RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 MED14O60244 1454 aa31.04■■■□□ 2.56
R3HDM4-204ENST00000589428 ZNF326Q5BKZ1 582 aaKnown RBP31.04■■■□□ 2.56
R3HDM4-204ENST00000589428 NPHP4O75161 1426 aaPredicted RBP31.03■■■□□ 2.56
R3HDM4-204ENST00000589428 ZFYVE9O95405 1425 aa31.03■■■□□ 2.56
R3HDM4-204ENST00000589428 CLSPNQ9HAW4 1339 aa31.02■■■□□ 2.56
R3HDM4-204ENST00000589428 LTKP29376 864 aa31.02■■■□□ 2.56
R3HDM4-204ENST00000589428 HDGFP51858 240 aaKnown RBP31.02■■■□□ 2.56
R3HDM4-204ENST00000589428 IQGAP1P46940 1657 aa31.01■■■□□ 2.55
R3HDM4-204ENST00000589428 PPP1R15AO75807 674 aaPredicted RBP30.99■■■□□ 2.55
R3HDM4-204ENST00000589428 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.99■■■□□ 2.55
R3HDM4-204ENST00000589428 SPATA31E1Q6ZUB1 1445 aa30.94■■■□□ 2.54
R3HDM4-204ENST00000589428 NEXMIFQ5QGS0 1516 aa30.94■■■□□ 2.54
R3HDM4-204ENST00000589428 NUTM2DQ5VT03 806 aaPredicted RBP30.92■■■□□ 2.54
R3HDM4-204ENST00000589428 PLEKHG1Q9ULL1 1385 aa30.9■■■□□ 2.54
R3HDM4-204ENST00000589428 RPGRIP1LQ68CZ1 1315 aa30.9■■■□□ 2.54
R3HDM4-204ENST00000589428 BCANQ96GW7 911 aa30.9■■■□□ 2.54
R3HDM4-204ENST00000589428 RGL3Q3MIN7 710 aa30.89■■■□□ 2.54
R3HDM4-204ENST00000589428 PPLO60437 1756 aa30.85■■■□□ 2.53
R3HDM4-204ENST00000589428 SENP3Q9H4L4 574 aaPredicted RBP30.83■■■□□ 2.53
R3HDM4-204ENST00000589428 VGFO15240 615 aaPredicted RBP30.82■■■□□ 2.52
R3HDM4-204ENST00000589428 SIN3AQ96ST3 1273 aa30.81■■■□□ 2.52
R3HDM4-204ENST00000589428 IFT172Q9UG01 1749 aa30.81■■■□□ 2.52
R3HDM4-204ENST00000589428 SLC26A8Q96RN1 970 aa30.79■■■□□ 2.52
R3HDM4-204ENST00000589428 ZNF335Q9H4Z2 1342 aaPredicted RBP30.79■■■□□ 2.52
R3HDM4-204ENST00000589428 DIP2AQ14689 1571 aa30.78■■■□□ 2.52
R3HDM4-204ENST00000589428 SETBP1Q9Y6X0 1596 aa30.78■■■□□ 2.52
R3HDM4-204ENST00000589428 ZEB1P37275 1124 aaPredicted RBP30.76■■■□□ 2.52
R3HDM4-204ENST00000589428 ADAMTS13Q76LX8 1427 aa30.75■■■□□ 2.51
R3HDM4-204ENST00000589428 NRXN3Q9Y4C0 1643 aa30.74■■■□□ 2.51
R3HDM4-204ENST00000589428 NEUROD1Q13562 356 aa30.73■■■□□ 2.51
R3HDM4-204ENST00000589428 LTBP4Q8N2S1 1624 aa30.72■■■□□ 2.51
R3HDM4-204ENST00000589428 TBX22Q9Y458 520 aa30.72■■■□□ 2.51
R3HDM4-204ENST00000589428 MYOM2P54296 1465 aa30.71■■■□□ 2.51
R3HDM4-204ENST00000589428 ADGRF5Q8IZF2 1346 aa30.69■■■□□ 2.5
R3HDM4-204ENST00000589428 CPS1P31327 1500 aa30.68■■■□□ 2.5
R3HDM4-204ENST00000589428 DCAF11Q8TEB1 546 aa30.65■■■□□ 2.5
R3HDM4-204ENST00000589428 PIK3R4Q99570 1358 aa30.65■■■□□ 2.5
R3HDM4-204ENST00000589428 PIK3C2GO75747 1445 aa30.65■■■□□ 2.5
R3HDM4-204ENST00000589428 STRCP1A6NGW2 1772 aa30.64■■■□□ 2.5
R3HDM4-204ENST00000589428 NRXN1Q9ULB1 1477 aa30.64■■■□□ 2.49
R3HDM4-204ENST00000589428 NWD1Q149M9 1564 aa30.64■■■□□ 2.49
R3HDM4-204ENST00000589428 ALKQ9UM73 1620 aa30.63■■■□□ 2.49
R3HDM4-204ENST00000589428 STAC3Q96MF2 364 aa30.63■■■□□ 2.49
R3HDM4-204ENST00000589428 KCNA6P17658 529 aa30.62■■■□□ 2.49
R3HDM4-204ENST00000589428 KDM2AQ9Y2K7 1162 aa30.61■■■□□ 2.49
R3HDM4-204ENST00000589428 CHD2O14647 1828 aaKnown RBP30.61■■■□□ 2.49
R3HDM4-204ENST00000589428 SETD1AO15047 1707 aaKnown RBP30.6■■■□□ 2.49
R3HDM4-204ENST00000589428 CERKQ8TCT0 537 aa30.59■■■□□ 2.49
R3HDM4-204ENST00000589428 NKTRP30414 1462 aaKnown RBP30.59■■■□□ 2.49
R3HDM4-204ENST00000589428 METP08581 1390 aa30.58■■■□□ 2.49
R3HDM4-204ENST00000589428 TONSLQ96HA7 1378 aa30.58■■■□□ 2.49
R3HDM4-204ENST00000589428 LAMC1P11047 1609 aa30.57■■■□□ 2.48
R3HDM4-204ENST00000589428 TIMELESSQ9UNS1 1208 aa30.56■■■□□ 2.48
R3HDM4-204ENST00000589428 IQSEC2Q5JU85 1478 aa30.53■■■□□ 2.48
R3HDM4-204ENST00000589428 PTPRUQ92729 1446 aa30.53■■■□□ 2.48
R3HDM4-204ENST00000589428 L3MBTL2Q969R5 705 aa30.53■■■□□ 2.48
R3HDM4-204ENST00000589428 LRRC7Q96NW7 1537 aa30.53■■■□□ 2.48
R3HDM4-204ENST00000589428 XRN1Q8IZH2 1706 aaKnown RBP30.52■■■□□ 2.48
R3HDM4-204ENST00000589428 AMOTL2Q9Y2J4 779 aa30.52■■■□□ 2.48
R3HDM4-204ENST00000589428 C14orf93Q9H972 538 aaKnown RBP30.5■■■□□ 2.47
R3HDM4-204ENST00000589428 CFAP70Q5T0N1 1121 aa30.48■■■□□ 2.47
R3HDM4-204ENST00000589428 PROSER2Q86WR7 435 aaPredicted RBP30.48■■■□□ 2.47
R3HDM4-204ENST00000589428 ASXL1Q8IXJ9 1541 aa30.47■■■□□ 2.47
R3HDM4-204ENST00000589428 PRAG1Q86YV5 1406 aa30.45■■■□□ 2.47
R3HDM4-204ENST00000589428 TMEM94Q12767 1356 aa30.45■■■□□ 2.47
R3HDM4-204ENST00000589428 TMEM132EQ6IEE7 984 aa30.42■■■□□ 2.46
R3HDM4-204ENST00000589428 PTCH1Q13635 1447 aa30.41■■■□□ 2.46
R3HDM4-204ENST00000589428 XIRP1Q702N8 1843 aaKnown RBP30.4■■■□□ 2.46
R3HDM4-204ENST00000589428 LRPPRCP42704 1394 aaKnown RBP30.4■■■□□ 2.46
R3HDM4-204ENST00000589428 KIAA1210Q9ULL0 1709 aa30.4■■■□□ 2.46
R3HDM4-204ENST00000589428 YTHDC2Q9H6S0 1430 aaKnown RBP30.39■■■□□ 2.46
R3HDM4-204ENST00000589428 RBM33Q96EV2 1170 aaKnown RBP30.39■■■□□ 2.45
R3HDM4-204ENST00000589428 STK26Q9P289 416 aa30.38■■■□□ 2.45
R3HDM4-204ENST00000589428 ADGRB1O14514 1584 aa30.38■■■□□ 2.45
R3HDM4-204ENST00000589428 KNDC1Q76NI1 1749 aa30.38■■■□□ 2.45
R3HDM4-204ENST00000589428 TECPR2O15040 1411 aa30.36■■■□□ 2.45
R3HDM4-204ENST00000589428 NCOA3Q9Y6Q9 1424 aa30.36■■■□□ 2.45
R3HDM4-204ENST00000589428 C14orf37Q86TY3 774 aa30.36■■■□□ 2.45
R3HDM4-204ENST00000589428 ABCC11Q96J66 1382 aa30.35■■■□□ 2.45
R3HDM4-204ENST00000589428 ROBO2Q9HCK4 1378 aa30.35■■■□□ 2.45
R3HDM4-204ENST00000589428 MSH6P52701 1360 aa30.33■■■□□ 2.45
R3HDM4-204ENST00000589428 UBAP1LF5GYI3 381 aa30.3■■■□□ 2.44
R3HDM4-204ENST00000589428 TRPM1Q7Z4N2 1603 aa30.3■■■□□ 2.44
R3HDM4-204ENST00000589428 FBXO41Q8TF61 875 aa30.27■■■□□ 2.44
R3HDM4-204ENST00000589428 DLC1Q96QB1 1528 aa30.27■■■□□ 2.44
R3HDM4-204ENST00000589428 TOM1O60784 492 aa30.27■■■□□ 2.44
R3HDM4-204ENST00000589428 FAM135BQ49AJ0 1406 aa30.26■■■□□ 2.44
R3HDM4-204ENST00000589428 ADGRL3Q9HAR2 1447 aa30.26■■■□□ 2.44
R3HDM4-204ENST00000589428 NBPF1Q3BBV0 1214 aa30.25■■■□□ 2.43
R3HDM4-204ENST00000589428 NBPF8Q3BBV2 869 aa30.25■■■□□ 2.43
R3HDM4-204ENST00000589428 C19orf44Q9H6X5 657 aa30.25■■■□□ 2.43
R3HDM4-204ENST00000589428 NALCNQ8IZF0 1738 aa30.24■■■□□ 2.43
R3HDM4-204ENST00000589428 TRAK1Q9UPV9 953 aa30.24■■■□□ 2.43
R3HDM4-204ENST00000589428 ROCK2O75116 1388 aaKnown RBP30.23■■■□□ 2.43
R3HDM4-204ENST00000589428 SIRT1Q96EB6 747 aa30.23■■■□□ 2.43
R3HDM4-204ENST00000589428 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.23■■■□□ 2.43
R3HDM4-204ENST00000589428 DCCP43146 1447 aa30.22■■■□□ 2.43
R3HDM4-204ENST00000589428 WAPLQ7Z5K2 1190 aa30.22■■■□□ 2.43
R3HDM4-204ENST00000589428 PLEKHH1Q9ULM0 1364 aa30.2■■■□□ 2.43
R3HDM4-204ENST00000589428 RALGAPBQ86X10 1494 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms