RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 PPLO60437 1756 aa16.34■□□□□ 0.21
CDK5RAP3-210ENST00000578733 THEMISQ8N1K5 641 aaPredicted RBP16.34■□□□□ 0.21
CDK5RAP3-210ENST00000578733 UBAP1LF5GYI3 381 aa16.32■□□□□ 0.2
CDK5RAP3-210ENST00000578733 HDGFP51858 240 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-210ENST00000578733 ZNF326Q5BKZ1 582 aaKnown RBP16.32■□□□□ 0.2
CDK5RAP3-210ENST00000578733 NEUROD1Q13562 356 aa16.3■□□□□ 0.2
CDK5RAP3-210ENST00000578733 SLIT1O75093 1534 aa16.29■□□□□ 0.2
CDK5RAP3-210ENST00000578733 SPATA31E1Q6ZUB1 1445 aa16.29■□□□□ 0.2
CDK5RAP3-210ENST00000578733 TONSLQ96HA7 1378 aa16.28■□□□□ 0.2
CDK5RAP3-210ENST00000578733 RPGRIP1LQ68CZ1 1315 aa16.28■□□□□ 0.2
CDK5RAP3-210ENST00000578733 ZNF335Q9H4Z2 1342 aaPredicted RBP16.28■□□□□ 0.2
CDK5RAP3-210ENST00000578733 SIN3AQ96ST3 1273 aa16.28■□□□□ 0.2
CDK5RAP3-210ENST00000578733 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.2
CDK5RAP3-210ENST00000578733 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
CDK5RAP3-210ENST00000578733 EID1Q9Y6B2 187 aa16.27■□□□□ 0.2
CDK5RAP3-210ENST00000578733 NEXMIFQ5QGS0 1516 aa16.27■□□□□ 0.2
CDK5RAP3-210ENST00000578733 TMEM2Q9UHN6 1383 aa16.26■□□□□ 0.19
CDK5RAP3-210ENST00000578733 RGL3Q3MIN7 710 aa16.26■□□□□ 0.19
CDK5RAP3-210ENST00000578733 STAC3Q96MF2 364 aa16.26■□□□□ 0.19
CDK5RAP3-210ENST00000578733 ARHGAP23Q9P227 1491 aa16.25■□□□□ 0.19
CDK5RAP3-210ENST00000578733 TIMELESSQ9UNS1 1208 aa16.25■□□□□ 0.19
CDK5RAP3-210ENST00000578733 RIMS2Q9UQ26 1411 aa16.25■□□□□ 0.19
CDK5RAP3-210ENST00000578733 PPP1R15AO75807 674 aaPredicted RBP16.24■□□□□ 0.19
CDK5RAP3-210ENST00000578733 ANKLE2Q86XL3 938 aa16.23■□□□□ 0.19
CDK5RAP3-210ENST00000578733 MYOM2P54296 1465 aa16.22■□□□□ 0.19
CDK5RAP3-210ENST00000578733 SCAF11Q99590 1463 aaKnown RBP16.22■□□□□ 0.19
CDK5RAP3-210ENST00000578733 ZFYVE9O95405 1425 aa16.22■□□□□ 0.19
CDK5RAP3-210ENST00000578733 IQGAP1P46940 1657 aa16.22■□□□□ 0.19
CDK5RAP3-210ENST00000578733 VGFO15240 615 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP3-210ENST00000578733 LAMC1P11047 1609 aa16.22■□□□□ 0.19
CDK5RAP3-210ENST00000578733 TXNDC2Q86VQ3 553 aa16.2■□□□□ 0.18
CDK5RAP3-210ENST00000578733 DCAF11Q8TEB1 546 aa16.2■□□□□ 0.18
CDK5RAP3-210ENST00000578733 MED1Q15648 1581 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-210ENST00000578733 KIAA1210Q9ULL0 1709 aa16.19■□□□□ 0.18
CDK5RAP3-210ENST00000578733 CPS1P31327 1500 aa16.19■□□□□ 0.18
CDK5RAP3-210ENST00000578733 TOM1O60784 492 aa16.18■□□□□ 0.18
CDK5RAP3-210ENST00000578733 DIP2AQ14689 1571 aa16.17■□□□□ 0.18
CDK5RAP3-210ENST00000578733 PLEKHG1Q9ULL1 1385 aa16.17■□□□□ 0.18
CDK5RAP3-210ENST00000578733 L3MBTL2Q969R5 705 aa16.17■□□□□ 0.18
CDK5RAP3-210ENST00000578733 BCANQ96GW7 911 aa16.17■□□□□ 0.18
CDK5RAP3-210ENST00000578733 SETBP1Q9Y6X0 1596 aa16.17■□□□□ 0.18
CDK5RAP3-210ENST00000578733 MED14O60244 1454 aa16.16■□□□□ 0.18
CDK5RAP3-210ENST00000578733 NPHP4O75161 1426 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP3-210ENST00000578733 HSPA1LP34931 641 aa16.15■□□□□ 0.18
CDK5RAP3-210ENST00000578733 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
CDK5RAP3-210ENST00000578733 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP3-210ENST00000578733 NUTM2DQ5VT03 806 aaPredicted RBP16.14■□□□□ 0.17
CDK5RAP3-210ENST00000578733 NRXN1Q9ULB1 1477 aa16.14■□□□□ 0.17
CDK5RAP3-210ENST00000578733 TRPM1Q7Z4N2 1603 aa16.13■□□□□ 0.17
CDK5RAP3-210ENST00000578733 NRXN3Q9Y4C0 1643 aa16.13■□□□□ 0.17
CDK5RAP3-210ENST00000578733 LTKP29376 864 aa16.13■□□□□ 0.17
CDK5RAP3-210ENST00000578733 ZEB1P37275 1124 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP3-210ENST00000578733 PIK3C2GO75747 1445 aa16.12■□□□□ 0.17
CDK5RAP3-210ENST00000578733 SETD1AO15047 1707 aaKnown RBP16.12■□□□□ 0.17
CDK5RAP3-210ENST00000578733 PRAG1Q86YV5 1406 aa16.11■□□□□ 0.17
CDK5RAP3-210ENST00000578733 PIP4K2BP78356 416 aa16.11■□□□□ 0.17
CDK5RAP3-210ENST00000578733 ADGRF5Q8IZF2 1346 aa16.11■□□□□ 0.17
CDK5RAP3-210ENST00000578733 ALKQ9UM73 1620 aa16.11■□□□□ 0.17
CDK5RAP3-210ENST00000578733 PHF23Q9BUL5 403 aaPredicted RBP16.1■□□□□ 0.17
CDK5RAP3-210ENST00000578733 CHD2O14647 1828 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP3-210ENST00000578733 KNDC1Q76NI1 1749 aa16.06■□□□□ 0.16
CDK5RAP3-210ENST00000578733 PIK3R4Q99570 1358 aa16.06■□□□□ 0.16
CDK5RAP3-210ENST00000578733 TBX22Q9Y458 520 aa16.06■□□□□ 0.16
CDK5RAP3-210ENST00000578733 ADAMTS13Q76LX8 1427 aa16.05■□□□□ 0.16
CDK5RAP3-210ENST00000578733 C14orf93Q9H972 538 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-210ENST00000578733 RALGAPBQ86X10 1494 aa16.04■□□□□ 0.16
CDK5RAP3-210ENST00000578733 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-210ENST00000578733 SLC26A8Q96RN1 970 aa16.03■□□□□ 0.16
CDK5RAP3-210ENST00000578733 ROCK2O75116 1388 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-210ENST00000578733 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.16
CDK5RAP3-210ENST00000578733 NWD1Q149M9 1564 aa16.01■□□□□ 0.15
CDK5RAP3-210ENST00000578733 XRN1Q8IZH2 1706 aaKnown RBP16■□□□□ 0.15
CDK5RAP3-210ENST00000578733 ADGRB1O14514 1584 aa16■□□□□ 0.15
CDK5RAP3-210ENST00000578733 ARHGEF28Q8N1W1 1705 aaKnown RBP15.99■□□□□ 0.15
CDK5RAP3-210ENST00000578733 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
CDK5RAP3-210ENST00000578733 NBPF8Q3BBV2 869 aa15.99■□□□□ 0.15
CDK5RAP3-210ENST00000578733 YTHDC2Q9H6S0 1430 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-210ENST00000578733 EIF3AQ14152 1382 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP3-210ENST00000578733 STRCP1A6NGW2 1772 aa15.98■□□□□ 0.15
CDK5RAP3-210ENST00000578733 CARD11Q9BXL7 1154 aa15.97■□□□□ 0.15
CDK5RAP3-210ENST00000578733 METP08581 1390 aa15.97■□□□□ 0.15
CDK5RAP3-210ENST00000578733 GPRASP1Q5JY77 1395 aa15.97■□□□□ 0.15
CDK5RAP3-210ENST00000578733 NKTRP30414 1462 aaKnown RBP15.97■□□□□ 0.15
CDK5RAP3-210ENST00000578733 DLC1Q96QB1 1528 aa15.96■□□□□ 0.15
CDK5RAP3-210ENST00000578733 KCNA6P17658 529 aa15.96■□□□□ 0.15
CDK5RAP3-210ENST00000578733 LRPPRCP42704 1394 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP3-210ENST00000578733 TMEM132EQ6IEE7 984 aa15.95■□□□□ 0.14
CDK5RAP3-210ENST00000578733 PTCH1Q13635 1447 aa15.94■□□□□ 0.14
CDK5RAP3-210ENST00000578733 AMOTL2Q9Y2J4 779 aa15.94■□□□□ 0.14
CDK5RAP3-210ENST00000578733 ABCC11Q96J66 1382 aa15.94■□□□□ 0.14
CDK5RAP3-210ENST00000578733 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
CDK5RAP3-210ENST00000578733 TECPR2O15040 1411 aa15.94■□□□□ 0.14
CDK5RAP3-210ENST00000578733 QRICH2Q9H0J4 1663 aa15.93■□□□□ 0.14
CDK5RAP3-210ENST00000578733 NBPF1Q3BBV0 1214 aa15.93■□□□□ 0.14
CDK5RAP3-210ENST00000578733 STK26Q9P289 416 aa15.93■□□□□ 0.14
CDK5RAP3-210ENST00000578733 PTPRUQ92729 1446 aa15.92■□□□□ 0.14
CDK5RAP3-210ENST00000578733 SIRT1Q96EB6 747 aa15.91■□□□□ 0.14
CDK5RAP3-210ENST00000578733 TRAK1Q9UPV9 953 aa15.91■□□□□ 0.14
CDK5RAP3-210ENST00000578733 FAM135BQ49AJ0 1406 aa15.91■□□□□ 0.14
CDK5RAP3-210ENST00000578733 XIRP1Q702N8 1843 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms