RNA–Protein interactions for RNA: ENST00000585843.1

DNMT1-204, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 911 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-204ENST00000585843 ZNF326Q5BKZ1 582 aaKnown RBP20.64■□□□□ 0.89
DNMT1-204ENST00000585843 CLTCL1P53675 1640 aa20.64■□□□□ 0.89
DNMT1-204ENST00000585843 ZFYVE9O95405 1425 aa20.63■□□□□ 0.89
DNMT1-204ENST00000585843 MYO5BQ9ULV0 1848 aa20.63■□□□□ 0.89
DNMT1-204ENST00000585843 CERKQ8TCT0 537 aa20.62■□□□□ 0.89
DNMT1-204ENST00000585843 BCANQ96GW7 911 aa20.62■□□□□ 0.89
DNMT1-204ENST00000585843 CCDC144AA2RUR9 1427 aa20.6■□□□□ 0.89
DNMT1-204ENST00000585843 NUTM2DQ5VT03 806 aaPredicted RBP20.59■□□□□ 0.89
DNMT1-204ENST00000585843 LTBP4Q8N2S1 1624 aa20.59■□□□□ 0.89
DNMT1-204ENST00000585843 PLEKHG1Q9ULL1 1385 aa20.58■□□□□ 0.88
DNMT1-204ENST00000585843 SLC26A8Q96RN1 970 aa20.57■□□□□ 0.88
DNMT1-204ENST00000585843 KIF1BO60333 1816 aa20.57■□□□□ 0.88
DNMT1-204ENST00000585843 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
DNMT1-204ENST00000585843 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
DNMT1-204ENST00000585843 ANKRD30BQ9BXX2 1392 aa20.51■□□□□ 0.87
DNMT1-204ENST00000585843 TBX22Q9Y458 520 aa20.51■□□□□ 0.87
DNMT1-204ENST00000585843 CPS1P31327 1500 aa20.51■□□□□ 0.87
DNMT1-204ENST00000585843 VGFO15240 615 aaPredicted RBP20.5■□□□□ 0.87
DNMT1-204ENST00000585843 RGL3Q3MIN7 710 aa20.5■□□□□ 0.87
DNMT1-204ENST00000585843 NEXMIFQ5QGS0 1516 aa20.49■□□□□ 0.87
DNMT1-204ENST00000585843 FBXO41Q8TF61 875 aa20.49■□□□□ 0.87
DNMT1-204ENST00000585843 SPATA31E1Q6ZUB1 1445 aa20.49■□□□□ 0.87
DNMT1-204ENST00000585843 IQSEC2Q5JU85 1478 aa20.48■□□□□ 0.87
DNMT1-204ENST00000585843 KCNA6P17658 529 aa20.47■□□□□ 0.87
DNMT1-204ENST00000585843 ADAMTS13Q76LX8 1427 aa20.46■□□□□ 0.87
DNMT1-204ENST00000585843 DIP2AQ14689 1571 aa20.44■□□□□ 0.86
DNMT1-204ENST00000585843 ILDR1Q86SU0 546 aaPredicted RBP20.44■□□□□ 0.86
DNMT1-204ENST00000585843 SETBP1Q9Y6X0 1596 aa20.43■□□□□ 0.86
DNMT1-204ENST00000585843 STRCP1A6NGW2 1772 aa20.43■□□□□ 0.86
DNMT1-204ENST00000585843 PIK3R4Q99570 1358 aa20.42■□□□□ 0.86
DNMT1-204ENST00000585843 LRRC7Q96NW7 1537 aa20.41■□□□□ 0.86
DNMT1-204ENST00000585843 PPLO60437 1756 aa20.4■□□□□ 0.86
DNMT1-204ENST00000585843 PROSER2Q86WR7 435 aaPredicted RBP20.4■□□□□ 0.86
DNMT1-204ENST00000585843 NRXN3Q9Y4C0 1643 aa20.39■□□□□ 0.86
DNMT1-204ENST00000585843 ADGRF5Q8IZF2 1346 aa20.38■□□□□ 0.85
DNMT1-204ENST00000585843 UBAP1LF5GYI3 381 aa20.38■□□□□ 0.85
DNMT1-204ENST00000585843 NWD1Q149M9 1564 aa20.38■□□□□ 0.85
DNMT1-204ENST00000585843 NKTRP30414 1462 aaKnown RBP20.37■□□□□ 0.85
DNMT1-204ENST00000585843 AMOTL2Q9Y2J4 779 aa20.36■□□□□ 0.85
DNMT1-204ENST00000585843 CHD2O14647 1828 aaKnown RBP20.36■□□□□ 0.85
DNMT1-204ENST00000585843 METP08581 1390 aa20.35■□□□□ 0.85
DNMT1-204ENST00000585843 TMEM94Q12767 1356 aa20.34■□□□□ 0.85
DNMT1-204ENST00000585843 IFT172Q9UG01 1749 aa20.34■□□□□ 0.85
DNMT1-204ENST00000585843 TOM1O60784 492 aa20.34■□□□□ 0.85
DNMT1-204ENST00000585843 ALKQ9UM73 1620 aa20.33■□□□□ 0.84
DNMT1-204ENST00000585843 PTPRUQ92729 1446 aa20.33■□□□□ 0.84
DNMT1-204ENST00000585843 DHX57Q6P158 1386 aaKnown RBP20.33■□□□□ 0.84
DNMT1-204ENST00000585843 RBM33Q96EV2 1170 aaKnown RBP20.32■□□□□ 0.84
DNMT1-204ENST00000585843 PCGF6Q9BYE7 350 aa20.32■□□□□ 0.84
DNMT1-204ENST00000585843 DCAF11Q8TEB1 546 aa20.31■□□□□ 0.84
DNMT1-204ENST00000585843 STAC3Q96MF2 364 aa20.31■□□□□ 0.84
DNMT1-204ENST00000585843 MYOM2P54296 1465 aa20.3■□□□□ 0.84
DNMT1-204ENST00000585843 KDM2AQ9Y2K7 1162 aa20.3■□□□□ 0.84
DNMT1-204ENST00000585843 PIK3C2GO75747 1445 aa20.29■□□□□ 0.84
DNMT1-204ENST00000585843 NRXN1Q9ULB1 1477 aa20.27■□□□□ 0.84
DNMT1-204ENST00000585843 C14orf37Q86TY3 774 aa20.27■□□□□ 0.84
DNMT1-204ENST00000585843 C14orf93Q9H972 538 aaKnown RBP20.27■□□□□ 0.84
DNMT1-204ENST00000585843 XIRP1Q702N8 1843 aaKnown RBP20.27■□□□□ 0.84
DNMT1-204ENST00000585843 NCOA3Q9Y6Q9 1424 aa20.27■□□□□ 0.83
DNMT1-204ENST00000585843 SIN3AQ96ST3 1273 aa20.26■□□□□ 0.83
DNMT1-204ENST00000585843 SETD1AO15047 1707 aaKnown RBP20.26■□□□□ 0.83
DNMT1-204ENST00000585843 XRN1Q8IZH2 1706 aaKnown RBP20.26■□□□□ 0.83
DNMT1-204ENST00000585843 MSH6P52701 1360 aa20.25■□□□□ 0.83
DNMT1-204ENST00000585843 PIP4K2BP78356 416 aa20.25■□□□□ 0.83
DNMT1-204ENST00000585843 NEUROD1Q13562 356 aa20.25■□□□□ 0.83
DNMT1-204ENST00000585843 SCAF1Q9H7N4 1312 aaKnown RBP20.25■□□□□ 0.83
DNMT1-204ENST00000585843 CFAP70Q5T0N1 1121 aa20.24■□□□□ 0.83
DNMT1-204ENST00000585843 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
DNMT1-204ENST00000585843 C19orf44Q9H6X5 657 aa20.22■□□□□ 0.83
DNMT1-204ENST00000585843 STK26Q9P289 416 aa20.22■□□□□ 0.83
DNMT1-204ENST00000585843 PTCH1Q13635 1447 aa20.2■□□□□ 0.82
DNMT1-204ENST00000585843 LRPPRCP42704 1394 aaKnown RBP20.2■□□□□ 0.82
DNMT1-204ENST00000585843 PRAG1Q86YV5 1406 aa20.19■□□□□ 0.82
DNMT1-204ENST00000585843 LAMC1P11047 1609 aa20.19■□□□□ 0.82
DNMT1-204ENST00000585843 ROBO2Q9HCK4 1378 aa20.19■□□□□ 0.82
DNMT1-204ENST00000585843 ATF3P18847 181 aa20.18■□□□□ 0.82
DNMT1-204ENST00000585843 L3MBTL2Q969R5 705 aa20.18■□□□□ 0.82
DNMT1-204ENST00000585843 ABCC11Q96J66 1382 aa20.18■□□□□ 0.82
DNMT1-204ENST00000585843 CADPS2Q86UW7 1296 aa20.17■□□□□ 0.82
DNMT1-204ENST00000585843 YTHDC2Q9H6S0 1430 aaKnown RBP20.17■□□□□ 0.82
DNMT1-204ENST00000585843 ASXL1Q8IXJ9 1541 aa20.17■□□□□ 0.82
DNMT1-204ENST00000585843 SLAIN2Q9P270 581 aa20.16■□□□□ 0.82
DNMT1-204ENST00000585843 TECPR2O15040 1411 aa20.15■□□□□ 0.82
DNMT1-204ENST00000585843 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.13■□□□□ 0.81
DNMT1-204ENST00000585843 ADGRL3Q9HAR2 1447 aa20.13■□□□□ 0.81
DNMT1-204ENST00000585843 SIRT1Q96EB6 747 aa20.13■□□□□ 0.81
DNMT1-204ENST00000585843 DCCP43146 1447 aa20.12■□□□□ 0.81
DNMT1-204ENST00000585843 WAPLQ7Z5K2 1190 aa20.12■□□□□ 0.81
DNMT1-204ENST00000585843 FAM135BQ49AJ0 1406 aa20.11■□□□□ 0.81
DNMT1-204ENST00000585843 ADGRB1O14514 1584 aa20.1■□□□□ 0.81
DNMT1-204ENST00000585843 HSPA1LP34931 641 aa20.1■□□□□ 0.81
DNMT1-204ENST00000585843 KNDC1Q76NI1 1749 aa20.1■□□□□ 0.81
DNMT1-204ENST00000585843 TONSLQ96HA7 1378 aa20.08■□□□□ 0.81
DNMT1-204ENST00000585843 TRAK1Q9UPV9 953 aa20.08■□□□□ 0.81
DNMT1-204ENST00000585843 NALCNQ8IZF0 1738 aa20.07■□□□□ 0.8
DNMT1-204ENST00000585843 PRAM1Q96QH2 718 aa20.07■□□□□ 0.8
DNMT1-204ENST00000585843 POGKQ9P215 609 aa20.07■□□□□ 0.8
DNMT1-204ENST00000585843 PLEKHH1Q9ULM0 1364 aa20.07■□□□□ 0.8
DNMT1-204ENST00000585843 KIAA1210Q9ULL0 1709 aa20.05■□□□□ 0.8
DNMT1-204ENST00000585843 DLC1Q96QB1 1528 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms