RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
SNORD3C-201ENST00000580533 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
SNORD3C-201ENST00000580533 SLIT1O75093 1534 aa16.89■□□□□ 0.29
SNORD3C-201ENST00000580533 RIMS2Q9UQ26 1411 aa16.87■□□□□ 0.29
SNORD3C-201ENST00000580533 ANKLE2Q86XL3 938 aa16.87■□□□□ 0.29
SNORD3C-201ENST00000580533 LMTK3Q96Q04 1460 aa16.86■□□□□ 0.29
SNORD3C-201ENST00000580533 ZFYVE9O95405 1425 aa16.86■□□□□ 0.29
SNORD3C-201ENST00000580533 MYOM2P54296 1465 aa16.86■□□□□ 0.29
SNORD3C-201ENST00000580533 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
SNORD3C-201ENST00000580533 DCAF11Q8TEB1 546 aa16.85■□□□□ 0.29
SNORD3C-201ENST00000580533 TXNDC2Q86VQ3 553 aa16.84■□□□□ 0.29
SNORD3C-201ENST00000580533 L3MBTL2Q969R5 705 aa16.84■□□□□ 0.29
SNORD3C-201ENST00000580533 SCAF11Q99590 1463 aaKnown RBP16.84■□□□□ 0.29
SNORD3C-201ENST00000580533 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
SNORD3C-201ENST00000580533 MYO5BQ9ULV0 1848 aa16.84■□□□□ 0.29
SNORD3C-201ENST00000580533 PPLO60437 1756 aa16.83■□□□□ 0.28
SNORD3C-201ENST00000580533 IFT172Q9UG01 1749 aa16.82■□□□□ 0.28
SNORD3C-201ENST00000580533 PLEKHG1Q9ULL1 1385 aa16.8■□□□□ 0.28
SNORD3C-201ENST00000580533 BCANQ96GW7 911 aa16.8■□□□□ 0.28
SNORD3C-201ENST00000580533 KDM2AQ9Y2K7 1162 aa16.8■□□□□ 0.28
SNORD3C-201ENST00000580533 POLR1AO95602 1720 aaPredicted RBP16.79■□□□□ 0.28
SNORD3C-201ENST00000580533 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
SNORD3C-201ENST00000580533 NRXN1Q9ULB1 1477 aa16.77■□□□□ 0.28
SNORD3C-201ENST00000580533 MED14O60244 1454 aa16.76■□□□□ 0.27
SNORD3C-201ENST00000580533 HSPA2P54652 639 aa16.76■□□□□ 0.27
SNORD3C-201ENST00000580533 LAMC1P11047 1609 aa16.76■□□□□ 0.27
SNORD3C-201ENST00000580533 NPHP4O75161 1426 aaPredicted RBP16.76■□□□□ 0.27
SNORD3C-201ENST00000580533 PIK3C2GO75747 1445 aa16.76■□□□□ 0.27
SNORD3C-201ENST00000580533 PRAG1Q86YV5 1406 aa16.76■□□□□ 0.27
SNORD3C-201ENST00000580533 DIP2AQ14689 1571 aa16.76■□□□□ 0.27
SNORD3C-201ENST00000580533 LTKP29376 864 aa16.75■□□□□ 0.27
SNORD3C-201ENST00000580533 NUTM2DQ5VT03 806 aaPredicted RBP16.75■□□□□ 0.27
SNORD3C-201ENST00000580533 SETBP1Q9Y6X0 1596 aa16.75■□□□□ 0.27
SNORD3C-201ENST00000580533 ADGRF5Q8IZF2 1346 aa16.74■□□□□ 0.27
SNORD3C-201ENST00000580533 IQGAP1P46940 1657 aa16.72■□□□□ 0.27
SNORD3C-201ENST00000580533 KIAA1210Q9ULL0 1709 aa16.72■□□□□ 0.27
SNORD3C-201ENST00000580533 NCKAP5LQ9HCH0 1330 aa16.71■□□□□ 0.27
SNORD3C-201ENST00000580533 C14orf93Q9H972 538 aaKnown RBP16.7■□□□□ 0.26
SNORD3C-201ENST00000580533 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
SNORD3C-201ENST00000580533 PIK3R4Q99570 1358 aa16.69■□□□□ 0.26
SNORD3C-201ENST00000580533 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
SNORD3C-201ENST00000580533 ROCK2O75116 1388 aaKnown RBP16.68■□□□□ 0.26
SNORD3C-201ENST00000580533 ALKQ9UM73 1620 aa16.68■□□□□ 0.26
SNORD3C-201ENST00000580533 ADAMTS13Q76LX8 1427 aa16.66■□□□□ 0.26
SNORD3C-201ENST00000580533 STRCQ7RTU9 1775 aa16.66■□□□□ 0.26
SNORD3C-201ENST00000580533 TRPM1Q7Z4N2 1603 aa16.66■□□□□ 0.26
SNORD3C-201ENST00000580533 NRXN3Q9Y4C0 1643 aa16.66■□□□□ 0.26
SNORD3C-201ENST00000580533 CFAP70Q5T0N1 1121 aa16.65■□□□□ 0.26
SNORD3C-201ENST00000580533 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
SNORD3C-201ENST00000580533 EIF3AQ14152 1382 aaKnown RBP16.64■□□□□ 0.26
SNORD3C-201ENST00000580533 NBPF8Q3BBV2 869 aa16.63■□□□□ 0.25
SNORD3C-201ENST00000580533 CARD11Q9BXL7 1154 aa16.63■□□□□ 0.25
SNORD3C-201ENST00000580533 GPRASP1Q5JY77 1395 aa16.63■□□□□ 0.25
SNORD3C-201ENST00000580533 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
SNORD3C-201ENST00000580533 SETD1AO15047 1707 aaKnown RBP16.6■□□□□ 0.25
SNORD3C-201ENST00000580533 LRPPRCP42704 1394 aaKnown RBP16.6■□□□□ 0.25
SNORD3C-201ENST00000580533 YTHDC2Q9H6S0 1430 aaKnown RBP16.6■□□□□ 0.25
SNORD3C-201ENST00000580533 ADGRB1O14514 1584 aa16.6■□□□□ 0.25
SNORD3C-201ENST00000580533 SLC24A1O60721 1099 aa16.59■□□□□ 0.25
SNORD3C-201ENST00000580533 METP08581 1390 aa16.59■□□□□ 0.25
SNORD3C-201ENST00000580533 KCNA6P17658 529 aa16.58■□□□□ 0.24
SNORD3C-201ENST00000580533 ABCC11Q96J66 1382 aa16.58■□□□□ 0.24
SNORD3C-201ENST00000580533 NBPF1Q3BBV0 1214 aa16.57■□□□□ 0.24
SNORD3C-201ENST00000580533 TMEM132EQ6IEE7 984 aa16.57■□□□□ 0.24
SNORD3C-201ENST00000580533 NWD1Q149M9 1564 aa16.56■□□□□ 0.24
SNORD3C-201ENST00000580533 DLC1Q96QB1 1528 aa16.56■□□□□ 0.24
SNORD3C-201ENST00000580533 NKTRP30414 1462 aaKnown RBP16.56■□□□□ 0.24
SNORD3C-201ENST00000580533 TECPR2O15040 1411 aa16.56■□□□□ 0.24
SNORD3C-201ENST00000580533 PTCH1Q13635 1447 aa16.56■□□□□ 0.24
SNORD3C-201ENST00000580533 SIRT1Q96EB6 747 aa16.56■□□□□ 0.24
SNORD3C-201ENST00000580533 AMOTL2Q9Y2J4 779 aa16.56■□□□□ 0.24
SNORD3C-201ENST00000580533 KNDC1Q76NI1 1749 aa16.56■□□□□ 0.24
SNORD3C-201ENST00000580533 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
SNORD3C-201ENST00000580533 STK26Q9P289 416 aa16.55■□□□□ 0.24
SNORD3C-201ENST00000580533 FAM135BQ49AJ0 1406 aa16.54■□□□□ 0.24
SNORD3C-201ENST00000580533 CHD2O14647 1828 aaKnown RBP16.54■□□□□ 0.24
SNORD3C-201ENST00000580533 EIF4G2P78344 907 aaKnown RBP eCLIP16.54■□□□□ 0.24
SNORD3C-201ENST00000580533 POGKQ9P215 609 aa16.54■□□□□ 0.24
SNORD3C-201ENST00000580533 TRAK1Q9UPV9 953 aa16.54■□□□□ 0.24
SNORD3C-201ENST00000580533 CPS1P31327 1500 aa16.54■□□□□ 0.24
SNORD3C-201ENST00000580533 USP47Q96K76 1375 aa16.53■□□□□ 0.24
SNORD3C-201ENST00000580533 XRN1Q8IZH2 1706 aaKnown RBP16.53■□□□□ 0.24
SNORD3C-201ENST00000580533 PTPRUQ92729 1446 aa16.51■□□□□ 0.23
SNORD3C-201ENST00000580533 NCOA3Q9Y6Q9 1424 aa16.51■□□□□ 0.23
SNORD3C-201ENST00000580533 CENPJQ9HC77 1338 aaPredicted RBP16.5■□□□□ 0.23
SNORD3C-201ENST00000580533 PROSER2Q86WR7 435 aaPredicted RBP16.49■□□□□ 0.23
SNORD3C-201ENST00000580533 ARHGEF28Q8N1W1 1705 aaKnown RBP16.48■□□□□ 0.23
SNORD3C-201ENST00000580533 PRAM1Q96QH2 718 aa16.48■□□□□ 0.23
SNORD3C-201ENST00000580533 ZNF335Q9H4Z2 1342 aaPredicted RBP16.47■□□□□ 0.23
SNORD3C-201ENST00000580533 C14orf37Q86TY3 774 aa16.47■□□□□ 0.23
SNORD3C-201ENST00000580533 ROBO2Q9HCK4 1378 aa16.47■□□□□ 0.23
SNORD3C-201ENST00000580533 SBNO2Q9Y2G9 1366 aa16.47■□□□□ 0.23
SNORD3C-201ENST00000580533 CDCA8Q53HL2 280 aa16.45■□□□□ 0.22
SNORD3C-201ENST00000580533 ST20-MTHFSA0A0A6YYL1 179 aa16.44■□□□□ 0.22
SNORD3C-201ENST00000580533 HSPA5P11021 654 aaKnown RBP16.43■□□□□ 0.22
SNORD3C-201ENST00000580533 QRICH2Q9H0J4 1663 aa16.43■□□□□ 0.22
SNORD3C-201ENST00000580533 MSH6P52701 1360 aa16.42■□□□□ 0.22
SNORD3C-201ENST00000580533 TMEM94Q12767 1356 aa16.42■□□□□ 0.22
SNORD3C-201ENST00000580533 TMF1P82094 1093 aa16.42■□□□□ 0.22
SNORD3C-201ENST00000580533 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms