RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 CERKQ8TCT0 537 aa27.72■■■□□ 2.03
NEK4P2-201ENST00000580004 RIMS2Q9UQ26 1411 aa27.72■■■□□ 2.03
NEK4P2-201ENST00000580004 CHGAP10645 457 aaKnown RBP27.7■■■□□ 2.02
NEK4P2-201ENST00000580004 CPS1P31327 1500 aa27.69■■■□□ 2.02
NEK4P2-201ENST00000580004 ZNF335Q9H4Z2 1342 aaPredicted RBP27.68■■■□□ 2.02
NEK4P2-201ENST00000580004 PLEKHG1Q9ULL1 1385 aa27.68■■■□□ 2.02
NEK4P2-201ENST00000580004 CCDC144AA2RUR9 1427 aa27.64■■■□□ 2.02
NEK4P2-201ENST00000580004 PPP1R15AO75807 674 aaPredicted RBP27.62■■■□□ 2.01
NEK4P2-201ENST00000580004 DIP2AQ14689 1571 aa27.6■■■□□ 2.01
NEK4P2-201ENST00000580004 FBXO41Q8TF61 875 aa27.6■■■□□ 2.01
NEK4P2-201ENST00000580004 NEXMIFQ5QGS0 1516 aa27.59■■■□□ 2.01
NEK4P2-201ENST00000580004 FOXD1Q16676 465 aa27.59■■■□□ 2.01
NEK4P2-201ENST00000580004 RPGRIP1LQ68CZ1 1315 aa27.58■■■□□ 2.01
NEK4P2-201ENST00000580004 STRCP1A6NGW2 1772 aa27.58■■■□□ 2
NEK4P2-201ENST00000580004 ZNF326Q5BKZ1 582 aaKnown RBP27.57■■■□□ 2
NEK4P2-201ENST00000580004 TBX22Q9Y458 520 aa27.54■■■□□ 2
NEK4P2-201ENST00000580004 SETBP1Q9Y6X0 1596 aa27.54■■■□□ 2
NEK4P2-201ENST00000580004 PPLO60437 1756 aa27.53■■■□□ 2
NEK4P2-201ENST00000580004 NWD1Q149M9 1564 aa27.52■■■□□ 2
NEK4P2-201ENST00000580004 BCANQ96GW7 911 aa27.52■■■□□ 2
NEK4P2-201ENST00000580004 SPATA31E1Q6ZUB1 1445 aa27.51■■□□□ 1.99
NEK4P2-201ENST00000580004 PIK3R4Q99570 1358 aa27.51■■□□□ 1.99
NEK4P2-201ENST00000580004 CHD2O14647 1828 aaKnown RBP27.51■■□□□ 1.99
NEK4P2-201ENST00000580004 TRIM26Q12899 539 aaPredicted RBP27.51■■□□□ 1.99
NEK4P2-201ENST00000580004 SLC26A8Q96RN1 970 aa27.51■■□□□ 1.99
NEK4P2-201ENST00000580004 ADAMTS13Q76LX8 1427 aa27.5■■□□□ 1.99
NEK4P2-201ENST00000580004 ANKRD30BQ9BXX2 1392 aa27.49■■□□□ 1.99
NEK4P2-201ENST00000580004 VGFO15240 615 aaPredicted RBP27.49■■□□□ 1.99
NEK4P2-201ENST00000580004 KCNA6P17658 529 aa27.49■■□□□ 1.99
NEK4P2-201ENST00000580004 NRXN3Q9Y4C0 1643 aa27.49■■□□□ 1.99
NEK4P2-201ENST00000580004 NKTRP30414 1462 aaKnown RBP27.48■■□□□ 1.99
NEK4P2-201ENST00000580004 LRRC7Q96NW7 1537 aa27.47■■□□□ 1.99
NEK4P2-201ENST00000580004 ILDR1Q86SU0 546 aaPredicted RBP27.47■■□□□ 1.99
NEK4P2-201ENST00000580004 IFT172Q9UG01 1749 aa27.47■■□□□ 1.99
NEK4P2-201ENST00000580004 NUTM2DQ5VT03 806 aaPredicted RBP27.46■■□□□ 1.99
NEK4P2-201ENST00000580004 XIRP1Q702N8 1843 aaKnown RBP27.4■■□□□ 1.98
NEK4P2-201ENST00000580004 SETD1AO15047 1707 aaKnown RBP27.36■■□□□ 1.97
NEK4P2-201ENST00000580004 NCOA3Q9Y6Q9 1424 aa27.35■■□□□ 1.97
NEK4P2-201ENST00000580004 RGL3Q3MIN7 710 aa27.35■■□□□ 1.97
NEK4P2-201ENST00000580004 XRN1Q8IZH2 1706 aaKnown RBP27.34■■□□□ 1.97
NEK4P2-201ENST00000580004 MYOM2P54296 1465 aa27.33■■□□□ 1.97
NEK4P2-201ENST00000580004 ALKQ9UM73 1620 aa27.33■■□□□ 1.97
NEK4P2-201ENST00000580004 TOM1O60784 492 aa27.32■■□□□ 1.96
NEK4P2-201ENST00000580004 SENP3Q9H4L4 574 aaPredicted RBP27.32■■□□□ 1.96
NEK4P2-201ENST00000580004 TMEM94Q12767 1356 aa27.32■■□□□ 1.96
NEK4P2-201ENST00000580004 UBAP1LF5GYI3 381 aa27.31■■□□□ 1.96
NEK4P2-201ENST00000580004 PROSER2Q86WR7 435 aaPredicted RBP27.31■■□□□ 1.96
NEK4P2-201ENST00000580004 STAC3Q96MF2 364 aa27.31■■□□□ 1.96
NEK4P2-201ENST00000580004 NRXN1Q9ULB1 1477 aa27.3■■□□□ 1.96
NEK4P2-201ENST00000580004 METP08581 1390 aa27.29■■□□□ 1.96
NEK4P2-201ENST00000580004 PIK3C2GO75747 1445 aa27.29■■□□□ 1.96
NEK4P2-201ENST00000580004 PTPRUQ92729 1446 aa27.29■■□□□ 1.96
NEK4P2-201ENST00000580004 PRAG1Q86YV5 1406 aa27.28■■□□□ 1.96
NEK4P2-201ENST00000580004 AMOTL2Q9Y2J4 779 aa27.28■■□□□ 1.96
NEK4P2-201ENST00000580004 LAMC1P11047 1609 aa27.27■■□□□ 1.96
NEK4P2-201ENST00000580004 ADGRF5Q8IZF2 1346 aa27.27■■□□□ 1.96
NEK4P2-201ENST00000580004 PTCH1Q13635 1447 aa27.22■■□□□ 1.95
NEK4P2-201ENST00000580004 MSH6P52701 1360 aa27.22■■□□□ 1.95
NEK4P2-201ENST00000580004 DHX57Q6P158 1386 aaKnown RBP27.2■■□□□ 1.94
NEK4P2-201ENST00000580004 KNDC1Q76NI1 1749 aa27.16■■□□□ 1.94
NEK4P2-201ENST00000580004 DCCP43146 1447 aa27.16■■□□□ 1.94
NEK4P2-201ENST00000580004 C19orf44Q9H6X5 657 aa27.15■■□□□ 1.94
NEK4P2-201ENST00000580004 C14orf93Q9H972 538 aaKnown RBP27.15■■□□□ 1.94
NEK4P2-201ENST00000580004 TECPR2O15040 1411 aa27.15■■□□□ 1.94
NEK4P2-201ENST00000580004 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.14■■□□□ 1.94
NEK4P2-201ENST00000580004 DCAF11Q8TEB1 546 aa27.13■■□□□ 1.93
NEK4P2-201ENST00000580004 ASXL1Q8IXJ9 1541 aa27.12■■□□□ 1.93
NEK4P2-201ENST00000580004 RBM33Q96EV2 1170 aaKnown RBP27.12■■□□□ 1.93
NEK4P2-201ENST00000580004 LRPPRCP42704 1394 aaKnown RBP27.11■■□□□ 1.93
NEK4P2-201ENST00000580004 C14orf37Q86TY3 774 aa27.11■■□□□ 1.93
NEK4P2-201ENST00000580004 ABCC11Q96J66 1382 aa27.1■■□□□ 1.93
NEK4P2-201ENST00000580004 PIP4K2BP78356 416 aa27.1■■□□□ 1.93
NEK4P2-201ENST00000580004 FAM135BQ49AJ0 1406 aa27.09■■□□□ 1.93
NEK4P2-201ENST00000580004 ADGRL3Q9HAR2 1447 aa27.09■■□□□ 1.93
NEK4P2-201ENST00000580004 CADPS2Q86UW7 1296 aa27.09■■□□□ 1.93
NEK4P2-201ENST00000580004 SCAF1Q9H7N4 1312 aaKnown RBP27.08■■□□□ 1.93
NEK4P2-201ENST00000580004 ROBO2Q9HCK4 1378 aa27.08■■□□□ 1.93
NEK4P2-201ENST00000580004 YTHDC2Q9H6S0 1430 aaKnown RBP27.07■■□□□ 1.92
NEK4P2-201ENST00000580004 NALCNQ8IZF0 1738 aa27.07■■□□□ 1.92
NEK4P2-201ENST00000580004 KIAA1210Q9ULL0 1709 aa27.07■■□□□ 1.92
NEK4P2-201ENST00000580004 ATF3P18847 181 aa27.05■■□□□ 1.92
NEK4P2-201ENST00000580004 CFAP70Q5T0N1 1121 aa27.05■■□□□ 1.92
NEK4P2-201ENST00000580004 SIRT1Q96EB6 747 aa27.05■■□□□ 1.92
NEK4P2-201ENST00000580004 KDM2AQ9Y2K7 1162 aa27.05■■□□□ 1.92
NEK4P2-201ENST00000580004 ADGRB1O14514 1584 aa27.05■■□□□ 1.92
NEK4P2-201ENST00000580004 SLAIN2Q9P270 581 aa27.04■■□□□ 1.92
NEK4P2-201ENST00000580004 ROBO1Q9Y6N7 1651 aa27.03■■□□□ 1.92
NEK4P2-201ENST00000580004 DLC1Q96QB1 1528 aa27.02■■□□□ 1.92
NEK4P2-201ENST00000580004 TMEM132EQ6IEE7 984 aa27.02■■□□□ 1.92
NEK4P2-201ENST00000580004 SIN3AQ96ST3 1273 aa26.98■■□□□ 1.91
NEK4P2-201ENST00000580004 CDC42BPGQ6DT37 1551 aa26.97■■□□□ 1.91
NEK4P2-201ENST00000580004 STK26Q9P289 416 aa26.97■■□□□ 1.91
NEK4P2-201ENST00000580004 HSPA1LP34931 641 aa26.96■■□□□ 1.91
NEK4P2-201ENST00000580004 PCGF6Q9BYE7 350 aa26.96■■□□□ 1.91
NEK4P2-201ENST00000580004 L3MBTL2Q969R5 705 aa26.95■■□□□ 1.9
NEK4P2-201ENST00000580004 MST1RQ04912 1400 aa26.95■■□□□ 1.9
NEK4P2-201ENST00000580004 NEUROD1Q13562 356 aa26.93■■□□□ 1.9
NEK4P2-201ENST00000580004 CLSPNQ9HAW4 1339 aa26.9■■□□□ 1.9
NEK4P2-201ENST00000580004 AHDC1Q5TGY3 1603 aaPredicted RBP26.88■■□□□ 1.89
NEK4P2-201ENST00000580004 WAPLQ7Z5K2 1190 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms