RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 STRCQ7RTU9 1775 aa26.27■■□□□ 1.8
RETREG3-205ENST00000586870 CCDC144AA2RUR9 1427 aa26.27■■□□□ 1.8
RETREG3-205ENST00000586870 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.26■■□□□ 1.79
RETREG3-205ENST00000586870 SCAF11Q99590 1463 aaKnown RBP26.23■■□□□ 1.79
RETREG3-205ENST00000586870 SLIT1O75093 1534 aa26.23■■□□□ 1.79
RETREG3-205ENST00000586870 NUTM2DQ5VT03 806 aaPredicted RBP26.23■■□□□ 1.79
RETREG3-205ENST00000586870 MIER1Q8N108 512 aa26.23■■□□□ 1.79
RETREG3-205ENST00000586870 NPHP4O75161 1426 aaPredicted RBP26.23■■□□□ 1.79
RETREG3-205ENST00000586870 ARHGAP23Q9P227 1491 aa26.23■■□□□ 1.79
RETREG3-205ENST00000586870 RIMS2Q9UQ26 1411 aa26.21■■□□□ 1.79
RETREG3-205ENST00000586870 KDM5AP29375 1690 aaKnown RBP26.21■■□□□ 1.79
RETREG3-205ENST00000586870 TMEM131LA2VDJ0 1609 aa26.2■■□□□ 1.78
RETREG3-205ENST00000586870 SENP3Q9H4L4 574 aaPredicted RBP26.2■■□□□ 1.78
RETREG3-205ENST00000586870 CLTCL1P53675 1640 aa26.19■■□□□ 1.78
RETREG3-205ENST00000586870 RGL3Q3MIN7 710 aa26.18■■□□□ 1.78
RETREG3-205ENST00000586870 ILDR1Q86SU0 546 aaPredicted RBP26.17■■□□□ 1.78
RETREG3-205ENST00000586870 MED14O60244 1454 aa26.17■■□□□ 1.78
RETREG3-205ENST00000586870 L3MBTL2Q969R5 705 aa26.14■■□□□ 1.78
RETREG3-205ENST00000586870 RPGRIP1LQ68CZ1 1315 aa26.13■■□□□ 1.77
RETREG3-205ENST00000586870 NEURL4Q96JN8 1562 aa26.13■■□□□ 1.77
RETREG3-205ENST00000586870 ZFYVE9O95405 1425 aa26.13■■□□□ 1.77
RETREG3-205ENST00000586870 POLR1AO95602 1720 aaPredicted RBP26.13■■□□□ 1.77
RETREG3-205ENST00000586870 SLC26A8Q96RN1 970 aa26.12■■□□□ 1.77
RETREG3-205ENST00000586870 VGFO15240 615 aaPredicted RBP26.11■■□□□ 1.77
RETREG3-205ENST00000586870 ZNF335Q9H4Z2 1342 aaPredicted RBP26.1■■□□□ 1.77
RETREG3-205ENST00000586870 PLEKHG1Q9ULL1 1385 aa26.09■■□□□ 1.77
RETREG3-205ENST00000586870 KIF1BO60333 1816 aa26.08■■□□□ 1.77
RETREG3-205ENST00000586870 MYO5BQ9ULV0 1848 aa26.07■■□□□ 1.76
RETREG3-205ENST00000586870 IQGAP1P46940 1657 aa26.07■■□□□ 1.76
RETREG3-205ENST00000586870 SPATA31E1Q6ZUB1 1445 aa26.03■■□□□ 1.76
RETREG3-205ENST00000586870 TBX22Q9Y458 520 aa26.02■■□□□ 1.76
RETREG3-205ENST00000586870 CENPBP07199 599 aaPredicted RBP26.01■■□□□ 1.75
RETREG3-205ENST00000586870 FBXO41Q8TF61 875 aa26.01■■□□□ 1.75
RETREG3-205ENST00000586870 CERKQ8TCT0 537 aa26■■□□□ 1.75
RETREG3-205ENST00000586870 NEXMIFQ5QGS0 1516 aa25.99■■□□□ 1.75
RETREG3-205ENST00000586870 HIRIP3Q9BW71 556 aaPredicted RBP25.97■■□□□ 1.75
RETREG3-205ENST00000586870 KDM2AQ9Y2K7 1162 aa25.96■■□□□ 1.75
RETREG3-205ENST00000586870 KCNA6P17658 529 aa25.96■■□□□ 1.75
RETREG3-205ENST00000586870 DCAF11Q8TEB1 546 aa25.96■■□□□ 1.75
RETREG3-205ENST00000586870 EIF4G2P78344 907 aaKnown RBP eCLIP25.95■■□□□ 1.74
RETREG3-205ENST00000586870 DDX10Q13206 875 aaKnown RBP25.95■■□□□ 1.74
RETREG3-205ENST00000586870 NBPF8Q3BBV2 869 aa25.95■■□□□ 1.74
RETREG3-205ENST00000586870 ADGRF5Q8IZF2 1346 aa25.94■■□□□ 1.74
RETREG3-205ENST00000586870 ADAMTS13Q76LX8 1427 aa25.93■■□□□ 1.74
RETREG3-205ENST00000586870 HSPA5P11021 654 aaKnown RBP25.92■■□□□ 1.74
RETREG3-205ENST00000586870 LTBP4Q8N2S1 1624 aa25.91■■□□□ 1.74
RETREG3-205ENST00000586870 STAC3Q96MF2 364 aa25.9■■□□□ 1.74
RETREG3-205ENST00000586870 PROSER2Q86WR7 435 aaPredicted RBP25.89■■□□□ 1.74
RETREG3-205ENST00000586870 CPS1P31327 1500 aa25.89■■□□□ 1.73
RETREG3-205ENST00000586870 AMOTL2Q9Y2J4 779 aa25.88■■□□□ 1.73
RETREG3-205ENST00000586870 PIK3R4Q99570 1358 aa25.87■■□□□ 1.73
RETREG3-205ENST00000586870 DIP2AQ14689 1571 aa25.86■■□□□ 1.73
RETREG3-205ENST00000586870 SETBP1Q9Y6X0 1596 aa25.86■■□□□ 1.73
RETREG3-205ENST00000586870 PPLO60437 1756 aa25.85■■□□□ 1.73
RETREG3-205ENST00000586870 METP08581 1390 aa25.84■■□□□ 1.73
RETREG3-205ENST00000586870 MYOM2P54296 1465 aa25.81■■□□□ 1.72
RETREG3-205ENST00000586870 YTHDC1Q96MU7 727 aaKnown RBP25.81■■□□□ 1.72
RETREG3-205ENST00000586870 CFAP70Q5T0N1 1121 aa25.8■■□□□ 1.72
RETREG3-205ENST00000586870 C14orf37Q86TY3 774 aa25.8■■□□□ 1.72
RETREG3-205ENST00000586870 RBM33Q96EV2 1170 aaKnown RBP25.8■■□□□ 1.72
RETREG3-205ENST00000586870 C14orf93Q9H972 538 aaKnown RBP25.8■■□□□ 1.72
RETREG3-205ENST00000586870 PIK3C2GO75747 1445 aa25.79■■□□□ 1.72
RETREG3-205ENST00000586870 ALKQ9UM73 1620 aa25.78■■□□□ 1.72
RETREG3-205ENST00000586870 NRXN3Q9Y4C0 1643 aa25.78■■□□□ 1.72
RETREG3-205ENST00000586870 LRRC7Q96NW7 1537 aa25.78■■□□□ 1.72
RETREG3-205ENST00000586870 TMEM132EQ6IEE7 984 aa25.77■■□□□ 1.72
RETREG3-205ENST00000586870 IQSEC2Q5JU85 1478 aa25.77■■□□□ 1.72
RETREG3-205ENST00000586870 TMEM94Q12767 1356 aa25.77■■□□□ 1.72
RETREG3-205ENST00000586870 STK26Q9P289 416 aa25.77■■□□□ 1.72
RETREG3-205ENST00000586870 RALGAPBQ86X10 1494 aa25.76■■□□□ 1.71
RETREG3-205ENST00000586870 UBAP1LF5GYI3 381 aa25.76■■□□□ 1.71
RETREG3-205ENST00000586870 PTPRUQ92729 1446 aa25.76■■□□□ 1.71
RETREG3-205ENST00000586870 NKTRP30414 1462 aaKnown RBP25.75■■□□□ 1.71
RETREG3-205ENST00000586870 IFT172Q9UG01 1749 aa25.75■■□□□ 1.71
RETREG3-205ENST00000586870 WASHC2AQ641Q2 1341 aa25.75■■□□□ 1.71
RETREG3-205ENST00000586870 TOM1O60784 492 aa25.74■■□□□ 1.71
RETREG3-205ENST00000586870 NRXN1Q9ULB1 1477 aa25.73■■□□□ 1.71
RETREG3-205ENST00000586870 STRCP1A6NGW2 1772 aa25.73■■□□□ 1.71
RETREG3-205ENST00000586870 ANP32CO43423 234 aa25.73■■□□□ 1.71
RETREG3-205ENST00000586870 NWD1Q149M9 1564 aa25.72■■□□□ 1.71
RETREG3-205ENST00000586870 CHD2O14647 1828 aaKnown RBP25.7■■□□□ 1.71
RETREG3-205ENST00000586870 CCDC7Q96M83 1385 aa25.7■■□□□ 1.7
RETREG3-205ENST00000586870 SCAF1Q9H7N4 1312 aaKnown RBP25.69■■□□□ 1.7
RETREG3-205ENST00000586870 CCER2I3L3R5 266 aa25.68■■□□□ 1.7
RETREG3-205ENST00000586870 MSH6P52701 1360 aa25.68■■□□□ 1.7
RETREG3-205ENST00000586870 LRPPRCP42704 1394 aaKnown RBP25.67■■□□□ 1.7
RETREG3-205ENST00000586870 USP47Q96K76 1375 aa25.67■■□□□ 1.7
RETREG3-205ENST00000586870 PIP4K2BP78356 416 aa25.66■■□□□ 1.7
RETREG3-205ENST00000586870 C19orf44Q9H6X5 657 aa25.65■■□□□ 1.7
RETREG3-205ENST00000586870 NCOA3Q9Y6Q9 1424 aa25.64■■□□□ 1.7
RETREG3-205ENST00000586870 YTHDC2Q9H6S0 1430 aaKnown RBP25.64■■□□□ 1.69
RETREG3-205ENST00000586870 ATF3P18847 181 aa25.63■■□□□ 1.69
RETREG3-205ENST00000586870 ABCC11Q96J66 1382 aa25.63■■□□□ 1.69
RETREG3-205ENST00000586870 PRAG1Q86YV5 1406 aa25.63■■□□□ 1.69
RETREG3-205ENST00000586870 C11orf95C9JLR9 678 aaPredicted RBP25.63■■□□□ 1.69
RETREG3-205ENST00000586870 ROBO2Q9HCK4 1378 aa25.62■■□□□ 1.69
RETREG3-205ENST00000586870 TRAK1Q9UPV9 953 aa25.62■■□□□ 1.69
RETREG3-205ENST00000586870 LAMC1P11047 1609 aa25.61■■□□□ 1.69
RETREG3-205ENST00000586870 CARD11Q9BXL7 1154 aa25.61■■□□□ 1.69
RETREG3-205ENST00000586870 PTCH1Q13635 1447 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms