RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 SLIT1O75093 1534 aa4.14□□□□□ -1.75
CTC1-207ENST00000580299 SYCP2Q9BX26 1530 aa4.14□□□□□ -1.75
CTC1-207ENST00000580299 GPATCH8Q9UKJ3 1502 aaKnown RBP4.14□□□□□ -1.75
CTC1-207ENST00000580299 MROH1Q8NDA8 1641 aa4.13□□□□□ -1.75
CTC1-207ENST00000580299 CAPN15O75808 1086 aa4.13□□□□□ -1.75
CTC1-207ENST00000580299 EID1Q9Y6B2 187 aa4.13□□□□□ -1.75
CTC1-207ENST00000580299 ADGRB2O60241 1585 aa4.13□□□□□ -1.75
CTC1-207ENST00000580299 KCNA6P17658 529 aa4.12□□□□□ -1.75
CTC1-207ENST00000580299 DEFB132Q7Z7B7 95 aa4.12□□□□□ -1.75
CTC1-207ENST00000580299 C14orf37Q86TY3 774 aa4.12□□□□□ -1.75
CTC1-207ENST00000580299 USP21Q9UK80 565 aa4.12□□□□□ -1.75
CTC1-207ENST00000580299 RTEL1-TNFRSF6BF6WH68 1400 aa4.12□□□□□ -1.75
CTC1-207ENST00000580299 ATRNO75882 1429 aa4.12□□□□□ -1.75
CTC1-207ENST00000580299 TROQ12816 1431 aaPredicted RBP4.12□□□□□ -1.75
CTC1-207ENST00000580299 SETD5Q9C0A6 1442 aa4.12□□□□□ -1.75
CTC1-207ENST00000580299 NCOA2Q15596 1464 aa4.11□□□□□ -1.75
CTC1-207ENST00000580299 PLEKHH2Q8IVE3 1493 aa4.11□□□□□ -1.75
CTC1-207ENST00000580299 R3HDM1Q15032 1099 aaKnown RBP4.11□□□□□ -1.75
CTC1-207ENST00000580299 FBXO31Q5XUX0 539 aaPredicted RBP4.11□□□□□ -1.75
CTC1-207ENST00000580299 TXNDC2Q86VQ3 553 aa4.11□□□□□ -1.75
CTC1-207ENST00000580299 CEP152O94986 1710 aa4.11□□□□□ -1.75
CTC1-207ENST00000580299 TNS1Q9HBL0 1735 aaKnown RBP4.11□□□□□ -1.75
CTC1-207ENST00000580299 PTCH1Q13635 1447 aa4.11□□□□□ -1.75
CTC1-207ENST00000580299 RALGAPBQ86X10 1494 aa4.11□□□□□ -1.75
CTC1-207ENST00000580299 ASXL1Q8IXJ9 1541 aa4.11□□□□□ -1.75
CTC1-207ENST00000580299 PIK3C2BO00750 1634 aa4.1□□□□□ -1.75
CTC1-207ENST00000580299 NALCNQ8IZF0 1738 aa4.1□□□□□ -1.75
CTC1-207ENST00000580299 ADAMTS2O95450 1211 aa4.1□□□□□ -1.75
CTC1-207ENST00000580299 ATF3P18847 181 aa4.1□□□□□ -1.75
CTC1-207ENST00000580299 CADPS2Q86UW7 1296 aa4.1□□□□□ -1.75
CTC1-207ENST00000580299 LRRC59Q96AG4 307 aaKnown RBP4.1□□□□□ -1.75
CTC1-207ENST00000580299 WASHC2CQ9Y4E1 1318 aa4.1□□□□□ -1.75
CTC1-207ENST00000580299 NCOA3Q9Y6Q9 1424 aa4.1□□□□□ -1.75
CTC1-207ENST00000580299 ERVK-7P63135 1459 aa4.1□□□□□ -1.75
CTC1-207ENST00000580299 MAST1Q9Y2H9 1570 aa4.1□□□□□ -1.75
CTC1-207ENST00000580299 RREB1Q92766 1687 aa4.1□□□□□ -1.75
CTC1-207ENST00000580299 LRRIQ1Q96JM4 1722 aa4.09□□□□□ -1.75
CTC1-207ENST00000580299 PRELPP51888 382 aa4.09□□□□□ -1.75
CTC1-207ENST00000580299 PNPLA6Q8IY17 1366 aa4.09□□□□□ -1.75
CTC1-207ENST00000580299 PRXQ9BXM0 1461 aa4.09□□□□□ -1.75
CTC1-207ENST00000580299 COL22A1Q8NFW1 1626 aaPredicted RBP4.09□□□□□ -1.76
CTC1-207ENST00000580299 TET3O43151 1660 aa4.08□□□□□ -1.76
CTC1-207ENST00000580299 GLI3P10071 1580 aa4.08□□□□□ -1.76
CTC1-207ENST00000580299 CAMSAP2Q08AD1 1489 aa4.08□□□□□ -1.76
CTC1-207ENST00000580299 NUP188Q5SRE5 1749 aa4.08□□□□□ -1.76
CTC1-207ENST00000580299 ATP1B4Q9UN42 357 aaPredicted RBP4.08□□□□□ -1.76
CTC1-207ENST00000580299 PTPN23Q9H3S7 1636 aa4.07□□□□□ -1.76
CTC1-207ENST00000580299 EFCAB6Q5THR3 1501 aa4.07□□□□□ -1.76
CTC1-207ENST00000580299 RPRD2Q5VT52 1461 aaKnown RBP4.07□□□□□ -1.76
CTC1-207ENST00000580299 TNS4Q8IZW8 715 aa4.07□□□□□ -1.76
CTC1-207ENST00000580299 BCANQ96GW7 911 aa4.07□□□□□ -1.76
CTC1-207ENST00000580299 SPON1Q9HCB6 807 aa4.07□□□□□ -1.76
CTC1-207ENST00000580299 ZNF777Q9ULD5 760 aaPredicted RBP4.07□□□□□ -1.76
CTC1-207ENST00000580299 NWD2Q9ULI1 1742 aa4.07□□□□□ -1.76
CTC1-207ENST00000580299 MYOM1P52179 1685 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 LAMC1P11047 1609 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 EIF2AK4Q9P2K8 1649 aaKnown RBP4.06□□□□□ -1.76
CTC1-207ENST00000580299 NRKQ7Z2Y5 1582 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 DLC1Q96QB1 1528 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 ARHGAP35Q9NRY4 1499 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 DCCP43146 1447 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 FMN1Q68DA7 1419 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 KIAA1107Q9UPP5 1409 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 KIF3BO15066 747 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 LTKP29376 864 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 BRINP3Q76B58 766 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 FNBP4Q8N3X1 1017 aaPredicted RBP4.06□□□□□ -1.76
CTC1-207ENST00000580299 GJD4Q96KN9 370 aaPredicted RBP4.06□□□□□ -1.76
CTC1-207ENST00000580299 STAG3Q9UJ98 1225 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 MYO5BQ9ULV0 1848 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 SHANK3Q9BYB0 1731 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 PLCH1Q4KWH8 1693 aa4.06□□□□□ -1.76
CTC1-207ENST00000580299 CCDC18Q5T9S5 1454 aa4.05□□□□□ -1.76
CTC1-207ENST00000580299 DISP2A7MBM2 1401 aa4.05□□□□□ -1.76
CTC1-207ENST00000580299 DHX29Q7Z478 1369 aaKnown RBP4.05□□□□□ -1.76
CTC1-207ENST00000580299 PARD3Q8TEW0 1356 aa4.05□□□□□ -1.76
CTC1-207ENST00000580299 TMEM2Q9UHN6 1383 aa4.05□□□□□ -1.76
CTC1-207ENST00000580299 SUPT5HO00267 1087 aaKnown RBP4.05□□□□□ -1.76
CTC1-207ENST00000580299 HSPA6P17066 643 aa4.05□□□□□ -1.76
CTC1-207ENST00000580299 RANGAP1P46060 587 aaPredicted RBP4.05□□□□□ -1.76
CTC1-207ENST00000580299 SLC26A8Q96RN1 970 aa4.05□□□□□ -1.76
CTC1-207ENST00000580299 C19orf44Q9H6X5 657 aa4.05□□□□□ -1.76
CTC1-207ENST00000580299 AATKQ6ZMQ8 1374 aa4.04□□□□□ -1.76
CTC1-207ENST00000580299 A0A0G2JS52 829 aa4.04□□□□□ -1.76
CTC1-207ENST00000580299 KCNQ2O43526 872 aa4.04□□□□□ -1.76
CTC1-207ENST00000580299 PPP1R15AO75807 674 aaPredicted RBP4.04□□□□□ -1.76
CTC1-207ENST00000580299 HNRNPMP52272 730 aaKnown RBP eCLIP4.04□□□□□ -1.76
CTC1-207ENST00000580299 MYT1Q01538 1121 aa4.04□□□□□ -1.76
CTC1-207ENST00000580299 EN1Q05925 392 aaPredicted RBP4.04□□□□□ -1.76
CTC1-207ENST00000580299 NBPF8Q3BBV2 869 aa4.04□□□□□ -1.76
CTC1-207ENST00000580299 NBPF14Q5TI25 921 aa4.04□□□□□ -1.76
CTC1-207ENST00000580299 KRT27Q7Z3Y8 459 aa4.04□□□□□ -1.76
CTC1-207ENST00000580299 ADGRB3O60242 1522 aa4.04□□□□□ -1.76
CTC1-207ENST00000580299 FYCO1Q9BQS8 1478 aa4.04□□□□□ -1.76
CTC1-207ENST00000580299 WDR90Q96KV7 1748 aa4.04□□□□□ -1.76
CTC1-207ENST00000580299 FAM83GA6ND36 823 aa4.03□□□□□ -1.76
CTC1-207ENST00000580299 SEPT12Q8IYM1 358 aa4.03□□□□□ -1.76
CTC1-207ENST00000580299 EHBP1L1Q8N3D4 1523 aa4.03□□□□□ -1.76
CTC1-207ENST00000580299 CASZ1Q86V15 1759 aa4.03□□□□□ -1.76
CTC1-207ENST00000580299 GCC2Q8IWJ2 1684 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms