RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-208ENST00000589050 ANKLE2Q86XL3 938 aa22.44■■□□□ 1.18
RPRD1A-208ENST00000589050 EID1Q9Y6B2 187 aa22.44■■□□□ 1.18
RPRD1A-208ENST00000589050 ZFYVE9O95405 1425 aa22.43■■□□□ 1.18
RPRD1A-208ENST00000589050 RPGRIP1LQ68CZ1 1315 aa22.43■■□□□ 1.18
RPRD1A-208ENST00000589050 HDGFP51858 240 aaKnown RBP22.43■■□□□ 1.18
RPRD1A-208ENST00000589050 TXNDC2Q86VQ3 553 aa22.43■■□□□ 1.18
RPRD1A-208ENST00000589050 NUTM2DQ5VT03 806 aaPredicted RBP22.42■■□□□ 1.18
RPRD1A-208ENST00000589050 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.42■■□□□ 1.18
RPRD1A-208ENST00000589050 NCKAP5LQ9HCH0 1330 aa22.41■■□□□ 1.18
RPRD1A-208ENST00000589050 PPP1R15AO75807 674 aaPredicted RBP22.41■■□□□ 1.18
RPRD1A-208ENST00000589050 LTKP29376 864 aa22.41■■□□□ 1.18
RPRD1A-208ENST00000589050 NEXMIFQ5QGS0 1516 aa22.41■■□□□ 1.18
RPRD1A-208ENST00000589050 SCAF11Q99590 1463 aaKnown RBP22.41■■□□□ 1.18
RPRD1A-208ENST00000589050 VGFO15240 615 aaPredicted RBP22.36■■□□□ 1.17
RPRD1A-208ENST00000589050 TONSLQ96HA7 1378 aa22.36■■□□□ 1.17
RPRD1A-208ENST00000589050 DCAF11Q8TEB1 546 aa22.35■■□□□ 1.17
RPRD1A-208ENST00000589050 L3MBTL2Q969R5 705 aa22.34■■□□□ 1.17
RPRD1A-208ENST00000589050 PPLO60437 1756 aa22.34■■□□□ 1.17
RPRD1A-208ENST00000589050 POLR1AO95602 1720 aaPredicted RBP22.34■■□□□ 1.17
RPRD1A-208ENST00000589050 NPHP4O75161 1426 aaPredicted RBP22.33■■□□□ 1.17
RPRD1A-208ENST00000589050 BCANQ96GW7 911 aa22.33■■□□□ 1.17
RPRD1A-208ENST00000589050 KDM2AQ9Y2K7 1162 aa22.33■■□□□ 1.17
RPRD1A-208ENST00000589050 PLEKHG1Q9ULL1 1385 aa22.33■■□□□ 1.17
RPRD1A-208ENST00000589050 STRCQ7RTU9 1775 aa22.33■■□□□ 1.16
RPRD1A-208ENST00000589050 IFT172Q9UG01 1749 aa22.32■■□□□ 1.16
RPRD1A-208ENST00000589050 MED14O60244 1454 aa22.32■■□□□ 1.16
RPRD1A-208ENST00000589050 MYOM2P54296 1465 aa22.31■■□□□ 1.16
RPRD1A-208ENST00000589050 ADGRF5Q8IZF2 1346 aa22.31■■□□□ 1.16
RPRD1A-208ENST00000589050 STAC3Q96MF2 364 aa22.29■■□□□ 1.16
RPRD1A-208ENST00000589050 DMRT2Q9Y5R5 561 aa22.28■■□□□ 1.16
RPRD1A-208ENST00000589050 IQGAP1P46940 1657 aa22.27■■□□□ 1.16
RPRD1A-208ENST00000589050 TIMELESSQ9UNS1 1208 aa22.25■■□□□ 1.15
RPRD1A-208ENST00000589050 NRXN1Q9ULB1 1477 aa22.25■■□□□ 1.15
RPRD1A-208ENST00000589050 SETBP1Q9Y6X0 1596 aa22.25■■□□□ 1.15
RPRD1A-208ENST00000589050 PIK3C2GO75747 1445 aa22.24■■□□□ 1.15
RPRD1A-208ENST00000589050 SLC26A8Q96RN1 970 aa22.24■■□□□ 1.15
RPRD1A-208ENST00000589050 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
RPRD1A-208ENST00000589050 NRXN3Q9Y4C0 1643 aa22.21■■□□□ 1.15
RPRD1A-208ENST00000589050 TBX22Q9Y458 520 aa22.2■■□□□ 1.14
RPRD1A-208ENST00000589050 PRAG1Q86YV5 1406 aa22.2■■□□□ 1.14
RPRD1A-208ENST00000589050 DIP2AQ14689 1571 aa22.19■■□□□ 1.14
RPRD1A-208ENST00000589050 ALKQ9UM73 1620 aa22.18■■□□□ 1.14
RPRD1A-208ENST00000589050 CFAP70Q5T0N1 1121 aa22.17■■□□□ 1.14
RPRD1A-208ENST00000589050 C14orf93Q9H972 538 aaKnown RBP22.17■■□□□ 1.14
RPRD1A-208ENST00000589050 METP08581 1390 aa22.14■■□□□ 1.14
RPRD1A-208ENST00000589050 NBPF8Q3BBV2 869 aa22.14■■□□□ 1.13
RPRD1A-208ENST00000589050 LAMC1P11047 1609 aa22.13■■□□□ 1.13
RPRD1A-208ENST00000589050 SETD1AO15047 1707 aaKnown RBP22.11■■□□□ 1.13
RPRD1A-208ENST00000589050 PIK3R4Q99570 1358 aa22.11■■□□□ 1.13
RPRD1A-208ENST00000589050 ZNF335Q9H4Z2 1342 aaPredicted RBP22.1■■□□□ 1.13
RPRD1A-208ENST00000589050 TMEM132EQ6IEE7 984 aa22.1■■□□□ 1.13
RPRD1A-208ENST00000589050 ASXL1Q8IXJ9 1541 aa22.09■■□□□ 1.13
RPRD1A-208ENST00000589050 PTPRUQ92729 1446 aa22.08■■□□□ 1.13
RPRD1A-208ENST00000589050 KCNA6P17658 529 aa22.08■■□□□ 1.13
RPRD1A-208ENST00000589050 KIAA1210Q9ULL0 1709 aa22.07■■□□□ 1.12
RPRD1A-208ENST00000589050 NBPF1Q3BBV0 1214 aa22.07■■□□□ 1.12
RPRD1A-208ENST00000589050 AMOTL2Q9Y2J4 779 aa22.07■■□□□ 1.12
RPRD1A-208ENST00000589050 TRPM1Q7Z4N2 1603 aa22.06■■□□□ 1.12
RPRD1A-208ENST00000589050 ADGRB1O14514 1584 aa22.06■■□□□ 1.12
RPRD1A-208ENST00000589050 ROCK2O75116 1388 aaKnown RBP22.05■■□□□ 1.12
RPRD1A-208ENST00000589050 STK26Q9P289 416 aa22.05■■□□□ 1.12
RPRD1A-208ENST00000589050 YTHDC2Q9H6S0 1430 aaKnown RBP22.05■■□□□ 1.12
RPRD1A-208ENST00000589050 NWD1Q149M9 1564 aa22.04■■□□□ 1.12
RPRD1A-208ENST00000589050 RALGAPBQ86X10 1494 aa22.04■■□□□ 1.12
RPRD1A-208ENST00000589050 LRPPRCP42704 1394 aaKnown RBP22.04■■□□□ 1.12
RPRD1A-208ENST00000589050 CHD2O14647 1828 aaKnown RBP22.02■■□□□ 1.12
RPRD1A-208ENST00000589050 XRN1Q8IZH2 1706 aaKnown RBP22.01■■□□□ 1.11
RPRD1A-208ENST00000589050 ABCC11Q96J66 1382 aa22■■□□□ 1.11
RPRD1A-208ENST00000589050 NKTRP30414 1462 aaKnown RBP22■■□□□ 1.11
RPRD1A-208ENST00000589050 STRCP1A6NGW2 1772 aa21.99■■□□□ 1.11
RPRD1A-208ENST00000589050 TRAK1Q9UPV9 953 aa21.99■■□□□ 1.11
RPRD1A-208ENST00000589050 CPS1P31327 1500 aa21.99■■□□□ 1.11
RPRD1A-208ENST00000589050 GPRASP1Q5JY77 1395 aa21.99■■□□□ 1.11
RPRD1A-208ENST00000589050 LTBP4Q8N2S1 1624 aa21.98■■□□□ 1.11
RPRD1A-208ENST00000589050 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
RPRD1A-208ENST00000589050 CARD11Q9BXL7 1154 aa21.98■■□□□ 1.11
RPRD1A-208ENST00000589050 TECPR2O15040 1411 aa21.97■■□□□ 1.11
RPRD1A-208ENST00000589050 PTCH1Q13635 1447 aa21.97■■□□□ 1.11
RPRD1A-208ENST00000589050 ROBO2Q9HCK4 1378 aa21.97■■□□□ 1.11
RPRD1A-208ENST00000589050 ZEB1P37275 1124 aaPredicted RBP21.96■■□□□ 1.11
RPRD1A-208ENST00000589050 KNDC1Q76NI1 1749 aa21.94■■□□□ 1.1
RPRD1A-208ENST00000589050 RBM33Q96EV2 1170 aaKnown RBP21.94■■□□□ 1.1
RPRD1A-208ENST00000589050 LRRC7Q96NW7 1537 aa21.94■■□□□ 1.1
RPRD1A-208ENST00000589050 DLC1Q96QB1 1528 aa21.94■■□□□ 1.1
RPRD1A-208ENST00000589050 SIRT1Q96EB6 747 aa21.93■■□□□ 1.1
RPRD1A-208ENST00000589050 FAM135BQ49AJ0 1406 aa21.92■■□□□ 1.1
RPRD1A-208ENST00000589050 TMEM94Q12767 1356 aa21.92■■□□□ 1.1
RPRD1A-208ENST00000589050 WAPLQ7Z5K2 1190 aa21.92■■□□□ 1.1
RPRD1A-208ENST00000589050 PRAM1Q96QH2 718 aa21.92■■□□□ 1.1
RPRD1A-208ENST00000589050 PLEKHH1Q9ULM0 1364 aa21.91■■□□□ 1.1
RPRD1A-208ENST00000589050 POGKQ9P215 609 aa21.91■■□□□ 1.1
RPRD1A-208ENST00000589050 EIF3AQ14152 1382 aaKnown RBP21.89■■□□□ 1.1
RPRD1A-208ENST00000589050 SAFB2Q14151 953 aaKnown RBP eCLIP21.89■■□□□ 1.09
RPRD1A-208ENST00000589050 C14orf37Q86TY3 774 aa21.89■■□□□ 1.09
RPRD1A-208ENST00000589050 ARHGEF28Q8N1W1 1705 aaKnown RBP21.88■■□□□ 1.09
RPRD1A-208ENST00000589050 NCOA3Q9Y6Q9 1424 aa21.87■■□□□ 1.09
RPRD1A-208ENST00000589050 USP47Q96K76 1375 aa21.86■■□□□ 1.09
RPRD1A-208ENST00000589050 CENPJQ9HC77 1338 aaPredicted RBP21.85■■□□□ 1.09
RPRD1A-208ENST00000589050 CERKQ8TCT0 537 aa21.84■■□□□ 1.09
RPRD1A-208ENST00000589050 ADGRL3Q9HAR2 1447 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms