RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 MPHOSPH9Q99550 1183 aa27.83■■■□□ 2.05
PPP4R1-215ENST00000580182 SENP3Q9H4L4 574 aaPredicted RBP27.83■■■□□ 2.05
PPP4R1-215ENST00000580182 NUTM2DQ5VT03 806 aaPredicted RBP27.8■■■□□ 2.04
PPP4R1-215ENST00000580182 SLC26A8Q96RN1 970 aa27.77■■■□□ 2.04
PPP4R1-215ENST00000580182 STRCP1A6NGW2 1772 aa27.76■■■□□ 2.03
PPP4R1-215ENST00000580182 PPP1R15AO75807 674 aaPredicted RBP27.76■■■□□ 2.03
PPP4R1-215ENST00000580182 HDGFP51858 240 aaKnown RBP27.74■■■□□ 2.03
PPP4R1-215ENST00000580182 BCANQ96GW7 911 aa27.74■■■□□ 2.03
PPP4R1-215ENST00000580182 CPS1P31327 1500 aa27.73■■■□□ 2.03
PPP4R1-215ENST00000580182 ZNF326Q5BKZ1 582 aaKnown RBP27.73■■■□□ 2.03
PPP4R1-215ENST00000580182 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.73■■■□□ 2.03
PPP4R1-215ENST00000580182 PLEKHG1Q9ULL1 1385 aa27.73■■■□□ 2.03
PPP4R1-215ENST00000580182 ACIN1Q9UKV3 1341 aaKnown RBP27.71■■■□□ 2.03
PPP4R1-215ENST00000580182 IQSEC2Q5JU85 1478 aa27.71■■■□□ 2.03
PPP4R1-215ENST00000580182 KIF1BO60333 1816 aa27.7■■■□□ 2.02
PPP4R1-215ENST00000580182 NEXMIFQ5QGS0 1516 aa27.64■■■□□ 2.02
PPP4R1-215ENST00000580182 LRRC7Q96NW7 1537 aa27.64■■■□□ 2.02
PPP4R1-215ENST00000580182 HRCP23327 699 aa27.64■■■□□ 2.02
PPP4R1-215ENST00000580182 ADAMTS13Q76LX8 1427 aa27.63■■■□□ 2.01
PPP4R1-215ENST00000580182 CCDC144AA2RUR9 1427 aa27.62■■■□□ 2.01
PPP4R1-215ENST00000580182 KCNA6P17658 529 aa27.61■■■□□ 2.01
PPP4R1-215ENST00000580182 TBX22Q9Y458 520 aa27.6■■■□□ 2.01
PPP4R1-215ENST00000580182 UBAP1LF5GYI3 381 aa27.59■■■□□ 2.01
PPP4R1-215ENST00000580182 NRXN3Q9Y4C0 1643 aa27.56■■■□□ 2
PPP4R1-215ENST00000580182 RGL3Q3MIN7 710 aa27.55■■■□□ 2
PPP4R1-215ENST00000580182 NWD1Q149M9 1564 aa27.55■■■□□ 2
PPP4R1-215ENST00000580182 SPATA31E1Q6ZUB1 1445 aa27.54■■■□□ 2
PPP4R1-215ENST00000580182 RBM33Q96EV2 1170 aaKnown RBP27.54■■■□□ 2
PPP4R1-215ENST00000580182 CHD2O14647 1828 aaKnown RBP27.53■■■□□ 2
PPP4R1-215ENST00000580182 DIP2AQ14689 1571 aa27.53■■■□□ 2
PPP4R1-215ENST00000580182 SETBP1Q9Y6X0 1596 aa27.53■■■□□ 2
PPP4R1-215ENST00000580182 RPGRIP1LQ68CZ1 1315 aa27.53■■■□□ 2
PPP4R1-215ENST00000580182 XIRP1Q702N8 1843 aaKnown RBP27.53■■■□□ 2
PPP4R1-215ENST00000580182 PPLO60437 1756 aa27.5■■□□□ 1.99
PPP4R1-215ENST00000580182 ANKRD30BQ9BXX2 1392 aa27.5■■□□□ 1.99
PPP4R1-215ENST00000580182 VGFO15240 615 aaPredicted RBP27.5■■□□□ 1.99
PPP4R1-215ENST00000580182 PROSER2Q86WR7 435 aaPredicted RBP27.5■■□□□ 1.99
PPP4R1-215ENST00000580182 TMEM94Q12767 1356 aa27.49■■□□□ 1.99
PPP4R1-215ENST00000580182 NKTRP30414 1462 aaKnown RBP27.48■■□□□ 1.99
PPP4R1-215ENST00000580182 PTPRUQ92729 1446 aa27.48■■□□□ 1.99
PPP4R1-215ENST00000580182 ALKQ9UM73 1620 aa27.48■■□□□ 1.99
PPP4R1-215ENST00000580182 METP08581 1390 aa27.47■■□□□ 1.99
PPP4R1-215ENST00000580182 TOM1O60784 492 aa27.46■■□□□ 1.99
PPP4R1-215ENST00000580182 PIK3R4Q99570 1358 aa27.46■■□□□ 1.99
PPP4R1-215ENST00000580182 PIP4K2BP78356 416 aa27.45■■□□□ 1.98
PPP4R1-215ENST00000580182 AMOTL2Q9Y2J4 779 aa27.45■■□□□ 1.98
PPP4R1-215ENST00000580182 ADGRF5Q8IZF2 1346 aa27.43■■□□□ 1.98
PPP4R1-215ENST00000580182 SCAF1Q9H7N4 1312 aaKnown RBP27.42■■□□□ 1.98
PPP4R1-215ENST00000580182 IFT172Q9UG01 1749 aa27.42■■□□□ 1.98
PPP4R1-215ENST00000580182 TRIM26Q12899 539 aaPredicted RBP27.4■■□□□ 1.98
PPP4R1-215ENST00000580182 SETD1AO15047 1707 aaKnown RBP27.38■■□□□ 1.97
PPP4R1-215ENST00000580182 XRN1Q8IZH2 1706 aaKnown RBP27.37■■□□□ 1.97
PPP4R1-215ENST00000580182 MSH6P52701 1360 aa27.31■■□□□ 1.96
PPP4R1-215ENST00000580182 C14orf37Q86TY3 774 aa27.3■■□□□ 1.96
PPP4R1-215ENST00000580182 PIK3C2GO75747 1445 aa27.3■■□□□ 1.96
PPP4R1-215ENST00000580182 NCOA3Q9Y6Q9 1424 aa27.29■■□□□ 1.96
PPP4R1-215ENST00000580182 HSPA1LP34931 641 aa27.28■■□□□ 1.96
PPP4R1-215ENST00000580182 MYOM2P54296 1465 aa27.27■■□□□ 1.96
PPP4R1-215ENST00000580182 NRXN1Q9ULB1 1477 aa27.26■■□□□ 1.95
PPP4R1-215ENST00000580182 KDM2AQ9Y2K7 1162 aa27.25■■□□□ 1.95
PPP4R1-215ENST00000580182 TMEM132EQ6IEE7 984 aa27.24■■□□□ 1.95
PPP4R1-215ENST00000580182 DCAF11Q8TEB1 546 aa27.24■■□□□ 1.95
PPP4R1-215ENST00000580182 ASXL1Q8IXJ9 1541 aa27.24■■□□□ 1.95
PPP4R1-215ENST00000580182 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.24■■□□□ 1.95
PPP4R1-215ENST00000580182 DHX57Q6P158 1386 aaKnown RBP27.23■■□□□ 1.95
PPP4R1-215ENST00000580182 ROBO2Q9HCK4 1378 aa27.23■■□□□ 1.95
PPP4R1-215ENST00000580182 C19orf44Q9H6X5 657 aa27.23■■□□□ 1.95
PPP4R1-215ENST00000580182 CFAP70Q5T0N1 1121 aa27.22■■□□□ 1.95
PPP4R1-215ENST00000580182 C14orf93Q9H972 538 aaKnown RBP27.21■■□□□ 1.95
PPP4R1-215ENST00000580182 PTCH1Q13635 1447 aa27.2■■□□□ 1.94
PPP4R1-215ENST00000580182 SLAIN2Q9P270 581 aa27.2■■□□□ 1.94
PPP4R1-215ENST00000580182 STK26Q9P289 416 aa27.2■■□□□ 1.94
PPP4R1-215ENST00000580182 FAM135BQ49AJ0 1406 aa27.18■■□□□ 1.94
PPP4R1-215ENST00000580182 PRAG1Q86YV5 1406 aa27.18■■□□□ 1.94
PPP4R1-215ENST00000580182 ATF3P18847 181 aa27.17■■□□□ 1.94
PPP4R1-215ENST00000580182 SIN3AQ96ST3 1273 aa27.17■■□□□ 1.94
PPP4R1-215ENST00000580182 ROBO1Q9Y6N7 1651 aa27.17■■□□□ 1.94
PPP4R1-215ENST00000580182 CADPS2Q86UW7 1296 aa27.16■■□□□ 1.94
PPP4R1-215ENST00000580182 LRPPRCP42704 1394 aaKnown RBP27.16■■□□□ 1.94
PPP4R1-215ENST00000580182 NALCNQ8IZF0 1738 aa27.16■■□□□ 1.94
PPP4R1-215ENST00000580182 ADGRL3Q9HAR2 1447 aa27.16■■□□□ 1.94
PPP4R1-215ENST00000580182 YTHDC2Q9H6S0 1430 aaKnown RBP27.14■■□□□ 1.93
PPP4R1-215ENST00000580182 LAMC1P11047 1609 aa27.13■■□□□ 1.93
PPP4R1-215ENST00000580182 ABCC11Q96J66 1382 aa27.12■■□□□ 1.93
PPP4R1-215ENST00000580182 WAPLQ7Z5K2 1190 aa27.12■■□□□ 1.93
PPP4R1-215ENST00000580182 TECPR2O15040 1411 aa27.12■■□□□ 1.93
PPP4R1-215ENST00000580182 DCCP43146 1447 aa27.11■■□□□ 1.93
PPP4R1-215ENST00000580182 STAC3Q96MF2 364 aa27.1■■□□□ 1.93
PPP4R1-215ENST00000580182 PLEKHH1Q9ULM0 1364 aa27.09■■□□□ 1.93
PPP4R1-215ENST00000580182 NEUROD1Q13562 356 aa27.09■■□□□ 1.93
PPP4R1-215ENST00000580182 KNDC1Q76NI1 1749 aa27.09■■□□□ 1.93
PPP4R1-215ENST00000580182 MST1RQ04912 1400 aa27.07■■□□□ 1.92
PPP4R1-215ENST00000580182 ADGRB1O14514 1584 aa27.07■■□□□ 1.92
PPP4R1-215ENST00000580182 BRINP3Q76B58 766 aa27.03■■□□□ 1.92
PPP4R1-215ENST00000580182 L3MBTL2Q969R5 705 aa27.03■■□□□ 1.92
PPP4R1-215ENST00000580182 PCGF6Q9BYE7 350 aa27.01■■□□□ 1.91
PPP4R1-215ENST00000580182 SIRT1Q96EB6 747 aa27■■□□□ 1.91
PPP4R1-215ENST00000580182 TRAK1Q9UPV9 953 aa27■■□□□ 1.91
PPP4R1-215ENST00000580182 PHLPP1O60346 1717 aa26.99■■□□□ 1.91
PPP4R1-215ENST00000580182 PRAM1Q96QH2 718 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms