RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 LTBP4Q8N2S1 1624 aa24.98■■□□□ 1.59
VAT1-204ENST00000587147 CCDC144AA2RUR9 1427 aa24.98■■□□□ 1.59
VAT1-204ENST00000587147 CHGAP10645 457 aaKnown RBP24.97■■□□□ 1.59
VAT1-204ENST00000587147 PLEKHG1Q9ULL1 1385 aa24.96■■□□□ 1.59
VAT1-204ENST00000587147 IQSEC2Q5JU85 1478 aa24.95■■□□□ 1.58
VAT1-204ENST00000587147 CPS1P31327 1500 aa24.93■■□□□ 1.58
VAT1-204ENST00000587147 RPGRIP1LQ68CZ1 1315 aa24.92■■□□□ 1.58
VAT1-204ENST00000587147 FOXD1Q16676 465 aa24.92■■□□□ 1.58
VAT1-204ENST00000587147 PPP1R15AO75807 674 aaPredicted RBP24.91■■□□□ 1.58
VAT1-204ENST00000587147 DIP2AQ14689 1571 aa24.91■■□□□ 1.58
VAT1-204ENST00000587147 NEXMIFQ5QGS0 1516 aa24.91■■□□□ 1.58
VAT1-204ENST00000587147 ZNF335Q9H4Z2 1342 aaPredicted RBP24.89■■□□□ 1.58
VAT1-204ENST00000587147 CERKQ8TCT0 537 aa24.89■■□□□ 1.58
VAT1-204ENST00000587147 ANKRD30BQ9BXX2 1392 aa24.88■■□□□ 1.57
VAT1-204ENST00000587147 SPATA31E1Q6ZUB1 1445 aa24.87■■□□□ 1.57
VAT1-204ENST00000587147 ZNF326Q5BKZ1 582 aaKnown RBP24.87■■□□□ 1.57
VAT1-204ENST00000587147 SETBP1Q9Y6X0 1596 aa24.86■■□□□ 1.57
VAT1-204ENST00000587147 TBX22Q9Y458 520 aa24.84■■□□□ 1.57
VAT1-204ENST00000587147 PPLO60437 1756 aa24.84■■□□□ 1.57
VAT1-204ENST00000587147 PIK3R4Q99570 1358 aa24.83■■□□□ 1.57
VAT1-204ENST00000587147 VGFO15240 615 aaPredicted RBP24.82■■□□□ 1.56
VAT1-204ENST00000587147 NWD1Q149M9 1564 aa24.81■■□□□ 1.56
VAT1-204ENST00000587147 ADAMTS13Q76LX8 1427 aa24.81■■□□□ 1.56
VAT1-204ENST00000587147 IFT172Q9UG01 1749 aa24.81■■□□□ 1.56
VAT1-204ENST00000587147 NRXN3Q9Y4C0 1643 aa24.79■■□□□ 1.56
VAT1-204ENST00000587147 STRCP1A6NGW2 1772 aa24.79■■□□□ 1.56
VAT1-204ENST00000587147 NKTRP30414 1462 aaKnown RBP24.78■■□□□ 1.56
VAT1-204ENST00000587147 BCANQ96GW7 911 aa24.78■■□□□ 1.56
VAT1-204ENST00000587147 SLC26A8Q96RN1 970 aa24.78■■□□□ 1.56
VAT1-204ENST00000587147 CHD2O14647 1828 aaKnown RBP24.77■■□□□ 1.56
VAT1-204ENST00000587147 KCNA6P17658 529 aa24.77■■□□□ 1.56
VAT1-204ENST00000587147 FBXO41Q8TF61 875 aa24.75■■□□□ 1.55
VAT1-204ENST00000587147 NUTM2DQ5VT03 806 aaPredicted RBP24.74■■□□□ 1.55
VAT1-204ENST00000587147 LRRC7Q96NW7 1537 aa24.73■■□□□ 1.55
VAT1-204ENST00000587147 STAC3Q96MF2 364 aa24.72■■□□□ 1.55
VAT1-204ENST00000587147 MYOM2P54296 1465 aa24.71■■□□□ 1.55
VAT1-204ENST00000587147 RGL3Q3MIN7 710 aa24.68■■□□□ 1.54
VAT1-204ENST00000587147 SETD1AO15047 1707 aaKnown RBP24.68■■□□□ 1.54
VAT1-204ENST00000587147 NRXN1Q9ULB1 1477 aa24.68■■□□□ 1.54
VAT1-204ENST00000587147 NCOA3Q9Y6Q9 1424 aa24.67■■□□□ 1.54
VAT1-204ENST00000587147 ALKQ9UM73 1620 aa24.66■■□□□ 1.54
VAT1-204ENST00000587147 PIK3C2GO75747 1445 aa24.66■■□□□ 1.54
VAT1-204ENST00000587147 XRN1Q8IZH2 1706 aaKnown RBP24.66■■□□□ 1.54
VAT1-204ENST00000587147 PRAG1Q86YV5 1406 aa24.65■■□□□ 1.54
VAT1-204ENST00000587147 DHX57Q6P158 1386 aaKnown RBP24.65■■□□□ 1.54
VAT1-204ENST00000587147 LAMC1P11047 1609 aa24.64■■□□□ 1.53
VAT1-204ENST00000587147 XIRP1Q702N8 1843 aaKnown RBP24.63■■□□□ 1.53
VAT1-204ENST00000587147 ADGRF5Q8IZF2 1346 aa24.61■■□□□ 1.53
VAT1-204ENST00000587147 METP08581 1390 aa24.61■■□□□ 1.53
VAT1-204ENST00000587147 TMEM94Q12767 1356 aa24.6■■□□□ 1.53
VAT1-204ENST00000587147 PTPRUQ92729 1446 aa24.6■■□□□ 1.53
VAT1-204ENST00000587147 PROSER2Q86WR7 435 aaPredicted RBP24.59■■□□□ 1.53
VAT1-204ENST00000587147 AMOTL2Q9Y2J4 779 aa24.58■■□□□ 1.53
VAT1-204ENST00000587147 TOM1O60784 492 aa24.57■■□□□ 1.52
VAT1-204ENST00000587147 SENP3Q9H4L4 574 aaPredicted RBP24.57■■□□□ 1.52
VAT1-204ENST00000587147 PTCH1Q13635 1447 aa24.57■■□□□ 1.52
VAT1-204ENST00000587147 ILDR1Q86SU0 546 aaPredicted RBP24.56■■□□□ 1.52
VAT1-204ENST00000587147 UBAP1LF5GYI3 381 aa24.54■■□□□ 1.52
VAT1-204ENST00000587147 C14orf93Q9H972 538 aaKnown RBP24.53■■□□□ 1.52
VAT1-204ENST00000587147 TECPR2O15040 1411 aa24.52■■□□□ 1.52
VAT1-204ENST00000587147 DCAF11Q8TEB1 546 aa24.52■■□□□ 1.52
VAT1-204ENST00000587147 MSH6P52701 1360 aa24.52■■□□□ 1.52
VAT1-204ENST00000587147 KNDC1Q76NI1 1749 aa24.51■■□□□ 1.51
VAT1-204ENST00000587147 DCCP43146 1447 aa24.5■■□□□ 1.51
VAT1-204ENST00000587147 LRPPRCP42704 1394 aaKnown RBP24.49■■□□□ 1.51
VAT1-204ENST00000587147 ASXL1Q8IXJ9 1541 aa24.49■■□□□ 1.51
VAT1-204ENST00000587147 ABCC11Q96J66 1382 aa24.48■■□□□ 1.51
VAT1-204ENST00000587147 PCGF6Q9BYE7 350 aa24.48■■□□□ 1.51
VAT1-204ENST00000587147 KIAA1210Q9ULL0 1709 aa24.47■■□□□ 1.51
VAT1-204ENST00000587147 C19orf44Q9H6X5 657 aa24.46■■□□□ 1.51
VAT1-204ENST00000587147 YTHDC2Q9H6S0 1430 aaKnown RBP24.44■■□□□ 1.5
VAT1-204ENST00000587147 SIRT1Q96EB6 747 aa24.44■■□□□ 1.5
VAT1-204ENST00000587147 ADGRB1O14514 1584 aa24.44■■□□□ 1.5
VAT1-204ENST00000587147 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.44■■□□□ 1.5
VAT1-204ENST00000587147 ADGRL3Q9HAR2 1447 aa24.44■■□□□ 1.5
VAT1-204ENST00000587147 CLSPNQ9HAW4 1339 aa24.43■■□□□ 1.5
VAT1-204ENST00000587147 KDM2AQ9Y2K7 1162 aa24.43■■□□□ 1.5
VAT1-204ENST00000587147 FAM135BQ49AJ0 1406 aa24.43■■□□□ 1.5
VAT1-204ENST00000587147 ROBO2Q9HCK4 1378 aa24.42■■□□□ 1.5
VAT1-204ENST00000587147 CFAP70Q5T0N1 1121 aa24.42■■□□□ 1.5
VAT1-204ENST00000587147 CADPS2Q86UW7 1296 aa24.42■■□□□ 1.5
VAT1-204ENST00000587147 DLC1Q96QB1 1528 aa24.41■■□□□ 1.5
VAT1-204ENST00000587147 SIN3AQ96ST3 1273 aa24.41■■□□□ 1.5
VAT1-204ENST00000587147 C14orf37Q86TY3 774 aa24.4■■□□□ 1.5
VAT1-204ENST00000587147 NALCNQ8IZF0 1738 aa24.39■■□□□ 1.5
VAT1-204ENST00000587147 L3MBTL2Q969R5 705 aa24.38■■□□□ 1.49
VAT1-204ENST00000587147 RBM33Q96EV2 1170 aaKnown RBP24.38■■□□□ 1.49
VAT1-204ENST00000587147 ATF3P18847 181 aa24.37■■□□□ 1.49
VAT1-204ENST00000587147 TMEM132EQ6IEE7 984 aa24.37■■□□□ 1.49
VAT1-204ENST00000587147 NEUROD1Q13562 356 aa24.36■■□□□ 1.49
VAT1-204ENST00000587147 CDC42BPGQ6DT37 1551 aa24.34■■□□□ 1.49
VAT1-204ENST00000587147 PIP4K2BP78356 416 aa24.34■■□□□ 1.49
VAT1-204ENST00000587147 SLAIN2Q9P270 581 aa24.34■■□□□ 1.49
VAT1-204ENST00000587147 TONSLQ96HA7 1378 aa24.32■■□□□ 1.48
VAT1-204ENST00000587147 STK26Q9P289 416 aa24.32■■□□□ 1.48
VAT1-204ENST00000587147 ROBO1Q9Y6N7 1651 aa24.31■■□□□ 1.48
VAT1-204ENST00000587147 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
VAT1-204ENST00000587147 TRPM1Q7Z4N2 1603 aa24.28■■□□□ 1.48
VAT1-204ENST00000587147 MST1RQ04912 1400 aa24.28■■□□□ 1.48
VAT1-204ENST00000587147 TIMELESSQ9UNS1 1208 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms