RNA–Protein interactions for RNA: ENST00000589733.1

MBD1-219, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2

Gene MBD1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-219ENST00000589733 CPS1P31327 1500 aa22.62■■□□□ 1.21
MBD1-219ENST00000589733 PPP1R15AO75807 674 aaPredicted RBP22.61■■□□□ 1.21
MBD1-219ENST00000589733 HRCP23327 699 aa22.61■■□□□ 1.21
MBD1-219ENST00000589733 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.61■■□□□ 1.21
MBD1-219ENST00000589733 CERKQ8TCT0 537 aa22.6■■□□□ 1.21
MBD1-219ENST00000589733 IQSEC2Q5JU85 1478 aa22.6■■□□□ 1.21
MBD1-219ENST00000589733 CCDC144AA2RUR9 1427 aa22.59■■□□□ 1.21
MBD1-219ENST00000589733 PLEKHG1Q9ULL1 1385 aa22.58■■□□□ 1.21
MBD1-219ENST00000589733 FOXD1Q16676 465 aa22.57■■□□□ 1.2
MBD1-219ENST00000589733 DIP2AQ14689 1571 aa22.57■■□□□ 1.2
MBD1-219ENST00000589733 ZNF326Q5BKZ1 582 aaKnown RBP22.56■■□□□ 1.2
MBD1-219ENST00000589733 NEXMIFQ5QGS0 1516 aa22.56■■□□□ 1.2
MBD1-219ENST00000589733 STRCP1A6NGW2 1772 aa22.55■■□□□ 1.2
MBD1-219ENST00000589733 PPLO60437 1756 aa22.54■■□□□ 1.2
MBD1-219ENST00000589733 BCANQ96GW7 911 aa22.54■■□□□ 1.2
MBD1-219ENST00000589733 NWD1Q149M9 1564 aa22.5■■□□□ 1.19
MBD1-219ENST00000589733 SETBP1Q9Y6X0 1596 aa22.5■■□□□ 1.19
MBD1-219ENST00000589733 IFT172Q9UG01 1749 aa22.49■■□□□ 1.19
MBD1-219ENST00000589733 FBXO41Q8TF61 875 aa22.49■■□□□ 1.19
MBD1-219ENST00000589733 NUTM2DQ5VT03 806 aaPredicted RBP22.48■■□□□ 1.19
MBD1-219ENST00000589733 NRXN3Q9Y4C0 1643 aa22.48■■□□□ 1.19
MBD1-219ENST00000589733 CHD2O14647 1828 aaKnown RBP22.47■■□□□ 1.19
MBD1-219ENST00000589733 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
MBD1-219ENST00000589733 SLC26A8Q96RN1 970 aa22.47■■□□□ 1.19
MBD1-219ENST00000589733 RPGRIP1LQ68CZ1 1315 aa22.46■■□□□ 1.19
MBD1-219ENST00000589733 NKTRP30414 1462 aaKnown RBP22.45■■□□□ 1.18
MBD1-219ENST00000589733 SPATA31E1Q6ZUB1 1445 aa22.44■■□□□ 1.18
MBD1-219ENST00000589733 ADAMTS13Q76LX8 1427 aa22.44■■□□□ 1.18
MBD1-219ENST00000589733 LRRC7Q96NW7 1537 aa22.43■■□□□ 1.18
MBD1-219ENST00000589733 SENP3Q9H4L4 574 aaPredicted RBP22.43■■□□□ 1.18
MBD1-219ENST00000589733 TBX22Q9Y458 520 aa22.42■■□□□ 1.18
MBD1-219ENST00000589733 PIK3R4Q99570 1358 aa22.41■■□□□ 1.18
MBD1-219ENST00000589733 ANKRD30BQ9BXX2 1392 aa22.41■■□□□ 1.18
MBD1-219ENST00000589733 XIRP1Q702N8 1843 aaKnown RBP22.41■■□□□ 1.18
MBD1-219ENST00000589733 VGFO15240 615 aaPredicted RBP22.41■■□□□ 1.18
MBD1-219ENST00000589733 ILDR1Q86SU0 546 aaPredicted RBP22.41■■□□□ 1.18
MBD1-219ENST00000589733 KCNA6P17658 529 aa22.4■■□□□ 1.18
MBD1-219ENST00000589733 SETD1AO15047 1707 aaKnown RBP22.38■■□□□ 1.17
MBD1-219ENST00000589733 RGL3Q3MIN7 710 aa22.36■■□□□ 1.17
MBD1-219ENST00000589733 XRN1Q8IZH2 1706 aaKnown RBP22.36■■□□□ 1.17
MBD1-219ENST00000589733 ALKQ9UM73 1620 aa22.34■■□□□ 1.17
MBD1-219ENST00000589733 LAMC1P11047 1609 aa22.33■■□□□ 1.17
MBD1-219ENST00000589733 MYOM2P54296 1465 aa22.33■■□□□ 1.16
MBD1-219ENST00000589733 UBAP1LF5GYI3 381 aa22.32■■□□□ 1.16
MBD1-219ENST00000589733 TMEM94Q12767 1356 aa22.3■■□□□ 1.16
MBD1-219ENST00000589733 TOM1O60784 492 aa22.3■■□□□ 1.16
MBD1-219ENST00000589733 PROSER2Q86WR7 435 aaPredicted RBP22.3■■□□□ 1.16
MBD1-219ENST00000589733 PIK3C2GO75747 1445 aa22.28■■□□□ 1.16
MBD1-219ENST00000589733 PTPRUQ92729 1446 aa22.28■■□□□ 1.16
MBD1-219ENST00000589733 METP08581 1390 aa22.27■■□□□ 1.16
MBD1-219ENST00000589733 NCOA3Q9Y6Q9 1424 aa22.26■■□□□ 1.15
MBD1-219ENST00000589733 AMOTL2Q9Y2J4 779 aa22.26■■□□□ 1.15
MBD1-219ENST00000589733 NRXN1Q9ULB1 1477 aa22.26■■□□□ 1.15
MBD1-219ENST00000589733 ADGRF5Q8IZF2 1346 aa22.26■■□□□ 1.15
MBD1-219ENST00000589733 MSH6P52701 1360 aa22.24■■□□□ 1.15
MBD1-219ENST00000589733 KNDC1Q76NI1 1749 aa22.23■■□□□ 1.15
MBD1-219ENST00000589733 DHX57Q6P158 1386 aaKnown RBP22.23■■□□□ 1.15
MBD1-219ENST00000589733 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
MBD1-219ENST00000589733 PRAG1Q86YV5 1406 aa22.22■■□□□ 1.15
MBD1-219ENST00000589733 SCAF1Q9H7N4 1312 aaKnown RBP22.21■■□□□ 1.15
MBD1-219ENST00000589733 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.2■■□□□ 1.14
MBD1-219ENST00000589733 C14orf37Q86TY3 774 aa22.2■■□□□ 1.14
MBD1-219ENST00000589733 STAC3Q96MF2 364 aa22.2■■□□□ 1.14
MBD1-219ENST00000589733 NALCNQ8IZF0 1738 aa22.18■■□□□ 1.14
MBD1-219ENST00000589733 ASXL1Q8IXJ9 1541 aa22.18■■□□□ 1.14
MBD1-219ENST00000589733 PIP4K2BP78356 416 aa22.18■■□□□ 1.14
MBD1-219ENST00000589733 RBM33Q96EV2 1170 aaKnown RBP22.18■■□□□ 1.14
MBD1-219ENST00000589733 DCAF11Q8TEB1 546 aa22.17■■□□□ 1.14
MBD1-219ENST00000589733 DCCP43146 1447 aa22.14■■□□□ 1.14
MBD1-219ENST00000589733 KIAA1210Q9ULL0 1709 aa22.14■■□□□ 1.13
MBD1-219ENST00000589733 LRPPRCP42704 1394 aaKnown RBP22.13■■□□□ 1.13
MBD1-219ENST00000589733 KDM2AQ9Y2K7 1162 aa22.13■■□□□ 1.13
MBD1-219ENST00000589733 TECPR2O15040 1411 aa22.13■■□□□ 1.13
MBD1-219ENST00000589733 ADGRL3Q9HAR2 1447 aa22.13■■□□□ 1.13
MBD1-219ENST00000589733 ROBO1Q9Y6N7 1651 aa22.12■■□□□ 1.13
MBD1-219ENST00000589733 C14orf93Q9H972 538 aaKnown RBP22.12■■□□□ 1.13
MBD1-219ENST00000589733 YTHDC2Q9H6S0 1430 aaKnown RBP22.12■■□□□ 1.13
MBD1-219ENST00000589733 C19orf44Q9H6X5 657 aa22.11■■□□□ 1.13
MBD1-219ENST00000589733 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
MBD1-219ENST00000589733 CADPS2Q86UW7 1296 aa22.1■■□□□ 1.13
MBD1-219ENST00000589733 ATF3P18847 181 aa22.09■■□□□ 1.13
MBD1-219ENST00000589733 CFAP70Q5T0N1 1121 aa22.09■■□□□ 1.13
MBD1-219ENST00000589733 ADGRB1O14514 1584 aa22.08■■□□□ 1.13
MBD1-219ENST00000589733 ABCC11Q96J66 1382 aa22.08■■□□□ 1.12
MBD1-219ENST00000589733 FAM135BQ49AJ0 1406 aa22.07■■□□□ 1.12
MBD1-219ENST00000589733 TMEM132EQ6IEE7 984 aa22.07■■□□□ 1.12
MBD1-219ENST00000589733 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
MBD1-219ENST00000589733 STK26Q9P289 416 aa22.06■■□□□ 1.12
MBD1-219ENST00000589733 DLC1Q96QB1 1528 aa22.06■■□□□ 1.12
MBD1-219ENST00000589733 CDC42BPGQ6DT37 1551 aa22.05■■□□□ 1.12
MBD1-219ENST00000589733 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
MBD1-219ENST00000589733 SIN3AQ96ST3 1273 aa22.05■■□□□ 1.12
MBD1-219ENST00000589733 SLAIN2Q9P270 581 aa22.04■■□□□ 1.12
MBD1-219ENST00000589733 PHLPP1O60346 1717 aa22.02■■□□□ 1.12
MBD1-219ENST00000589733 ARHGEF28Q8N1W1 1705 aaKnown RBP22.01■■□□□ 1.11
MBD1-219ENST00000589733 HSPA1LP34931 641 aa22.01■■□□□ 1.11
MBD1-219ENST00000589733 MST1RQ04912 1400 aa22■■□□□ 1.11
MBD1-219ENST00000589733 L3MBTL2Q969R5 705 aa21.99■■□□□ 1.11
MBD1-219ENST00000589733 SIRT1Q96EB6 747 aa21.99■■□□□ 1.11
MBD1-219ENST00000589733 TONSLQ96HA7 1378 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms