RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 ZFYVE9O95405 1425 aa18.73■□□□□ 0.59
CDK5RAP3-203ENST00000577442 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.72■□□□□ 0.59
CDK5RAP3-203ENST00000577442 LTKP29376 864 aa18.71■□□□□ 0.59
CDK5RAP3-203ENST00000577442 PPP1R15AO75807 674 aaPredicted RBP18.7■□□□□ 0.58
CDK5RAP3-203ENST00000577442 ZNF326Q5BKZ1 582 aaKnown RBP18.69■□□□□ 0.58
CDK5RAP3-203ENST00000577442 PLEKHG1Q9ULL1 1385 aa18.67■□□□□ 0.58
CDK5RAP3-203ENST00000577442 ANKRD30BQ9BXX2 1392 aa18.65■□□□□ 0.58
CDK5RAP3-203ENST00000577442 NEXMIFQ5QGS0 1516 aa18.64■□□□□ 0.58
CDK5RAP3-203ENST00000577442 RPGRIP1LQ68CZ1 1315 aa18.64■□□□□ 0.57
CDK5RAP3-203ENST00000577442 BCANQ96GW7 911 aa18.63■□□□□ 0.57
CDK5RAP3-203ENST00000577442 ZNF335Q9H4Z2 1342 aaPredicted RBP18.62■□□□□ 0.57
CDK5RAP3-203ENST00000577442 SPATA31E1Q6ZUB1 1445 aa18.62■□□□□ 0.57
CDK5RAP3-203ENST00000577442 DIP2AQ14689 1571 aa18.62■□□□□ 0.57
CDK5RAP3-203ENST00000577442 LTBP4Q8N2S1 1624 aa18.62■□□□□ 0.57
CDK5RAP3-203ENST00000577442 PPLO60437 1756 aa18.6■□□□□ 0.57
CDK5RAP3-203ENST00000577442 CPS1P31327 1500 aa18.6■□□□□ 0.57
CDK5RAP3-203ENST00000577442 NUTM2DQ5VT03 806 aaPredicted RBP18.59■□□□□ 0.57
CDK5RAP3-203ENST00000577442 SETBP1Q9Y6X0 1596 aa18.59■□□□□ 0.57
CDK5RAP3-203ENST00000577442 VGFO15240 615 aaPredicted RBP18.58■□□□□ 0.56
CDK5RAP3-203ENST00000577442 IQSEC2Q5JU85 1478 aa18.57■□□□□ 0.56
CDK5RAP3-203ENST00000577442 CERKQ8TCT0 537 aa18.56■□□□□ 0.56
CDK5RAP3-203ENST00000577442 SLC26A8Q96RN1 970 aa18.56■□□□□ 0.56
CDK5RAP3-203ENST00000577442 IFT172Q9UG01 1749 aa18.56■□□□□ 0.56
CDK5RAP3-203ENST00000577442 ADAMTS13Q76LX8 1427 aa18.56■□□□□ 0.56
CDK5RAP3-203ENST00000577442 RGL3Q3MIN7 710 aa18.55■□□□□ 0.56
CDK5RAP3-203ENST00000577442 TBX22Q9Y458 520 aa18.55■□□□□ 0.56
CDK5RAP3-203ENST00000577442 NRXN3Q9Y4C0 1643 aa18.54■□□□□ 0.56
CDK5RAP3-203ENST00000577442 DHX57Q6P158 1386 aaKnown RBP18.54■□□□□ 0.56
CDK5RAP3-203ENST00000577442 PIK3R4Q99570 1358 aa18.54■□□□□ 0.56
CDK5RAP3-203ENST00000577442 NWD1Q149M9 1564 aa18.53■□□□□ 0.56
CDK5RAP3-203ENST00000577442 STRCP1A6NGW2 1772 aa18.53■□□□□ 0.56
CDK5RAP3-203ENST00000577442 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
CDK5RAP3-203ENST00000577442 NKTRP30414 1462 aaKnown RBP18.52■□□□□ 0.55
CDK5RAP3-203ENST00000577442 KCNA6P17658 529 aa18.51■□□□□ 0.55
CDK5RAP3-203ENST00000577442 PCGF6Q9BYE7 350 aa18.51■□□□□ 0.55
CDK5RAP3-203ENST00000577442 MYOM2P54296 1465 aa18.51■□□□□ 0.55
CDK5RAP3-203ENST00000577442 CHD2O14647 1828 aaKnown RBP18.51■□□□□ 0.55
CDK5RAP3-203ENST00000577442 STAC3Q96MF2 364 aa18.47■□□□□ 0.55
CDK5RAP3-203ENST00000577442 LRRC7Q96NW7 1537 aa18.47■□□□□ 0.55
CDK5RAP3-203ENST00000577442 ALKQ9UM73 1620 aa18.46■□□□□ 0.55
CDK5RAP3-203ENST00000577442 PIK3C2GO75747 1445 aa18.46■□□□□ 0.55
CDK5RAP3-203ENST00000577442 ADGRF5Q8IZF2 1346 aa18.46■□□□□ 0.55
CDK5RAP3-203ENST00000577442 SETD1AO15047 1707 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-203ENST00000577442 NRXN1Q9ULB1 1477 aa18.46■□□□□ 0.54
CDK5RAP3-203ENST00000577442 LAMC1P11047 1609 aa18.45■□□□□ 0.54
CDK5RAP3-203ENST00000577442 XRN1Q8IZH2 1706 aaKnown RBP18.44■□□□□ 0.54
CDK5RAP3-203ENST00000577442 FBXO41Q8TF61 875 aa18.43■□□□□ 0.54
CDK5RAP3-203ENST00000577442 METP08581 1390 aa18.42■□□□□ 0.54
CDK5RAP3-203ENST00000577442 PROSER2Q86WR7 435 aaPredicted RBP18.41■□□□□ 0.54
CDK5RAP3-203ENST00000577442 AMOTL2Q9Y2J4 779 aa18.41■□□□□ 0.54
CDK5RAP3-203ENST00000577442 TMEM94Q12767 1356 aa18.41■□□□□ 0.54
CDK5RAP3-203ENST00000577442 PTPRUQ92729 1446 aa18.4■□□□□ 0.54
CDK5RAP3-203ENST00000577442 DCAF11Q8TEB1 546 aa18.4■□□□□ 0.54
CDK5RAP3-203ENST00000577442 XIRP1Q702N8 1843 aaKnown RBP18.39■□□□□ 0.54
CDK5RAP3-203ENST00000577442 PRAG1Q86YV5 1406 aa18.39■□□□□ 0.53
CDK5RAP3-203ENST00000577442 NCOA3Q9Y6Q9 1424 aa18.39■□□□□ 0.53
CDK5RAP3-203ENST00000577442 PTCH1Q13635 1447 aa18.38■□□□□ 0.53
CDK5RAP3-203ENST00000577442 SIN3AQ96ST3 1273 aa18.37■□□□□ 0.53
CDK5RAP3-203ENST00000577442 KDM2AQ9Y2K7 1162 aa18.37■□□□□ 0.53
CDK5RAP3-203ENST00000577442 UBAP1LF5GYI3 381 aa18.36■□□□□ 0.53
CDK5RAP3-203ENST00000577442 NEUROD1Q13562 356 aa18.36■□□□□ 0.53
CDK5RAP3-203ENST00000577442 C14orf93Q9H972 538 aaKnown RBP18.36■□□□□ 0.53
CDK5RAP3-203ENST00000577442 ASXL1Q8IXJ9 1541 aa18.35■□□□□ 0.53
CDK5RAP3-203ENST00000577442 MSH6P52701 1360 aa18.35■□□□□ 0.53
CDK5RAP3-203ENST00000577442 TOM1O60784 492 aa18.35■□□□□ 0.53
CDK5RAP3-203ENST00000577442 LRPPRCP42704 1394 aaKnown RBP18.34■□□□□ 0.53
CDK5RAP3-203ENST00000577442 KNDC1Q76NI1 1749 aa18.34■□□□□ 0.53
CDK5RAP3-203ENST00000577442 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.53
CDK5RAP3-203ENST00000577442 C14orf37Q86TY3 774 aa18.33■□□□□ 0.52
CDK5RAP3-203ENST00000577442 TECPR2O15040 1411 aa18.32■□□□□ 0.52
CDK5RAP3-203ENST00000577442 KIAA1210Q9ULL0 1709 aa18.32■□□□□ 0.52
CDK5RAP3-203ENST00000577442 CFAP70Q5T0N1 1121 aa18.32■□□□□ 0.52
CDK5RAP3-203ENST00000577442 YTHDC2Q9H6S0 1430 aaKnown RBP18.32■□□□□ 0.52
CDK5RAP3-203ENST00000577442 TONSLQ96HA7 1378 aa18.31■□□□□ 0.52
CDK5RAP3-203ENST00000577442 L3MBTL2Q969R5 705 aa18.31■□□□□ 0.52
CDK5RAP3-203ENST00000577442 ABCC11Q96J66 1382 aa18.3■□□□□ 0.52
CDK5RAP3-203ENST00000577442 ILDR1Q86SU0 546 aaPredicted RBP18.3■□□□□ 0.52
CDK5RAP3-203ENST00000577442 ROBO2Q9HCK4 1378 aa18.3■□□□□ 0.52
CDK5RAP3-203ENST00000577442 TMEM132EQ6IEE7 984 aa18.29■□□□□ 0.52
CDK5RAP3-203ENST00000577442 RBM33Q96EV2 1170 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-203ENST00000577442 DCCP43146 1447 aa18.29■□□□□ 0.52
CDK5RAP3-203ENST00000577442 ADGRL3Q9HAR2 1447 aa18.29■□□□□ 0.52
CDK5RAP3-203ENST00000577442 ADGRB1O14514 1584 aa18.29■□□□□ 0.52
CDK5RAP3-203ENST00000577442 C19orf44Q9H6X5 657 aa18.28■□□□□ 0.52
CDK5RAP3-203ENST00000577442 STK26Q9P289 416 aa18.27■□□□□ 0.52
CDK5RAP3-203ENST00000577442 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.26■□□□□ 0.51
CDK5RAP3-203ENST00000577442 FAM135BQ49AJ0 1406 aa18.26■□□□□ 0.51
CDK5RAP3-203ENST00000577442 DLC1Q96QB1 1528 aa18.26■□□□□ 0.51
CDK5RAP3-203ENST00000577442 NALCNQ8IZF0 1738 aa18.26■□□□□ 0.51
CDK5RAP3-203ENST00000577442 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
CDK5RAP3-203ENST00000577442 ATF3P18847 181 aa18.25■□□□□ 0.51
CDK5RAP3-203ENST00000577442 CADPS2Q86UW7 1296 aa18.25■□□□□ 0.51
CDK5RAP3-203ENST00000577442 SIRT1Q96EB6 747 aa18.24■□□□□ 0.51
CDK5RAP3-203ENST00000577442 PIP4K2BP78356 416 aa18.23■□□□□ 0.51
CDK5RAP3-203ENST00000577442 CCER1Q8TC90 406 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-203ENST00000577442 CDC42BPGQ6DT37 1551 aa18.21■□□□□ 0.51
CDK5RAP3-203ENST00000577442 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
CDK5RAP3-203ENST00000577442 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-203ENST00000577442 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
CDK5RAP3-203ENST00000577442 POGKQ9P215 609 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms