RNA–Protein interactions for RNA: ENST00000587197.1

DNMT1-212, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-212ENST00000587197 CHGAP10645 457 aaKnown RBP25.52■■□□□ 1.68
DNMT1-212ENST00000587197 BCANQ96GW7 911 aa25.5■■□□□ 1.67
DNMT1-212ENST00000587197 PPP1R15AO75807 674 aaPredicted RBP25.49■■□□□ 1.67
DNMT1-212ENST00000587197 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.49■■□□□ 1.67
DNMT1-212ENST00000587197 TMEM131LA2VDJ0 1609 aa25.47■■□□□ 1.67
DNMT1-212ENST00000587197 RIMS2Q9UQ26 1411 aa25.46■■□□□ 1.67
DNMT1-212ENST00000587197 TRPM2O94759 1503 aa25.45■■□□□ 1.66
DNMT1-212ENST00000587197 LRRC7Q96NW7 1537 aa25.45■■□□□ 1.66
DNMT1-212ENST00000587197 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
DNMT1-212ENST00000587197 SLC26A8Q96RN1 970 aa25.44■■□□□ 1.66
DNMT1-212ENST00000587197 ZFYVE9O95405 1425 aa25.44■■□□□ 1.66
DNMT1-212ENST00000587197 STRCP1A6NGW2 1772 aa25.44■■□□□ 1.66
DNMT1-212ENST00000587197 SPHKAPQ2M3C7 1700 aa25.43■■□□□ 1.66
DNMT1-212ENST00000587197 FOXD1Q16676 465 aa25.43■■□□□ 1.66
DNMT1-212ENST00000587197 MYO5BQ9ULV0 1848 aa25.42■■□□□ 1.66
DNMT1-212ENST00000587197 PLEKHG1Q9ULL1 1385 aa25.42■■□□□ 1.66
DNMT1-212ENST00000587197 KCNA6P17658 529 aa25.41■■□□□ 1.66
DNMT1-212ENST00000587197 PIP4K2BP78356 416 aa25.41■■□□□ 1.66
DNMT1-212ENST00000587197 PCGF6Q9BYE7 350 aa25.38■■□□□ 1.65
DNMT1-212ENST00000587197 ANKRD30BQ9BXX2 1392 aa25.35■■□□□ 1.65
DNMT1-212ENST00000587197 PROSER2Q86WR7 435 aaPredicted RBP25.34■■□□□ 1.65
DNMT1-212ENST00000587197 TBX22Q9Y458 520 aa25.34■■□□□ 1.65
DNMT1-212ENST00000587197 CCDC144AA2RUR9 1427 aa25.34■■□□□ 1.65
DNMT1-212ENST00000587197 CLTCL1P53675 1640 aa25.34■■□□□ 1.65
DNMT1-212ENST00000587197 ZNF326Q5BKZ1 582 aaKnown RBP25.33■■□□□ 1.65
DNMT1-212ENST00000587197 SENP3Q9H4L4 574 aaPredicted RBP25.33■■□□□ 1.65
DNMT1-212ENST00000587197 NUTM2DQ5VT03 806 aaPredicted RBP25.32■■□□□ 1.64
DNMT1-212ENST00000587197 NKTRP30414 1462 aaKnown RBP25.3■■□□□ 1.64
DNMT1-212ENST00000587197 TMEM94Q12767 1356 aa25.3■■□□□ 1.64
DNMT1-212ENST00000587197 NWD1Q149M9 1564 aa25.28■■□□□ 1.64
DNMT1-212ENST00000587197 DIP2AQ14689 1571 aa25.27■■□□□ 1.64
DNMT1-212ENST00000587197 HSPA1LP34931 641 aa25.27■■□□□ 1.64
DNMT1-212ENST00000587197 DHX57Q6P158 1386 aaKnown RBP25.26■■□□□ 1.63
DNMT1-212ENST00000587197 PIK3R4Q99570 1358 aa25.26■■□□□ 1.63
DNMT1-212ENST00000587197 DISP3Q9P2K9 1392 aa25.25■■□□□ 1.63
DNMT1-212ENST00000587197 ALKQ9UM73 1620 aa25.25■■□□□ 1.63
DNMT1-212ENST00000587197 CHD2O14647 1828 aaKnown RBP25.24■■□□□ 1.63
DNMT1-212ENST00000587197 XIRP1Q702N8 1843 aaKnown RBP25.24■■□□□ 1.63
DNMT1-212ENST00000587197 SPATA31E1Q6ZUB1 1445 aa25.24■■□□□ 1.63
DNMT1-212ENST00000587197 ADAMTS13Q76LX8 1427 aa25.24■■□□□ 1.63
DNMT1-212ENST00000587197 RPGRIP1LQ68CZ1 1315 aa25.24■■□□□ 1.63
DNMT1-212ENST00000587197 KIF1BO60333 1816 aa25.23■■□□□ 1.63
DNMT1-212ENST00000587197 MSH6P52701 1360 aa25.2■■□□□ 1.63
DNMT1-212ENST00000587197 RBM33Q96EV2 1170 aaKnown RBP25.19■■□□□ 1.62
DNMT1-212ENST00000587197 NCOA3Q9Y6Q9 1424 aa25.18■■□□□ 1.62
DNMT1-212ENST00000587197 VGFO15240 615 aaPredicted RBP25.17■■□□□ 1.62
DNMT1-212ENST00000587197 SETBP1Q9Y6X0 1596 aa25.16■■□□□ 1.62
DNMT1-212ENST00000587197 C14orf37Q86TY3 774 aa25.15■■□□□ 1.62
DNMT1-212ENST00000587197 AMOTL2Q9Y2J4 779 aa25.15■■□□□ 1.62
DNMT1-212ENST00000587197 NEXMIFQ5QGS0 1516 aa25.15■■□□□ 1.62
DNMT1-212ENST00000587197 FAM135BQ49AJ0 1406 aa25.14■■□□□ 1.62
DNMT1-212ENST00000587197 RGL3Q3MIN7 710 aa25.14■■□□□ 1.62
DNMT1-212ENST00000587197 NRXN3Q9Y4C0 1643 aa25.1■■□□□ 1.61
DNMT1-212ENST00000587197 STAC3Q96MF2 364 aa25.09■■□□□ 1.61
DNMT1-212ENST00000587197 C19orf44Q9H6X5 657 aa25.09■■□□□ 1.61
DNMT1-212ENST00000587197 SLAIN2Q9P270 581 aa25.09■■□□□ 1.61
DNMT1-212ENST00000587197 PTPRUQ92729 1446 aa25.07■■□□□ 1.6
DNMT1-212ENST00000587197 CADPS2Q86UW7 1296 aa25.07■■□□□ 1.6
DNMT1-212ENST00000587197 ATF3P18847 181 aa25.06■■□□□ 1.6
DNMT1-212ENST00000587197 METP08581 1390 aa25.05■■□□□ 1.6
DNMT1-212ENST00000587197 SIN3AQ96ST3 1273 aa25.04■■□□□ 1.6
DNMT1-212ENST00000587197 CLSPNQ9HAW4 1339 aa25.04■■□□□ 1.6
DNMT1-212ENST00000587197 PPLO60437 1756 aa25.03■■□□□ 1.6
DNMT1-212ENST00000587197 ROBO1Q9Y6N7 1651 aa25.03■■□□□ 1.6
DNMT1-212ENST00000587197 XRN1Q8IZH2 1706 aaKnown RBP25.02■■□□□ 1.6
DNMT1-212ENST00000587197 ADGRF5Q8IZF2 1346 aa25.01■■□□□ 1.59
DNMT1-212ENST00000587197 MYOM2P54296 1465 aa25.01■■□□□ 1.59
DNMT1-212ENST00000587197 MED1Q15648 1581 aaPredicted RBP24.99■■□□□ 1.59
DNMT1-212ENST00000587197 IFT172Q9UG01 1749 aa24.99■■□□□ 1.59
DNMT1-212ENST00000587197 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.98■■□□□ 1.59
DNMT1-212ENST00000587197 NRXN1Q9ULB1 1477 aa24.98■■□□□ 1.59
DNMT1-212ENST00000587197 DCCP43146 1447 aa24.97■■□□□ 1.59
DNMT1-212ENST00000587197 NEUROD1Q13562 356 aa24.97■■□□□ 1.59
DNMT1-212ENST00000587197 DCAF11Q8TEB1 546 aa24.97■■□□□ 1.59
DNMT1-212ENST00000587197 PIK3C2GO75747 1445 aa24.96■■□□□ 1.59
DNMT1-212ENST00000587197 PHF23Q9BUL5 403 aaPredicted RBP24.96■■□□□ 1.59
DNMT1-212ENST00000587197 ILDR2Q71H61 639 aa24.95■■□□□ 1.58
DNMT1-212ENST00000587197 L3MBTL2Q969R5 705 aa24.92■■□□□ 1.58
DNMT1-212ENST00000587197 C14orf93Q9H972 538 aaKnown RBP24.91■■□□□ 1.58
DNMT1-212ENST00000587197 KDM2AQ9Y2K7 1162 aa24.91■■□□□ 1.58
DNMT1-212ENST00000587197 PTCH1Q13635 1447 aa24.91■■□□□ 1.58
DNMT1-212ENST00000587197 SETD1AO15047 1707 aaKnown RBP24.9■■□□□ 1.58
DNMT1-212ENST00000587197 ADGRL3Q9HAR2 1447 aa24.9■■□□□ 1.58
DNMT1-212ENST00000587197 PHLPP1O60346 1717 aa24.89■■□□□ 1.58
DNMT1-212ENST00000587197 CCER1Q8TC90 406 aaPredicted RBP24.89■■□□□ 1.58
DNMT1-212ENST00000587197 PRAG1Q86YV5 1406 aa24.86■■□□□ 1.57
DNMT1-212ENST00000587197 TONSLQ96HA7 1378 aa24.85■■□□□ 1.57
DNMT1-212ENST00000587197 ROBO2Q9HCK4 1378 aa24.85■■□□□ 1.57
DNMT1-212ENST00000587197 JCADQ9P266 1359 aa24.85■■□□□ 1.57
DNMT1-212ENST00000587197 CFAP70Q5T0N1 1121 aa24.84■■□□□ 1.57
DNMT1-212ENST00000587197 BRINP3Q76B58 766 aa24.84■■□□□ 1.57
DNMT1-212ENST00000587197 TIMELESSQ9UNS1 1208 aa24.84■■□□□ 1.57
DNMT1-212ENST00000587197 MST1RQ04912 1400 aa24.83■■□□□ 1.57
DNMT1-212ENST00000587197 SOCS7O14512 581 aa24.82■■□□□ 1.56
DNMT1-212ENST00000587197 AHDC1Q5TGY3 1603 aaPredicted RBP24.82■■□□□ 1.56
DNMT1-212ENST00000587197 NALCNQ8IZF0 1738 aa24.81■■□□□ 1.56
DNMT1-212ENST00000587197 LAMC1P11047 1609 aa24.8■■□□□ 1.56
DNMT1-212ENST00000587197 STK26Q9P289 416 aa24.8■■□□□ 1.56
DNMT1-212ENST00000587197 LRPPRCP42704 1394 aaKnown RBP24.8■■□□□ 1.56
DNMT1-212ENST00000587197 COL16A1Q07092 1604 aaPredicted RBP24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms