RNA–Protein interactions for RNA: ENST00000578537.1

CTC1-205, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-205ENST00000578537 IQSEC2Q5JU85 1478 aa18.82■□□□□ 0.6
CTC1-205ENST00000578537 SLC52A1Q9NWF4 448 aa18.8■□□□□ 0.6
CTC1-205ENST00000578537 TONSLQ96HA7 1378 aa18.8■□□□□ 0.6
CTC1-205ENST00000578537 L3MBTL2Q969R5 705 aa18.79■□□□□ 0.6
CTC1-205ENST00000578537 ZFYVE9O95405 1425 aa18.78■□□□□ 0.6
CTC1-205ENST00000578537 CHGAP10645 457 aaKnown RBP18.78■□□□□ 0.6
CTC1-205ENST00000578537 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
CTC1-205ENST00000578537 IQGAP1P46940 1657 aa18.77■□□□□ 0.6
CTC1-205ENST00000578537 NRXN3Q9Y4C0 1643 aa18.77■□□□□ 0.6
CTC1-205ENST00000578537 ARHGAP23Q9P227 1491 aa18.77■□□□□ 0.59
CTC1-205ENST00000578537 TRPM1Q7Z4N2 1603 aa18.76■□□□□ 0.59
CTC1-205ENST00000578537 SETD1AO15047 1707 aaKnown RBP18.76■□□□□ 0.59
CTC1-205ENST00000578537 POLR1AO95602 1720 aaPredicted RBP18.76■□□□□ 0.59
CTC1-205ENST00000578537 MYOM2P54296 1465 aa18.76■□□□□ 0.59
CTC1-205ENST00000578537 SLIT1O75093 1534 aa18.75■□□□□ 0.59
CTC1-205ENST00000578537 NRXN1Q9ULB1 1477 aa18.74■□□□□ 0.59
CTC1-205ENST00000578537 RIMS2Q9UQ26 1411 aa18.73■□□□□ 0.59
CTC1-205ENST00000578537 NBPF8Q3BBV2 869 aa18.71■□□□□ 0.59
CTC1-205ENST00000578537 PRAG1Q86YV5 1406 aa18.71■□□□□ 0.59
CTC1-205ENST00000578537 NUTM2DQ5VT03 806 aaPredicted RBP18.7■□□□□ 0.58
CTC1-205ENST00000578537 ASXL1Q8IXJ9 1541 aa18.69■□□□□ 0.58
CTC1-205ENST00000578537 TMEM2Q9UHN6 1383 aa18.69■□□□□ 0.58
CTC1-205ENST00000578537 ZNF326Q5BKZ1 582 aaKnown RBP18.69■□□□□ 0.58
CTC1-205ENST00000578537 DCAF11Q8TEB1 546 aa18.69■□□□□ 0.58
CTC1-205ENST00000578537 ADGRF5Q8IZF2 1346 aa18.69■□□□□ 0.58
CTC1-205ENST00000578537 KIAA1210Q9ULL0 1709 aa18.69■□□□□ 0.58
CTC1-205ENST00000578537 KDM2AQ9Y2K7 1162 aa18.68■□□□□ 0.58
CTC1-205ENST00000578537 PIK3C2GO75747 1445 aa18.67■□□□□ 0.58
CTC1-205ENST00000578537 PPP1R15AO75807 674 aaPredicted RBP18.67■□□□□ 0.58
CTC1-205ENST00000578537 STAG3Q9UJ98 1225 aa18.67■□□□□ 0.58
CTC1-205ENST00000578537 SETBP1Q9Y6X0 1596 aa18.66■□□□□ 0.58
CTC1-205ENST00000578537 LAMC1P11047 1609 aa18.65■□□□□ 0.58
CTC1-205ENST00000578537 TIMELESSQ9UNS1 1208 aa18.65■□□□□ 0.58
CTC1-205ENST00000578537 RALGAPBQ86X10 1494 aa18.65■□□□□ 0.58
CTC1-205ENST00000578537 SCAF11Q99590 1463 aaKnown RBP18.65■□□□□ 0.58
CTC1-205ENST00000578537 LTKP29376 864 aa18.64■□□□□ 0.57
CTC1-205ENST00000578537 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
CTC1-205ENST00000578537 RPGRIP1LQ68CZ1 1315 aa18.64■□□□□ 0.57
CTC1-205ENST00000578537 UBAP1LF5GYI3 381 aa18.63■□□□□ 0.57
CTC1-205ENST00000578537 ZNF335Q9H4Z2 1342 aaPredicted RBP18.63■□□□□ 0.57
CTC1-205ENST00000578537 NCKAP5LQ9HCH0 1330 aa18.63■□□□□ 0.57
CTC1-205ENST00000578537 ALKQ9UM73 1620 aa18.63■□□□□ 0.57
CTC1-205ENST00000578537 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
CTC1-205ENST00000578537 ADAMTS13Q76LX8 1427 aa18.6■□□□□ 0.57
CTC1-205ENST00000578537 ZEB1P37275 1124 aaPredicted RBP18.6■□□□□ 0.57
CTC1-205ENST00000578537 THEMISQ8N1K5 641 aaPredicted RBP18.58■□□□□ 0.56
CTC1-205ENST00000578537 MED14O60244 1454 aa18.58■□□□□ 0.56
CTC1-205ENST00000578537 PLEKHG1Q9ULL1 1385 aa18.57■□□□□ 0.56
CTC1-205ENST00000578537 ARHGEF28Q8N1W1 1705 aaKnown RBP18.57■□□□□ 0.56
CTC1-205ENST00000578537 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
CTC1-205ENST00000578537 CFAP70Q5T0N1 1121 aa18.55■□□□□ 0.56
CTC1-205ENST00000578537 TXNDC2Q86VQ3 553 aa18.55■□□□□ 0.56
CTC1-205ENST00000578537 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
CTC1-205ENST00000578537 DIP2AQ14689 1571 aa18.54■□□□□ 0.56
CTC1-205ENST00000578537 GPRASP1Q5JY77 1395 aa18.54■□□□□ 0.56
CTC1-205ENST00000578537 STRCP1A6NGW2 1772 aa18.53■□□□□ 0.56
CTC1-205ENST00000578537 VGFO15240 615 aaPredicted RBP18.53■□□□□ 0.56
CTC1-205ENST00000578537 XRN1Q8IZH2 1706 aaKnown RBP18.53■□□□□ 0.56
CTC1-205ENST00000578537 NPHP4O75161 1426 aaPredicted RBP18.52■□□□□ 0.56
CTC1-205ENST00000578537 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.52■□□□□ 0.56
CTC1-205ENST00000578537 MED1Q15648 1581 aaPredicted RBP18.51■□□□□ 0.55
CTC1-205ENST00000578537 CHD2O14647 1828 aaKnown RBP18.51■□□□□ 0.55
CTC1-205ENST00000578537 STAC3Q96MF2 364 aa18.5■□□□□ 0.55
CTC1-205ENST00000578537 C14orf93Q9H972 538 aaKnown RBP18.5■□□□□ 0.55
CTC1-205ENST00000578537 METP08581 1390 aa18.5■□□□□ 0.55
CTC1-205ENST00000578537 PTPRUQ92729 1446 aa18.49■□□□□ 0.55
CTC1-205ENST00000578537 ROCK2O75116 1388 aaKnown RBP18.49■□□□□ 0.55
CTC1-205ENST00000578537 ANKLE2Q86XL3 938 aa18.48■□□□□ 0.55
CTC1-205ENST00000578537 EID1Q9Y6B2 187 aa18.48■□□□□ 0.55
CTC1-205ENST00000578537 HSPA1LP34931 641 aa18.47■□□□□ 0.55
CTC1-205ENST00000578537 TMEM132EQ6IEE7 984 aa18.47■□□□□ 0.55
CTC1-205ENST00000578537 SLC26A8Q96RN1 970 aa18.47■□□□□ 0.55
CTC1-205ENST00000578537 QRICH2Q9H0J4 1663 aa18.47■□□□□ 0.55
CTC1-205ENST00000578537 NWD1Q149M9 1564 aa18.47■□□□□ 0.55
CTC1-205ENST00000578537 CPS1P31327 1500 aa18.46■□□□□ 0.55
CTC1-205ENST00000578537 YTHDC2Q9H6S0 1430 aaKnown RBP18.44■□□□□ 0.54
CTC1-205ENST00000578537 HDGFP51858 240 aaKnown RBP18.43■□□□□ 0.54
CTC1-205ENST00000578537 PIP4K2BP78356 416 aa18.43■□□□□ 0.54
CTC1-205ENST00000578537 SCAF1Q9H7N4 1312 aaKnown RBP18.43■□□□□ 0.54
CTC1-205ENST00000578537 USP47Q96K76 1375 aa18.42■□□□□ 0.54
CTC1-205ENST00000578537 TOM1O60784 492 aa18.42■□□□□ 0.54
CTC1-205ENST00000578537 DLC1Q96QB1 1528 aa18.41■□□□□ 0.54
CTC1-205ENST00000578537 BCANQ96GW7 911 aa18.41■□□□□ 0.54
CTC1-205ENST00000578537 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
CTC1-205ENST00000578537 TECPR2O15040 1411 aa18.4■□□□□ 0.54
CTC1-205ENST00000578537 XIRP1Q702N8 1843 aaKnown RBP18.4■□□□□ 0.54
CTC1-205ENST00000578537 LRPPRCP42704 1394 aaKnown RBP18.4■□□□□ 0.54
CTC1-205ENST00000578537 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
CTC1-205ENST00000578537 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.39■□□□□ 0.53
CTC1-205ENST00000578537 NALCNQ8IZF0 1738 aa18.38■□□□□ 0.53
CTC1-205ENST00000578537 HIRIP3Q9BW71 556 aaPredicted RBP18.38■□□□□ 0.53
CTC1-205ENST00000578537 PLEKHH1Q9ULM0 1364 aa18.38■□□□□ 0.53
CTC1-205ENST00000578537 HSPA5P11021 654 aaKnown RBP18.37■□□□□ 0.53
CTC1-205ENST00000578537 ROBO2Q9HCK4 1378 aa18.36■□□□□ 0.53
CTC1-205ENST00000578537 STK26Q9P289 416 aa18.36■□□□□ 0.53
CTC1-205ENST00000578537 TRAK1Q9UPV9 953 aa18.36■□□□□ 0.53
CTC1-205ENST00000578537 ABCC11Q96J66 1382 aa18.34■□□□□ 0.53
CTC1-205ENST00000578537 TULP4Q9NRJ4 1543 aa18.33■□□□□ 0.53
CTC1-205ENST00000578537 PTCH1Q13635 1447 aa18.33■□□□□ 0.53
CTC1-205ENST00000578537 PIK3R4Q99570 1358 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms