RNA–Protein interactions for RNA: ENST00000583211.5

LIMD2-211, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-211ENST00000583211 RIMS2Q9UQ26 1411 aa26.88■■□□□ 1.89
LIMD2-211ENST00000583211 HDGFP51858 240 aaKnown RBP26.87■■□□□ 1.89
LIMD2-211ENST00000583211 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.83■■□□□ 1.89
LIMD2-211ENST00000583211 NEXMIFQ5QGS0 1516 aa26.8■■□□□ 1.88
LIMD2-211ENST00000583211 PPLO60437 1756 aa26.8■■□□□ 1.88
LIMD2-211ENST00000583211 ANKRD30BQ9BXX2 1392 aa26.79■■□□□ 1.88
LIMD2-211ENST00000583211 PPP1R15AO75807 674 aaPredicted RBP26.78■■□□□ 1.88
LIMD2-211ENST00000583211 ZNF326Q5BKZ1 582 aaKnown RBP26.78■■□□□ 1.88
LIMD2-211ENST00000583211 PLEKHG1Q9ULL1 1385 aa26.78■■□□□ 1.88
LIMD2-211ENST00000583211 LTBP4Q8N2S1 1624 aa26.78■■□□□ 1.88
LIMD2-211ENST00000583211 SPATA31E1Q6ZUB1 1445 aa26.76■■□□□ 1.87
LIMD2-211ENST00000583211 IFT172Q9UG01 1749 aa26.76■■□□□ 1.87
LIMD2-211ENST00000583211 RPGRIP1LQ68CZ1 1315 aa26.74■■□□□ 1.87
LIMD2-211ENST00000583211 DIP2AQ14689 1571 aa26.72■■□□□ 1.87
LIMD2-211ENST00000583211 ZNF335Q9H4Z2 1342 aaPredicted RBP26.71■■□□□ 1.87
LIMD2-211ENST00000583211 STRCP1A6NGW2 1772 aa26.71■■□□□ 1.87
LIMD2-211ENST00000583211 SETBP1Q9Y6X0 1596 aa26.71■■□□□ 1.87
LIMD2-211ENST00000583211 NRXN3Q9Y4C0 1643 aa26.7■■□□□ 1.86
LIMD2-211ENST00000583211 CPS1P31327 1500 aa26.7■■□□□ 1.86
LIMD2-211ENST00000583211 NUTM2DQ5VT03 806 aaPredicted RBP26.69■■□□□ 1.86
LIMD2-211ENST00000583211 BCANQ96GW7 911 aa26.68■■□□□ 1.86
LIMD2-211ENST00000583211 CHD2O14647 1828 aaKnown RBP26.67■■□□□ 1.86
LIMD2-211ENST00000583211 ADAMTS13Q76LX8 1427 aa26.65■■□□□ 1.86
LIMD2-211ENST00000583211 VGFO15240 615 aaPredicted RBP26.65■■□□□ 1.86
LIMD2-211ENST00000583211 SLC26A8Q96RN1 970 aa26.65■■□□□ 1.86
LIMD2-211ENST00000583211 IQSEC2Q5JU85 1478 aa26.64■■□□□ 1.86
LIMD2-211ENST00000583211 NWD1Q149M9 1564 aa26.63■■□□□ 1.85
LIMD2-211ENST00000583211 CERKQ8TCT0 537 aa26.63■■□□□ 1.85
LIMD2-211ENST00000583211 TBX22Q9Y458 520 aa26.63■■□□□ 1.85
LIMD2-211ENST00000583211 DHX57Q6P158 1386 aaKnown RBP26.62■■□□□ 1.85
LIMD2-211ENST00000583211 RGL3Q3MIN7 710 aa26.62■■□□□ 1.85
LIMD2-211ENST00000583211 SETD1AO15047 1707 aaKnown RBP26.6■■□□□ 1.85
LIMD2-211ENST00000583211 PIK3R4Q99570 1358 aa26.59■■□□□ 1.85
LIMD2-211ENST00000583211 PCGF6Q9BYE7 350 aa26.58■■□□□ 1.85
LIMD2-211ENST00000583211 MYOM2P54296 1465 aa26.57■■□□□ 1.84
LIMD2-211ENST00000583211 SENP3Q9H4L4 574 aaPredicted RBP26.57■■□□□ 1.84
LIMD2-211ENST00000583211 KCNA6P17658 529 aa26.56■■□□□ 1.84
LIMD2-211ENST00000583211 NKTRP30414 1462 aaKnown RBP26.55■■□□□ 1.84
LIMD2-211ENST00000583211 XIRP1Q702N8 1843 aaKnown RBP26.55■■□□□ 1.84
LIMD2-211ENST00000583211 ALKQ9UM73 1620 aa26.54■■□□□ 1.84
LIMD2-211ENST00000583211 LRRC7Q96NW7 1537 aa26.54■■□□□ 1.84
LIMD2-211ENST00000583211 NRXN1Q9ULB1 1477 aa26.52■■□□□ 1.84
LIMD2-211ENST00000583211 XRN1Q8IZH2 1706 aaKnown RBP26.51■■□□□ 1.83
LIMD2-211ENST00000583211 PIK3C2GO75747 1445 aa26.51■■□□□ 1.83
LIMD2-211ENST00000583211 LAMC1P11047 1609 aa26.5■■□□□ 1.83
LIMD2-211ENST00000583211 ADGRF5Q8IZF2 1346 aa26.5■■□□□ 1.83
LIMD2-211ENST00000583211 STAC3Q96MF2 364 aa26.49■■□□□ 1.83
LIMD2-211ENST00000583211 METP08581 1390 aa26.46■■□□□ 1.83
LIMD2-211ENST00000583211 PTPRUQ92729 1446 aa26.46■■□□□ 1.83
LIMD2-211ENST00000583211 DCAF11Q8TEB1 546 aa26.43■■□□□ 1.82
LIMD2-211ENST00000583211 FBXO41Q8TF61 875 aa26.42■■□□□ 1.82
LIMD2-211ENST00000583211 AMOTL2Q9Y2J4 779 aa26.41■■□□□ 1.82
LIMD2-211ENST00000583211 PROSER2Q86WR7 435 aaPredicted RBP26.4■■□□□ 1.82
LIMD2-211ENST00000583211 SIN3AQ96ST3 1273 aa26.4■■□□□ 1.82
LIMD2-211ENST00000583211 TMEM94Q12767 1356 aa26.4■■□□□ 1.82
LIMD2-211ENST00000583211 PRAG1Q86YV5 1406 aa26.39■■□□□ 1.82
LIMD2-211ENST00000583211 KNDC1Q76NI1 1749 aa26.39■■□□□ 1.81
LIMD2-211ENST00000583211 NCOA3Q9Y6Q9 1424 aa26.39■■□□□ 1.81
LIMD2-211ENST00000583211 ASXL1Q8IXJ9 1541 aa26.38■■□□□ 1.81
LIMD2-211ENST00000583211 C14orf93Q9H972 538 aaKnown RBP26.37■■□□□ 1.81
LIMD2-211ENST00000583211 KIAA1210Q9ULL0 1709 aa26.36■■□□□ 1.81
LIMD2-211ENST00000583211 KDM2AQ9Y2K7 1162 aa26.36■■□□□ 1.81
LIMD2-211ENST00000583211 PTCH1Q13635 1447 aa26.36■■□□□ 1.81
LIMD2-211ENST00000583211 NEUROD1Q13562 356 aa26.34■■□□□ 1.81
LIMD2-211ENST00000583211 TECPR2O15040 1411 aa26.31■■□□□ 1.8
LIMD2-211ENST00000583211 CFAP70Q5T0N1 1121 aa26.31■■□□□ 1.8
LIMD2-211ENST00000583211 UBAP1LF5GYI3 381 aa26.3■■□□□ 1.8
LIMD2-211ENST00000583211 TOM1O60784 492 aa26.3■■□□□ 1.8
LIMD2-211ENST00000583211 L3MBTL2Q969R5 705 aa26.3■■□□□ 1.8
LIMD2-211ENST00000583211 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.3■■□□□ 1.8
LIMD2-211ENST00000583211 LRPPRCP42704 1394 aaKnown RBP26.3■■□□□ 1.8
LIMD2-211ENST00000583211 MSH6P52701 1360 aa26.3■■□□□ 1.8
LIMD2-211ENST00000583211 ADGRB1O14514 1584 aa26.29■■□□□ 1.8
LIMD2-211ENST00000583211 CLSPNQ9HAW4 1339 aa26.29■■□□□ 1.8
LIMD2-211ENST00000583211 YTHDC2Q9H6S0 1430 aaKnown RBP26.29■■□□□ 1.8
LIMD2-211ENST00000583211 RBM33Q96EV2 1170 aaKnown RBP26.28■■□□□ 1.8
LIMD2-211ENST00000583211 ABCC11Q96J66 1382 aa26.28■■□□□ 1.8
LIMD2-211ENST00000583211 NALCNQ8IZF0 1738 aa26.28■■□□□ 1.8
LIMD2-211ENST00000583211 TMEM132EQ6IEE7 984 aa26.27■■□□□ 1.8
LIMD2-211ENST00000583211 ILDR1Q86SU0 546 aaPredicted RBP26.27■■□□□ 1.8
LIMD2-211ENST00000583211 ROBO2Q9HCK4 1378 aa26.26■■□□□ 1.79
LIMD2-211ENST00000583211 TONSLQ96HA7 1378 aa26.24■■□□□ 1.79
LIMD2-211ENST00000583211 C14orf37Q86TY3 774 aa26.24■■□□□ 1.79
LIMD2-211ENST00000583211 C19orf44Q9H6X5 657 aa26.23■■□□□ 1.79
LIMD2-211ENST00000583211 DLC1Q96QB1 1528 aa26.23■■□□□ 1.79
LIMD2-211ENST00000583211 DCCP43146 1447 aa26.22■■□□□ 1.79
LIMD2-211ENST00000583211 ADGRL3Q9HAR2 1447 aa26.22■■□□□ 1.79
LIMD2-211ENST00000583211 TRPM1Q7Z4N2 1603 aa26.21■■□□□ 1.79
LIMD2-211ENST00000583211 FAM135BQ49AJ0 1406 aa26.21■■□□□ 1.79
LIMD2-211ENST00000583211 SIRT1Q96EB6 747 aa26.2■■□□□ 1.78
LIMD2-211ENST00000583211 STK26Q9P289 416 aa26.2■■□□□ 1.78
LIMD2-211ENST00000583211 ARHGEF28Q8N1W1 1705 aaKnown RBP26.18■■□□□ 1.78
LIMD2-211ENST00000583211 CADPS2Q86UW7 1296 aa26.17■■□□□ 1.78
LIMD2-211ENST00000583211 ATF3P18847 181 aa26.15■■□□□ 1.78
LIMD2-211ENST00000583211 PIP4K2BP78356 416 aa26.14■■□□□ 1.78
LIMD2-211ENST00000583211 CCER1Q8TC90 406 aaPredicted RBP26.14■■□□□ 1.78
LIMD2-211ENST00000583211 CDC42BPGQ6DT37 1551 aa26.14■■□□□ 1.78
LIMD2-211ENST00000583211 ROBO1Q9Y6N7 1651 aa26.14■■□□□ 1.78
LIMD2-211ENST00000583211 SCAF1Q9H7N4 1312 aaKnown RBP26.13■■□□□ 1.77
LIMD2-211ENST00000583211 PLEKHH1Q9ULM0 1364 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms