RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 POLR3GLQ9BT43 218 aa28.17■■■□□ 2.1
SMG8-203ENST00000578922 PIK3C2BO00750 1634 aa28.17■■■□□ 2.1
SMG8-203ENST00000578922 ERVK-7P63135 1459 aa28.14■■■□□ 2.1
SMG8-203ENST00000578922 SLC52A1Q9NWF4 448 aa28.14■■■□□ 2.09
SMG8-203ENST00000578922 NUTM2DQ5VT03 806 aaPredicted RBP28.13■■■□□ 2.09
SMG8-203ENST00000578922 IFT172Q9UG01 1749 aa28.13■■■□□ 2.09
SMG8-203ENST00000578922 MYOM2P54296 1465 aa28.13■■■□□ 2.09
SMG8-203ENST00000578922 CFAP70Q5T0N1 1121 aa28.11■■■□□ 2.09
SMG8-203ENST00000578922 LAMC1P11047 1609 aa28.09■■■□□ 2.09
SMG8-203ENST00000578922 ZMYM3Q14202 1370 aa28.08■■■□□ 2.09
SMG8-203ENST00000578922 PPLO60437 1756 aa28.07■■■□□ 2.08
SMG8-203ENST00000578922 POLR1AO95602 1720 aaPredicted RBP28.07■■■□□ 2.08
SMG8-203ENST00000578922 RPGRIP1LQ68CZ1 1315 aa28.06■■■□□ 2.08
SMG8-203ENST00000578922 SENP3Q9H4L4 574 aaPredicted RBP28.05■■■□□ 2.08
SMG8-203ENST00000578922 ANP32CO43423 234 aa28.04■■■□□ 2.08
SMG8-203ENST00000578922 STAG3Q9UJ98 1225 aa28.04■■■□□ 2.08
SMG8-203ENST00000578922 MYO5BQ9ULV0 1848 aa28.04■■■□□ 2.08
SMG8-203ENST00000578922 NRXN1Q9ULB1 1477 aa28.03■■■□□ 2.08
SMG8-203ENST00000578922 SPATA31D1Q6ZQQ2 1576 aa28.02■■■□□ 2.08
SMG8-203ENST00000578922 TMEM131LA2VDJ0 1609 aa28.01■■■□□ 2.07
SMG8-203ENST00000578922 NEXMIFQ5QGS0 1516 aa28.01■■■□□ 2.07
SMG8-203ENST00000578922 KIAA1210Q9ULL0 1709 aa27.99■■■□□ 2.07
SMG8-203ENST00000578922 PIK3C2GO75747 1445 aa27.99■■■□□ 2.07
SMG8-203ENST00000578922 SCAF11Q99590 1463 aaKnown RBP27.98■■■□□ 2.07
SMG8-203ENST00000578922 VGFO15240 615 aaPredicted RBP27.98■■■□□ 2.07
SMG8-203ENST00000578922 TESK2Q96S53 571 aa27.98■■■□□ 2.07
SMG8-203ENST00000578922 PLPPR3Q6T4P5 718 aa27.97■■■□□ 2.07
SMG8-203ENST00000578922 IQGAP1P46940 1657 aa27.97■■■□□ 2.07
SMG8-203ENST00000578922 CEBPAP49715 358 aaPredicted RBP27.94■■■□□ 2.06
SMG8-203ENST00000578922 C14orf93Q9H972 538 aaKnown RBP27.93■■■□□ 2.06
SMG8-203ENST00000578922 DISP3Q9P2K9 1392 aa27.93■■■□□ 2.06
SMG8-203ENST00000578922 TMEM132EQ6IEE7 984 aa27.93■■■□□ 2.06
SMG8-203ENST00000578922 TNRQ92752 1358 aa27.9■■■□□ 2.06
SMG8-203ENST00000578922 TMF1P82094 1093 aa27.89■■■□□ 2.05
SMG8-203ENST00000578922 A2ML1A8K2U0 1454 aa27.88■■■□□ 2.05
SMG8-203ENST00000578922 CNGB1Q14028 1251 aaPredicted RBP27.88■■■□□ 2.05
SMG8-203ENST00000578922 EIF3AQ14152 1382 aaKnown RBP27.88■■■□□ 2.05
SMG8-203ENST00000578922 TRAK1Q9UPV9 953 aa27.87■■■□□ 2.05
SMG8-203ENST00000578922 FER1L4A9Z1Z3 1794 aa27.85■■■□□ 2.05
SMG8-203ENST00000578922 SETBP1Q9Y6X0 1596 aa27.84■■■□□ 2.05
SMG8-203ENST00000578922 ZFYVE9O95405 1425 aa27.84■■■□□ 2.05
SMG8-203ENST00000578922 ADGRB1O14514 1584 aa27.83■■■□□ 2.05
SMG8-203ENST00000578922 SUPT16HQ9Y5B9 1047 aaKnown RBP27.83■■■□□ 2.05
SMG8-203ENST00000578922 RIMS2Q9UQ26 1411 aa27.81■■■□□ 2.04
SMG8-203ENST00000578922 CCER2I3L3R5 266 aa27.79■■■□□ 2.04
SMG8-203ENST00000578922 C3P01024 1663 aa27.79■■■□□ 2.04
SMG8-203ENST00000578922 PRKRIP1Q9H875 184 aaPredicted RBP27.77■■■□□ 2.04
SMG8-203ENST00000578922 MYT1Q01538 1121 aa27.77■■■□□ 2.04
SMG8-203ENST00000578922 STK26Q9P289 416 aa27.76■■■□□ 2.03
SMG8-203ENST00000578922 CENPJQ9HC77 1338 aaPredicted RBP27.75■■■□□ 2.03
SMG8-203ENST00000578922 ASXL1Q8IXJ9 1541 aa27.72■■■□□ 2.03
SMG8-203ENST00000578922 UBR1Q8IWV7 1749 aa27.7■■■□□ 2.02
SMG8-203ENST00000578922 ALKQ9UM73 1620 aa27.7■■■□□ 2.02
SMG8-203ENST00000578922 CDCA8Q53HL2 280 aa27.69■■■□□ 2.02
SMG8-203ENST00000578922 MYO3AQ8NEV4 1616 aa27.69■■■□□ 2.02
SMG8-203ENST00000578922 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.69■■■□□ 2.02
SMG8-203ENST00000578922 PANK3Q9H999 370 aa27.69■■■□□ 2.02
SMG8-203ENST00000578922 SAFB2Q14151 953 aaKnown RBP eCLIP27.68■■■□□ 2.02
SMG8-203ENST00000578922 NLRP1Q9C000 1473 aa27.68■■■□□ 2.02
SMG8-203ENST00000578922 RIMS1Q86UR5 1692 aaKnown RBP27.67■■■□□ 2.02
SMG8-203ENST00000578922 CCDC184Q52MB2 194 aa27.66■■■□□ 2.02
SMG8-203ENST00000578922 BCANQ96GW7 911 aa27.66■■■□□ 2.02
SMG8-203ENST00000578922 TMEM2Q9UHN6 1383 aa27.66■■■□□ 2.02
SMG8-203ENST00000578922 QRICH2Q9H0J4 1663 aa27.66■■■□□ 2.02
SMG8-203ENST00000578922 ARHGEF28Q8N1W1 1705 aaKnown RBP27.64■■■□□ 2.02
SMG8-203ENST00000578922 HDGFP51858 240 aaKnown RBP27.63■■■□□ 2.01
SMG8-203ENST00000578922 YTHDC2Q9H6S0 1430 aaKnown RBP27.63■■■□□ 2.01
SMG8-203ENST00000578922 SLC24A1O60721 1099 aa27.62■■■□□ 2.01
SMG8-203ENST00000578922 PTPRMP28827 1452 aa27.62■■■□□ 2.01
SMG8-203ENST00000578922 SBNO2Q9Y2G9 1366 aa27.62■■■□□ 2.01
SMG8-203ENST00000578922 KDM5AP29375 1690 aaKnown RBP27.62■■■□□ 2.01
SMG8-203ENST00000578922 PER1O15534 1290 aaPredicted RBP27.61■■■□□ 2.01
SMG8-203ENST00000578922 LTKP29376 864 aa27.59■■■□□ 2.01
SMG8-203ENST00000578922 PRAM1Q96QH2 718 aa27.59■■■□□ 2.01
SMG8-203ENST00000578922 NRXN3Q9Y4C0 1643 aa27.58■■■□□ 2.01
SMG8-203ENST00000578922 MRS2Q9HD23 443 aa27.58■■■□□ 2
SMG8-203ENST00000578922 TXNDC2Q86VQ3 553 aa27.57■■■□□ 2
SMG8-203ENST00000578922 POGKQ9P215 609 aa27.57■■■□□ 2
SMG8-203ENST00000578922 ADAMTSL3P82987 1691 aa27.56■■■□□ 2
SMG8-203ENST00000578922 MYOM1P52179 1685 aa27.55■■■□□ 2
SMG8-203ENST00000578922 CC2D1BQ5T0F9 858 aaKnown RBP27.55■■■□□ 2
SMG8-203ENST00000578922 METP08581 1390 aa27.55■■■□□ 2
SMG8-203ENST00000578922 SETD1AO15047 1707 aaKnown RBP27.55■■■□□ 2
SMG8-203ENST00000578922 MINK1Q8N4C8 1332 aaPredicted RBP27.53■■■□□ 2
SMG8-203ENST00000578922 EID1Q9Y6B2 187 aa27.52■■■□□ 2
SMG8-203ENST00000578922 THEMISQ8N1K5 641 aaPredicted RBP27.52■■■□□ 2
SMG8-203ENST00000578922 KTN1Q86UP2 1357 aaKnown RBP27.52■■■□□ 2
SMG8-203ENST00000578922 TMC1Q8TDI8 760 aa27.51■■□□□ 1.99
SMG8-203ENST00000578922 EVC2Q86UK5 1308 aa27.51■■□□□ 1.99
SMG8-203ENST00000578922 LRPPRCP42704 1394 aaKnown RBP27.5■■□□□ 1.99
SMG8-203ENST00000578922 WAPLQ7Z5K2 1190 aa27.5■■□□□ 1.99
SMG8-203ENST00000578922 KNSTRNQ9Y448 316 aa27.5■■□□□ 1.99
SMG8-203ENST00000578922 TULP4Q9NRJ4 1543 aa27.5■■□□□ 1.99
SMG8-203ENST00000578922 CABP2Q9NPB3 220 aa27.49■■□□□ 1.99
SMG8-203ENST00000578922 RALBP1Q15311 655 aa27.48■■□□□ 1.99
SMG8-203ENST00000578922 FAM9BQ8IZU0 186 aa27.48■■□□□ 1.99
SMG8-203ENST00000578922 PLEKHG1Q9ULL1 1385 aa27.47■■□□□ 1.99
SMG8-203ENST00000578922 SLC26A8Q96RN1 970 aa27.47■■□□□ 1.99
SMG8-203ENST00000578922 PLEKHH1Q9ULM0 1364 aa27.46■■□□□ 1.99
SMG8-203ENST00000578922 SLIT1O75093 1534 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms