RNA–Protein interactions for RNA: ENST00000589039.5

GCDH-209, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-209ENST00000589039 RIMS2Q9UQ26 1411 aa22.4■■□□□ 1.18
GCDH-209ENST00000589039 RPGRIP1LQ68CZ1 1315 aa22.4■■□□□ 1.18
GCDH-209ENST00000589039 ZNF326Q5BKZ1 582 aaKnown RBP22.4■■□□□ 1.18
GCDH-209ENST00000589039 RGL3Q3MIN7 710 aa22.39■■□□□ 1.17
GCDH-209ENST00000589039 HSPA2P54652 639 aa22.38■■□□□ 1.17
GCDH-209ENST00000589039 SCAF11Q99590 1463 aaKnown RBP22.36■■□□□ 1.17
GCDH-209ENST00000589039 HDGFP51858 240 aaKnown RBP22.36■■□□□ 1.17
GCDH-209ENST00000589039 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.35■■□□□ 1.17
GCDH-209ENST00000589039 ANKLE2Q86XL3 938 aa22.34■■□□□ 1.17
GCDH-209ENST00000589039 EID1Q9Y6B2 187 aa22.34■■□□□ 1.17
GCDH-209ENST00000589039 MYOM2P54296 1465 aa22.34■■□□□ 1.17
GCDH-209ENST00000589039 TONSLQ96HA7 1378 aa22.33■■□□□ 1.17
GCDH-209ENST00000589039 LTKP29376 864 aa22.32■■□□□ 1.16
GCDH-209ENST00000589039 TXNDC2Q86VQ3 553 aa22.32■■□□□ 1.16
GCDH-209ENST00000589039 IQGAP1P46940 1657 aa22.32■■□□□ 1.16
GCDH-209ENST00000589039 MED14O60244 1454 aa22.31■■□□□ 1.16
GCDH-209ENST00000589039 VGFO15240 615 aaPredicted RBP22.3■■□□□ 1.16
GCDH-209ENST00000589039 L3MBTL2Q969R5 705 aa22.3■■□□□ 1.16
GCDH-209ENST00000589039 STAC3Q96MF2 364 aa22.3■■□□□ 1.16
GCDH-209ENST00000589039 PPP1R15AO75807 674 aaPredicted RBP22.29■■□□□ 1.16
GCDH-209ENST00000589039 DCAF11Q8TEB1 546 aa22.29■■□□□ 1.16
GCDH-209ENST00000589039 TIMELESSQ9UNS1 1208 aa22.29■■□□□ 1.16
GCDH-209ENST00000589039 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
GCDH-209ENST00000589039 NRXN3Q9Y4C0 1643 aa22.28■■□□□ 1.16
GCDH-209ENST00000589039 PLEKHG1Q9ULL1 1385 aa22.28■■□□□ 1.16
GCDH-209ENST00000589039 NUTM2DQ5VT03 806 aaPredicted RBP22.28■■□□□ 1.16
GCDH-209ENST00000589039 NCKAP5LQ9HCH0 1330 aa22.28■■□□□ 1.16
GCDH-209ENST00000589039 ILDR1Q86SU0 546 aaPredicted RBP22.27■■□□□ 1.16
GCDH-209ENST00000589039 SETBP1Q9Y6X0 1596 aa22.27■■□□□ 1.16
GCDH-209ENST00000589039 NPHP4O75161 1426 aaPredicted RBP22.26■■□□□ 1.15
GCDH-209ENST00000589039 LAMC1P11047 1609 aa22.25■■□□□ 1.15
GCDH-209ENST00000589039 SETD1AO15047 1707 aaKnown RBP22.25■■□□□ 1.15
GCDH-209ENST00000589039 ADGRF5Q8IZF2 1346 aa22.25■■□□□ 1.15
GCDH-209ENST00000589039 KDM2AQ9Y2K7 1162 aa22.24■■□□□ 1.15
GCDH-209ENST00000589039 DIP2AQ14689 1571 aa22.24■■□□□ 1.15
GCDH-209ENST00000589039 PIK3C2GO75747 1445 aa22.23■■□□□ 1.15
GCDH-209ENST00000589039 KIAA1210Q9ULL0 1709 aa22.23■■□□□ 1.15
GCDH-209ENST00000589039 PRAG1Q86YV5 1406 aa22.21■■□□□ 1.15
GCDH-209ENST00000589039 ALKQ9UM73 1620 aa22.2■■□□□ 1.15
GCDH-209ENST00000589039 ADAMTS13Q76LX8 1427 aa22.2■■□□□ 1.14
GCDH-209ENST00000589039 TRPM1Q7Z4N2 1603 aa22.18■■□□□ 1.14
GCDH-209ENST00000589039 DMRT2Q9Y5R5 561 aa22.18■■□□□ 1.14
GCDH-209ENST00000589039 BCANQ96GW7 911 aa22.17■■□□□ 1.14
GCDH-209ENST00000589039 CHD2O14647 1828 aaKnown RBP22.16■■□□□ 1.14
GCDH-209ENST00000589039 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
GCDH-209ENST00000589039 TBX22Q9Y458 520 aa22.14■■□□□ 1.13
GCDH-209ENST00000589039 SLC26A8Q96RN1 970 aa22.13■■□□□ 1.13
GCDH-209ENST00000589039 C14orf93Q9H972 538 aaKnown RBP22.13■■□□□ 1.13
GCDH-209ENST00000589039 ASXL1Q8IXJ9 1541 aa22.11■■□□□ 1.13
GCDH-209ENST00000589039 NBPF8Q3BBV2 869 aa22.11■■□□□ 1.13
GCDH-209ENST00000589039 STRCP1A6NGW2 1772 aa22.1■■□□□ 1.13
GCDH-209ENST00000589039 CFAP70Q5T0N1 1121 aa22.1■■□□□ 1.13
GCDH-209ENST00000589039 PIK3R4Q99570 1358 aa22.1■■□□□ 1.13
GCDH-209ENST00000589039 ADGRB1O14514 1584 aa22.09■■□□□ 1.13
GCDH-209ENST00000589039 KNDC1Q76NI1 1749 aa22.09■■□□□ 1.13
GCDH-209ENST00000589039 NWD1Q149M9 1564 aa22.08■■□□□ 1.13
GCDH-209ENST00000589039 XRN1Q8IZH2 1706 aaKnown RBP22.08■■□□□ 1.12
GCDH-209ENST00000589039 RALGAPBQ86X10 1494 aa22.08■■□□□ 1.12
GCDH-209ENST00000589039 METP08581 1390 aa22.07■■□□□ 1.12
GCDH-209ENST00000589039 PTPRUQ92729 1446 aa22.03■■□□□ 1.12
GCDH-209ENST00000589039 ZEB1P37275 1124 aaPredicted RBP22.02■■□□□ 1.12
GCDH-209ENST00000589039 ROCK2O75116 1388 aaKnown RBP22.01■■□□□ 1.11
GCDH-209ENST00000589039 GPRASP1Q5JY77 1395 aa22.01■■□□□ 1.11
GCDH-209ENST00000589039 ARHGEF28Q8N1W1 1705 aaKnown RBP22.01■■□□□ 1.11
GCDH-209ENST00000589039 YTHDC2Q9H6S0 1430 aaKnown RBP22.01■■□□□ 1.11
GCDH-209ENST00000589039 NBPF1Q3BBV0 1214 aa22.01■■□□□ 1.11
GCDH-209ENST00000589039 TMEM132EQ6IEE7 984 aa22.01■■□□□ 1.11
GCDH-209ENST00000589039 LRPPRCP42704 1394 aaKnown RBP22■■□□□ 1.11
GCDH-209ENST00000589039 KCNA6P17658 529 aa22■■□□□ 1.11
GCDH-209ENST00000589039 CPS1P31327 1500 aa22■■□□□ 1.11
GCDH-209ENST00000589039 TECPR2O15040 1411 aa21.99■■□□□ 1.11
GCDH-209ENST00000589039 NKTRP30414 1462 aaKnown RBP21.99■■□□□ 1.11
GCDH-209ENST00000589039 DLC1Q96QB1 1528 aa21.98■■□□□ 1.11
GCDH-209ENST00000589039 LTBP4Q8N2S1 1624 aa21.98■■□□□ 1.11
GCDH-209ENST00000589039 ABCC11Q96J66 1382 aa21.98■■□□□ 1.11
GCDH-209ENST00000589039 XIRP1Q702N8 1843 aaKnown RBP21.97■■□□□ 1.11
GCDH-209ENST00000589039 AMOTL2Q9Y2J4 779 aa21.97■■□□□ 1.11
GCDH-209ENST00000589039 ZNF335Q9H4Z2 1342 aaPredicted RBP21.97■■□□□ 1.11
GCDH-209ENST00000589039 PTCH1Q13635 1447 aa21.96■■□□□ 1.11
GCDH-209ENST00000589039 CARD11Q9BXL7 1154 aa21.93■■□□□ 1.1
GCDH-209ENST00000589039 STK26Q9P289 416 aa21.93■■□□□ 1.1
GCDH-209ENST00000589039 FAM135BQ49AJ0 1406 aa21.91■■□□□ 1.1
GCDH-209ENST00000589039 SIRT1Q96EB6 747 aa21.91■■□□□ 1.1
GCDH-209ENST00000589039 ROBO2Q9HCK4 1378 aa21.9■■□□□ 1.1
GCDH-209ENST00000589039 TRAK1Q9UPV9 953 aa21.9■■□□□ 1.1
GCDH-209ENST00000589039 QRICH2Q9H0J4 1663 aa21.89■■□□□ 1.1
GCDH-209ENST00000589039 LRRC7Q96NW7 1537 aa21.89■■□□□ 1.09
GCDH-209ENST00000589039 NALCNQ8IZF0 1738 aa21.87■■□□□ 1.09
GCDH-209ENST00000589039 EIF3AQ14152 1382 aaKnown RBP21.87■■□□□ 1.09
GCDH-209ENST00000589039 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.86■■□□□ 1.09
GCDH-209ENST00000589039 PROSER2Q86WR7 435 aaPredicted RBP21.86■■□□□ 1.09
GCDH-209ENST00000589039 NCOA3Q9Y6Q9 1424 aa21.85■■□□□ 1.09
GCDH-209ENST00000589039 USP47Q96K76 1375 aa21.84■■□□□ 1.09
GCDH-209ENST00000589039 PLEKHH1Q9ULM0 1364 aa21.84■■□□□ 1.09
GCDH-209ENST00000589039 WAPLQ7Z5K2 1190 aa21.83■■□□□ 1.09
GCDH-209ENST00000589039 PRAM1Q96QH2 718 aa21.83■■□□□ 1.09
GCDH-209ENST00000589039 TMEM94Q12767 1356 aa21.83■■□□□ 1.08
GCDH-209ENST00000589039 POGKQ9P215 609 aa21.82■■□□□ 1.08
GCDH-209ENST00000589039 CENPJQ9HC77 1338 aaPredicted RBP21.81■■□□□ 1.08
GCDH-209ENST00000589039 ADGRB2O60241 1585 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms