RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 ADGRB3O60242 1522 aa23.66■■□□□ 1.38
ERBB2-212ENST00000582788 IFT172Q9UG01 1749 aa23.65■■□□□ 1.38
ERBB2-212ENST00000582788 AGLP35573 1532 aa23.64■■□□□ 1.38
ERBB2-212ENST00000582788 MYOM2P54296 1465 aa23.63■■□□□ 1.37
ERBB2-212ENST00000582788 SYNMO15061 1565 aa23.62■■□□□ 1.37
ERBB2-212ENST00000582788 PRKRIP1Q9H875 184 aaPredicted RBP23.62■■□□□ 1.37
ERBB2-212ENST00000582788 CCDC184Q52MB2 194 aa23.61■■□□□ 1.37
ERBB2-212ENST00000582788 ARHGEF40Q8TER5 1519 aa23.61■■□□□ 1.37
ERBB2-212ENST00000582788 POLR3GLQ9BT43 218 aa23.6■■□□□ 1.37
ERBB2-212ENST00000582788 PIK3C2BO00750 1634 aa23.6■■□□□ 1.37
ERBB2-212ENST00000582788 CHGAP10645 457 aaKnown RBP23.59■■□□□ 1.37
ERBB2-212ENST00000582788 ADGRF5Q8IZF2 1346 aa23.58■■□□□ 1.37
ERBB2-212ENST00000582788 KIAA1210Q9ULL0 1709 aa23.58■■□□□ 1.36
ERBB2-212ENST00000582788 IQGAP1P46940 1657 aa23.57■■□□□ 1.36
ERBB2-212ENST00000582788 NRXN1Q9ULB1 1477 aa23.56■■□□□ 1.36
ERBB2-212ENST00000582788 TESK2Q96S53 571 aa23.55■■□□□ 1.36
ERBB2-212ENST00000582788 PREX1Q8TCU6 1659 aa23.55■■□□□ 1.36
ERBB2-212ENST00000582788 PPLO60437 1756 aa23.55■■□□□ 1.36
ERBB2-212ENST00000582788 ERICH6BQ5W0A0 696 aa23.54■■□□□ 1.36
ERBB2-212ENST00000582788 PPP6R1Q9UPN7 881 aa23.52■■□□□ 1.36
ERBB2-212ENST00000582788 CFAP70Q5T0N1 1121 aa23.52■■□□□ 1.36
ERBB2-212ENST00000582788 SCAF11Q99590 1463 aaKnown RBP23.51■■□□□ 1.35
ERBB2-212ENST00000582788 IDI1Q13907 227 aa23.51■■□□□ 1.35
ERBB2-212ENST00000582788 CLTCQ00610 1675 aaKnown RBP23.5■■□□□ 1.35
ERBB2-212ENST00000582788 ZBED9Q6R2W3 1325 aa23.5■■□□□ 1.35
ERBB2-212ENST00000582788 IRX6P78412 446 aaPredicted RBP23.5■■□□□ 1.35
ERBB2-212ENST00000582788 MRS2Q9HD23 443 aa23.5■■□□□ 1.35
ERBB2-212ENST00000582788 DISP3Q9P2K9 1392 aa23.49■■□□□ 1.35
ERBB2-212ENST00000582788 RPGRIP1LQ68CZ1 1315 aa23.49■■□□□ 1.35
ERBB2-212ENST00000582788 MLECQ14165 292 aa23.49■■□□□ 1.35
ERBB2-212ENST00000582788 FBXO31Q5XUX0 539 aaPredicted RBP23.49■■□□□ 1.35
ERBB2-212ENST00000582788 SLC52A1Q9NWF4 448 aa23.49■■□□□ 1.35
ERBB2-212ENST00000582788 ERVK-7P63135 1459 aa23.47■■□□□ 1.35
ERBB2-212ENST00000582788 PIK3C2GO75747 1445 aa23.46■■□□□ 1.35
ERBB2-212ENST00000582788 FAM9BQ8IZU0 186 aa23.45■■□□□ 1.35
ERBB2-212ENST00000582788 NEXMIFQ5QGS0 1516 aa23.45■■□□□ 1.34
ERBB2-212ENST00000582788 TMF1P82094 1093 aa23.43■■□□□ 1.34
ERBB2-212ENST00000582788 TMEM131LA2VDJ0 1609 aa23.43■■□□□ 1.34
ERBB2-212ENST00000582788 PPP4R2Q9NY27 417 aa23.42■■□□□ 1.34
ERBB2-212ENST00000582788 MYO5BQ9ULV0 1848 aa23.42■■□□□ 1.34
ERBB2-212ENST00000582788 SETBP1Q9Y6X0 1596 aa23.41■■□□□ 1.34
ERBB2-212ENST00000582788 EIF3AQ14152 1382 aaKnown RBP23.41■■□□□ 1.34
ERBB2-212ENST00000582788 C14orf93Q9H972 538 aaKnown RBP23.4■■□□□ 1.34
ERBB2-212ENST00000582788 NUTM2DQ5VT03 806 aaPredicted RBP23.39■■□□□ 1.34
ERBB2-212ENST00000582788 SPATA31D1Q6ZQQ2 1576 aa23.39■■□□□ 1.33
ERBB2-212ENST00000582788 VGFO15240 615 aaPredicted RBP23.38■■□□□ 1.33
ERBB2-212ENST00000582788 FANCIQ9NVI1 1328 aa23.37■■□□□ 1.33
ERBB2-212ENST00000582788 ADGRB1O14514 1584 aa23.37■■□□□ 1.33
ERBB2-212ENST00000582788 KDM4FA0A1W2PPD8 638 aa23.35■■□□□ 1.33
ERBB2-212ENST00000582788 CNGB1Q14028 1251 aaPredicted RBP23.35■■□□□ 1.33
ERBB2-212ENST00000582788 ZFYVE9O95405 1425 aa23.35■■□□□ 1.33
ERBB2-212ENST00000582788 MSH5O43196 834 aa23.34■■□□□ 1.33
ERBB2-212ENST00000582788 MYO3AQ8NEV4 1616 aa23.33■■□□□ 1.33
ERBB2-212ENST00000582788 ZMYM3Q14202 1370 aa23.33■■□□□ 1.33
ERBB2-212ENST00000582788 ESF1Q9H501 851 aaKnown RBP23.32■■□□□ 1.32
ERBB2-212ENST00000582788 PER1O15534 1290 aaPredicted RBP23.32■■□□□ 1.32
ERBB2-212ENST00000582788 TMEM132EQ6IEE7 984 aa23.32■■□□□ 1.32
ERBB2-212ENST00000582788 SMG6Q86US8 1419 aaKnown RBP23.31■■□□□ 1.32
ERBB2-212ENST00000582788 ADAMTSL3P82987 1691 aa23.29■■□□□ 1.32
ERBB2-212ENST00000582788 CDCA8Q53HL2 280 aa23.28■■□□□ 1.32
ERBB2-212ENST00000582788 PANK3Q9H999 370 aa23.28■■□□□ 1.32
ERBB2-212ENST00000582788 TRAK1Q9UPV9 953 aa23.28■■□□□ 1.32
ERBB2-212ENST00000582788 STAG3Q9UJ98 1225 aa23.28■■□□□ 1.32
ERBB2-212ENST00000582788 A2ML1A8K2U0 1454 aa23.27■■□□□ 1.32
ERBB2-212ENST00000582788 SBNO2Q9Y2G9 1366 aa23.26■■□□□ 1.31
ERBB2-212ENST00000582788 BCL11AQ9H165 835 aa23.26■■□□□ 1.31
ERBB2-212ENST00000582788 CENPJQ9HC77 1338 aaPredicted RBP23.25■■□□□ 1.31
ERBB2-212ENST00000582788 KDM5AP29375 1690 aaKnown RBP23.24■■□□□ 1.31
ERBB2-212ENST00000582788 MYOM1P52179 1685 aa23.24■■□□□ 1.31
ERBB2-212ENST00000582788 SLC24A1O60721 1099 aa23.24■■□□□ 1.31
ERBB2-212ENST00000582788 KTN1Q86UP2 1357 aaKnown RBP23.24■■□□□ 1.31
ERBB2-212ENST00000582788 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
ERBB2-212ENST00000582788 RALBP1Q15311 655 aa23.23■■□□□ 1.31
ERBB2-212ENST00000582788 B4GALNT3Q6L9W6 998 aa23.23■■□□□ 1.31
ERBB2-212ENST00000582788 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
ERBB2-212ENST00000582788 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
ERBB2-212ENST00000582788 QRICH2Q9H0J4 1663 aa23.22■■□□□ 1.31
ERBB2-212ENST00000582788 RNF123Q5XPI4 1314 aa23.2■■□□□ 1.31
ERBB2-212ENST00000582788 ARHGEF28Q8N1W1 1705 aaKnown RBP23.2■■□□□ 1.31
ERBB2-212ENST00000582788 PARD3Q8TEW0 1356 aa23.2■■□□□ 1.3
ERBB2-212ENST00000582788 NUDCQ9Y266 331 aa23.2■■□□□ 1.3
ERBB2-212ENST00000582788 FER1L4A9Z1Z3 1794 aa23.19■■□□□ 1.3
ERBB2-212ENST00000582788 MYBBP1AQ9BQG0 1328 aaKnown RBP23.19■■□□□ 1.3
ERBB2-212ENST00000582788 TNRQ92752 1358 aa23.18■■□□□ 1.3
ERBB2-212ENST00000582788 RIMS2Q9UQ26 1411 aa23.18■■□□□ 1.3
ERBB2-212ENST00000582788 RIMS1Q86UR5 1692 aaKnown RBP23.17■■□□□ 1.3
ERBB2-212ENST00000582788 ALKQ9UM73 1620 aa23.16■■□□□ 1.3
ERBB2-212ENST00000582788 PNISRQ8TF01 805 aaKnown RBP23.16■■□□□ 1.3
ERBB2-212ENST00000582788 CC2D1BQ5T0F9 858 aaKnown RBP23.15■■□□□ 1.3
ERBB2-212ENST00000582788 BRD4O60885 1362 aaPredicted RBP23.13■■□□□ 1.29
ERBB2-212ENST00000582788 TMC1Q8TDI8 760 aa23.13■■□□□ 1.29
ERBB2-212ENST00000582788 LRPPRCP42704 1394 aaKnown RBP23.12■■□□□ 1.29
ERBB2-212ENST00000582788 STK26Q9P289 416 aa23.12■■□□□ 1.29
ERBB2-212ENST00000582788 CEBPAP49715 358 aaPredicted RBP23.11■■□□□ 1.29
ERBB2-212ENST00000582788 KNSTRNQ9Y448 316 aa23.11■■□□□ 1.29
ERBB2-212ENST00000582788 PTPRMP28827 1452 aa23.11■■□□□ 1.29
ERBB2-212ENST00000582788 YTHDC2Q9H6S0 1430 aaKnown RBP23.11■■□□□ 1.29
ERBB2-212ENST00000582788 UBR1Q8IWV7 1749 aa23.1■■□□□ 1.29
ERBB2-212ENST00000582788 C3P01024 1663 aa23.1■■□□□ 1.29
ERBB2-212ENST00000582788 AMER1Q5JTC6 1135 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms