAM1Q96QH2 718 aa30.19■■■□□ 2.42
CIRBP-229ENST00000590704 MSH6P52701 1360 aa30.19■■■□□ 2.42
CIRBP-229ENST00000590704 RALGAPBQ86X10 1494 aa30.16■■■□□ 2.42
CIRBP-229ENST00000590704 ARHGEF28Q8N1W1 1705 aaKnown RBP30.16■■■□□ 2.42
CIRBP-229ENST00000590704 TOM1O60784 492 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms