RNA–Protein interactions for RNA: ENST00000589710.5

CIRBP-225, Transcript of cold inducible RNA binding protein, human

TSL 2 BASIC

Gene CIRBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-225	ENST00000589710	IFT172	Q9UG01	1749 aa		28.3	■■■□□ 2.12
CIRBP-225	ENST00000589710	RIMS1	Q86UR5	1692 aa	Known RBP	28.3	■■■□□ 2.12
CIRBP-225	ENST00000589710	MYOM2	P54296	1465 aa		28.29	■■■□□ 2.12
CIRBP-225	ENST00000589710	CENPB	P07199	599 aa	Predicted RBP	28.28	■■■□□ 2.12
CIRBP-225	ENST00000589710	PIK3C2B	O00750	1634 aa		28.28	■■■□□ 2.12
CIRBP-225	ENST00000589710	C3	P01024	1663 aa		28.27	■■■□□ 2.12
CIRBP-225	ENST00000589710	ERVK-7	P63135	1459 aa		28.26	■■■□□ 2.11
CIRBP-225	ENST00000589710	FBXO31	Q5XUX0	539 aa	Predicted RBP	28.24	■■■□□ 2.11
CIRBP-225	ENST00000589710	SPATA31D1	Q6ZQQ2	1576 aa		28.24	■■■□□ 2.11
CIRBP-225	ENST00000589710	ADGRF5	Q8IZF2	1346 aa		28.24	■■■□□ 2.11
CIRBP-225	ENST00000589710	KIAA1210	Q9ULL0	1709 aa		28.21	■■■□□ 2.11
CIRBP-225	ENST00000589710	PPL	O60437	1756 aa		28.21	■■■□□ 2.11
CIRBP-225	ENST00000589710	IQGAP1	P46940	1657 aa		28.19	■■■□□ 2.1
CIRBP-225	ENST00000589710	CEBPA	P49715	358 aa	Predicted RBP	28.18	■■■□□ 2.1
CIRBP-225	ENST00000589710	IDI1	Q13907	227 aa		28.17	■■■□□ 2.1
CIRBP-225	ENST00000589710	SLC52A1	Q9NWF4	448 aa		28.17	■■■□□ 2.1
CIRBP-225	ENST00000589710	NRXN1	Q9ULB1	1477 aa		28.17	■■■□□ 2.1
CIRBP-225	ENST00000589710	CFAP70	Q5T0N1	1121 aa		28.15	■■■□□ 2.1
CIRBP-225	ENST00000589710	RPGRIP1L	Q68CZ1	1315 aa		28.15	■■■□□ 2.1
CIRBP-225	ENST00000589710	SCAF11	Q99590	1463 aa	Known RBP	28.15	■■■□□ 2.1
CIRBP-225	ENST00000589710	CCER2	I3L3R5	266 aa		28.15	■■■□□ 2.1
CIRBP-225	ENST00000589710	PLPPR3	Q6T4P5	718 aa		28.13	■■■□□ 2.09
CIRBP-225	ENST00000589710	MYO5B	Q9ULV0	1848 aa		28.11	■■■□□ 2.09
CIRBP-225	ENST00000589710	TESK2	Q96S53	571 aa		28.11	■■■□□ 2.09
CIRBP-225	ENST00000589710	NEXMIF	Q5QGS0	1516 aa		28.1	■■■□□ 2.09
CIRBP-225	ENST00000589710	PTPRM	P28827	1452 aa		28.1	■■■□□ 2.09
CIRBP-225	ENST00000589710	NUTM2D	Q5VT03	806 aa	Predicted RBP	28.1	■■■□□ 2.09
CIRBP-225	ENST00000589710	PIK3C2G	O75747	1445 aa		28.1	■■■□□ 2.09
CIRBP-225	ENST00000589710	TNR	Q92752	1358 aa		28.1	■■■□□ 2.09
CIRBP-225	ENST00000589710	EIF3A	Q14152	1382 aa	Known RBP	28.09	■■■□□ 2.09
CIRBP-225	ENST00000589710	DISP3	Q9P2K9	1392 aa		28.08	■■■□□ 2.09
CIRBP-225	ENST00000589710	TMEM131L	A2VDJ0	1609 aa		28.08	■■■□□ 2.09
CIRBP-225	ENST00000589710	TMF1	P82094	1093 aa		28.07	■■■□□ 2.08
CIRBP-225	ENST00000589710	KDM4F	A0A1W2PPD8	638 aa		28.04	■■■□□ 2.08
CIRBP-225	ENST00000589710	STAG3	Q9UJ98	1225 aa		28.04	■■■□□ 2.08
CIRBP-225	ENST00000589710	VGF	O15240	615 aa	Predicted RBP	28.04	■■■□□ 2.08
CIRBP-225	ENST00000589710	MYO3A	Q8NEV4	1616 aa		28.03	■■■□□ 2.08
CIRBP-225	ENST00000589710	SETBP1	Q9Y6X0	1596 aa		28.02	■■■□□ 2.08
CIRBP-225	ENST00000589710	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.02	■■■□□ 2.08
CIRBP-225	ENST00000589710	CNGB1	Q14028	1251 aa	Predicted RBP	28.01	■■■□□ 2.07
CIRBP-225	ENST00000589710	C14orf93	Q9H972	538 aa	Known RBP	28	■■■□□ 2.07
CIRBP-225	ENST00000589710	NLRP1	Q9C000	1473 aa		27.99	■■■□□ 2.07
CIRBP-225	ENST00000589710	SENP3	Q9H4L4	574 aa	Predicted RBP	27.96	■■■□□ 2.07
CIRBP-225	ENST00000589710	ADGRB1	O14514	1584 aa		27.95	■■■□□ 2.06
CIRBP-225	ENST00000589710	UBR1	Q8IWV7	1749 aa		27.95	■■■□□ 2.06
CIRBP-225	ENST00000589710	ZFYVE9	O95405	1425 aa		27.94	■■■□□ 2.06
CIRBP-225	ENST00000589710	TMEM132E	Q6IEE7	984 aa		27.94	■■■□□ 2.06
CIRBP-225	ENST00000589710	A2ML1	A8K2U0	1454 aa		27.94	■■■□□ 2.06
CIRBP-225	ENST00000589710	KDM5A	P29375	1690 aa	Known RBP	27.94	■■■□□ 2.06
CIRBP-225	ENST00000589710	TRAK1	Q9UPV9	953 aa		27.92	■■■□□ 2.06
CIRBP-225	ENST00000589710	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	27.91	■■■□□ 2.06
CIRBP-225	ENST00000589710	ZNF142	P52746	1687 aa	Predicted RBP	27.9	■■■□□ 2.06
CIRBP-225	ENST00000589710	CDCA8	Q53HL2	280 aa		27.9	■■■□□ 2.06
CIRBP-225	ENST00000589710	SETD1B	Q9UPS6	1966 aa	Known RBP	27.88	■■■□□ 2.05
CIRBP-225	ENST00000589710	CENPJ	Q9HC77	1338 aa	Predicted RBP	27.87	■■■□□ 2.05
CIRBP-225	ENST00000589710	RIMS2	Q9UQ26	1411 aa		27.85	■■■□□ 2.05
CIRBP-225	ENST00000589710	CCDC184	Q52MB2	194 aa		27.85	■■■□□ 2.05
CIRBP-225	ENST00000589710	MRS2	Q9HD23	443 aa		27.85	■■■□□ 2.05
CIRBP-225	ENST00000589710	QRICH2	Q9H0J4	1663 aa		27.84	■■■□□ 2.05
CIRBP-225	ENST00000589710	SLC24A1	O60721	1099 aa		27.83	■■■□□ 2.05
CIRBP-225	ENST00000589710	PANK3	Q9H999	370 aa		27.83	■■■□□ 2.05
CIRBP-225	ENST00000589710	ASXL1	Q8IXJ9	1541 aa		27.8	■■■□□ 2.04
CIRBP-225	ENST00000589710	ARHGEF28	Q8N1W1	1705 aa	Known RBP	27.8	■■■□□ 2.04
CIRBP-225	ENST00000589710	SBNO2	Q9Y2G9	1366 aa		27.8	■■■□□ 2.04
CIRBP-225	ENST00000589710	MYOM1	P52179	1685 aa		27.78	■■■□□ 2.04
CIRBP-225	ENST00000589710	ALK	Q9UM73	1620 aa		27.78	■■■□□ 2.04
CIRBP-225	ENST00000589710	TMEM2	Q9UHN6	1383 aa		27.78	■■■□□ 2.04
CIRBP-225	ENST00000589710	KTN1	Q86UP2	1357 aa	Known RBP	27.77	■■■□□ 2.04
CIRBP-225	ENST00000589710	STK26	Q9P289	416 aa		27.77	■■■□□ 2.04
CIRBP-225	ENST00000589710	PER1	O15534	1290 aa	Predicted RBP	27.76	■■■□□ 2.03
CIRBP-225	ENST00000589710	SLIT1	O75093	1534 aa		27.76	■■■□□ 2.03
CIRBP-225	ENST00000589710	SCAF1	Q9H7N4	1312 aa	Known RBP	27.75	■■■□□ 2.03
CIRBP-225	ENST00000589710	ARHGAP23	Q9P227	1491 aa		27.74	■■■□□ 2.03
CIRBP-225	ENST00000589710	RALBP1	Q15311	655 aa		27.74	■■■□□ 2.03
CIRBP-225	ENST00000589710	FAM9B	Q8IZU0	186 aa		27.73	■■■□□ 2.03
CIRBP-225	ENST00000589710	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	27.73	■■■□□ 2.03
CIRBP-225	ENST00000589710	THEMIS	Q8N1K5	641 aa	Predicted RBP	27.72	■■■□□ 2.03
CIRBP-225	ENST00000589710	YTHDC2	Q9H6S0	1430 aa	Known RBP	27.71	■■■□□ 2.03
CIRBP-225	ENST00000589710	CC2D1B	Q5T0F9	858 aa	Known RBP	27.71	■■■□□ 2.03
CIRBP-225	ENST00000589710	MYBBP1A	Q9BQG0	1328 aa	Known RBP	27.7	■■■□□ 2.03
CIRBP-225	ENST00000589710	SAFB2	Q14151	953 aa	Known RBP eCLIP	27.7	■■■□□ 2.02
CIRBP-225	ENST00000589710	PARD3	Q8TEW0	1356 aa		27.68	■■■□□ 2.02
CIRBP-225	ENST00000589710	KNSTRN	Q9Y448	316 aa		27.68	■■■□□ 2.02
CIRBP-225	ENST00000589710	GTF3C3	Q9Y5Q9	886 aa		27.68	■■■□□ 2.02
CIRBP-225	ENST00000589710	HDGF	P51858	240 aa	Known RBP	27.67	■■■□□ 2.02
CIRBP-225	ENST00000589710	HNRNPU	Q00839	825 aa	Known RBP eCLIP	27.67	■■■□□ 2.02
CIRBP-225	ENST00000589710	LMTK3	Q96Q04	1460 aa		27.66	■■■□□ 2.02
CIRBP-225	ENST00000589710	LTK	P29376	864 aa		27.66	■■■□□ 2.02
CIRBP-225	ENST00000589710	SETD1A	O15047	1707 aa	Known RBP	27.65	■■■□□ 2.02
CIRBP-225	ENST00000589710	TMC1	Q8TDI8	760 aa		27.64	■■■□□ 2.02
CIRBP-225	ENST00000589710	NRXN3	Q9Y4C0	1643 aa		27.64	■■■□□ 2.02
CIRBP-225	ENST00000589710	BCAN	Q96GW7	911 aa		27.64	■■■□□ 2.01
CIRBP-225	ENST00000589710	EVC2	Q86UK5	1308 aa		27.64	■■■□□ 2.01
CIRBP-225	ENST00000589710	POGK	Q9P215	609 aa		27.63	■■■□□ 2.01
CIRBP-225	ENST00000589710	TULP4	Q9NRJ4	1543 aa		27.63	■■■□□ 2.01
CIRBP-225	ENST00000589710	TXNDC2	Q86VQ3	553 aa		27.62	■■■□□ 2.01
CIRBP-225	ENST00000589710	PRAM1	Q96QH2	718 aa		27.62	■■■□□ 2.01
CIRBP-225	ENST00000589710	BRD4	O60885	1362 aa	Predicted RBP	27.61	■■■□□ 2.01
CIRBP-225	ENST00000589710	EID1	Q9Y6B2	187 aa		27.61	■■■□□ 2.01
CIRBP-225	ENST00000589710	PLEKHG1	Q9ULL1	1385 aa		27.58	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 13 ms