RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-223ENST00000575701 CLTCL1P53675 1640 aa37.69■■■■□ 3.62
SRRM2-223ENST00000575701 ILDR1Q86SU0 546 aaPredicted RBP37.68■■■■□ 3.62
SRRM2-223ENST00000575701 RAB3GAP2Q9H2M9 1393 aa37.68■■■■□ 3.62
SRRM2-223ENST00000575701 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.65■■■■□ 3.62
SRRM2-223ENST00000575701 MPHOSPH9Q99550 1183 aa37.63■■■■□ 3.61
SRRM2-223ENST00000575701 KIF1BO60333 1816 aa37.61■■■■□ 3.61
SRRM2-223ENST00000575701 PLEKHG1Q9ULL1 1385 aa37.61■■■■□ 3.61
SRRM2-223ENST00000575701 PPP1R15AO75807 674 aaPredicted RBP37.6■■■■□ 3.61
SRRM2-223ENST00000575701 HRCP23327 699 aa37.55■■■■□ 3.6
SRRM2-223ENST00000575701 STRCP1A6NGW2 1772 aa37.52■■■■□ 3.6
SRRM2-223ENST00000575701 FOXD1Q16676 465 aa37.5■■■■□ 3.59
SRRM2-223ENST00000575701 ZNF326Q5BKZ1 582 aaKnown RBP37.5■■■■□ 3.59
SRRM2-223ENST00000575701 BCANQ96GW7 911 aa37.5■■■■□ 3.59
SRRM2-223ENST00000575701 CCDC144AA2RUR9 1427 aa37.48■■■■□ 3.59
SRRM2-223ENST00000575701 DIP2AQ14689 1571 aa37.47■■■■□ 3.59
SRRM2-223ENST00000575701 SLC26A8Q96RN1 970 aa37.47■■■■□ 3.59
SRRM2-223ENST00000575701 NEXMIFQ5QGS0 1516 aa37.46■■■■□ 3.59
SRRM2-223ENST00000575701 LRRC7Q96NW7 1537 aa37.42■■■■□ 3.58
SRRM2-223ENST00000575701 NUTM2DQ5VT03 806 aaPredicted RBP37.42■■■■□ 3.58
SRRM2-223ENST00000575701 NWD1Q149M9 1564 aa37.42■■■■□ 3.58
SRRM2-223ENST00000575701 KCNA6P17658 529 aa37.4■■■■□ 3.58
SRRM2-223ENST00000575701 TBX22Q9Y458 520 aa37.4■■■■□ 3.58
SRRM2-223ENST00000575701 SETBP1Q9Y6X0 1596 aa37.39■■■■□ 3.58
SRRM2-223ENST00000575701 ADAMTS13Q76LX8 1427 aa37.39■■■■□ 3.58
SRRM2-223ENST00000575701 RPGRIP1LQ68CZ1 1315 aa37.38■■■■□ 3.58
SRRM2-223ENST00000575701 NKTRP30414 1462 aaKnown RBP37.37■■■■□ 3.57
SRRM2-223ENST00000575701 PIK3R4Q99570 1358 aa37.35■■■■□ 3.57
SRRM2-223ENST00000575701 CHD2O14647 1828 aaKnown RBP37.34■■■■□ 3.57
SRRM2-223ENST00000575701 NRXN3Q9Y4C0 1643 aa37.33■■■■□ 3.57
SRRM2-223ENST00000575701 SENP3Q9H4L4 574 aaPredicted RBP37.32■■■■□ 3.56
SRRM2-223ENST00000575701 PPLO60437 1756 aa37.32■■■■□ 3.56
SRRM2-223ENST00000575701 UBAP1LF5GYI3 381 aa37.31■■■■□ 3.56
SRRM2-223ENST00000575701 SPATA31E1Q6ZUB1 1445 aa37.3■■■■□ 3.56
SRRM2-223ENST00000575701 VGFO15240 615 aaPredicted RBP37.3■■■■□ 3.56
SRRM2-223ENST00000575701 TOM1O60784 492 aa37.26■■■■□ 3.56
SRRM2-223ENST00000575701 XIRP1Q702N8 1843 aaKnown RBP37.25■■■■□ 3.55
SRRM2-223ENST00000575701 ANKRD30BQ9BXX2 1392 aa37.22■■■■□ 3.55
SRRM2-223ENST00000575701 IFT172Q9UG01 1749 aa37.22■■■■□ 3.55
SRRM2-223ENST00000575701 TMEM94Q12767 1356 aa37.21■■■■□ 3.55
SRRM2-223ENST00000575701 PROSER2Q86WR7 435 aaPredicted RBP37.21■■■■□ 3.55
SRRM2-223ENST00000575701 RGL3Q3MIN7 710 aa37.17■■■■□ 3.54
SRRM2-223ENST00000575701 XRN1Q8IZH2 1706 aaKnown RBP37.14■■■■□ 3.54
SRRM2-223ENST00000575701 ALKQ9UM73 1620 aa37.14■■■■□ 3.54
SRRM2-223ENST00000575701 NCOA3Q9Y6Q9 1424 aa37.13■■■■□ 3.53
SRRM2-223ENST00000575701 PTPRUQ92729 1446 aa37.12■■■■□ 3.53
SRRM2-223ENST00000575701 SETD1AO15047 1707 aaKnown RBP37.12■■■■□ 3.53
SRRM2-223ENST00000575701 AMOTL2Q9Y2J4 779 aa37.11■■■■□ 3.53
SRRM2-223ENST00000575701 METP08581 1390 aa37.11■■■■□ 3.53
SRRM2-223ENST00000575701 TRIM26Q12899 539 aaPredicted RBP37.1■■■■□ 3.53
SRRM2-223ENST00000575701 MSH6P52701 1360 aa37.05■■■■□ 3.52
SRRM2-223ENST00000575701 MYOM2P54296 1465 aa37.05■■■■□ 3.52
SRRM2-223ENST00000575701 ADGRF5Q8IZF2 1346 aa37.05■■■■□ 3.52
SRRM2-223ENST00000575701 PIP4K2BP78356 416 aa37.04■■■■□ 3.52
SRRM2-223ENST00000575701 SCAF1Q9H7N4 1312 aaKnown RBP37.04■■■■□ 3.52
SRRM2-223ENST00000575701 RBM33Q96EV2 1170 aaKnown RBP37.02■■■■□ 3.52
SRRM2-223ENST00000575701 PIK3C2GO75747 1445 aa37.02■■■■□ 3.52
SRRM2-223ENST00000575701 PRAG1Q86YV5 1406 aa36.99■■■■□ 3.51
SRRM2-223ENST00000575701 NRXN1Q9ULB1 1477 aa36.98■■■■□ 3.51
SRRM2-223ENST00000575701 PTCH1Q13635 1447 aa36.95■■■■□ 3.51
SRRM2-223ENST00000575701 C14orf37Q86TY3 774 aa36.95■■■■□ 3.51
SRRM2-223ENST00000575701 LAMC1P11047 1609 aa36.95■■■■□ 3.51
SRRM2-223ENST00000575701 STAC3Q96MF2 364 aa36.92■■■■□ 3.5
SRRM2-223ENST00000575701 C19orf44Q9H6X5 657 aa36.91■■■■□ 3.5
SRRM2-223ENST00000575701 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.9■■■■□ 3.5
SRRM2-223ENST00000575701 DCCP43146 1447 aa36.89■■■■□ 3.5
SRRM2-223ENST00000575701 FAM135BQ49AJ0 1406 aa36.89■■■■□ 3.5
SRRM2-223ENST00000575701 CADPS2Q86UW7 1296 aa36.86■■■■□ 3.49
SRRM2-223ENST00000575701 ASXL1Q8IXJ9 1541 aa36.85■■■■□ 3.49
SRRM2-223ENST00000575701 C14orf93Q9H972 538 aaKnown RBP36.84■■■■□ 3.49
SRRM2-223ENST00000575701 ADGRL3Q9HAR2 1447 aa36.84■■■■□ 3.49
SRRM2-223ENST00000575701 ATF3P18847 181 aa36.83■■■■□ 3.49
SRRM2-223ENST00000575701 HSPA1LP34931 641 aa36.83■■■■□ 3.49
SRRM2-223ENST00000575701 KNDC1Q76NI1 1749 aa36.82■■■■□ 3.49
SRRM2-223ENST00000575701 LRPPRCP42704 1394 aaKnown RBP36.82■■■■□ 3.49
SRRM2-223ENST00000575701 ROBO2Q9HCK4 1378 aa36.82■■■■□ 3.49
SRRM2-223ENST00000575701 DCAF11Q8TEB1 546 aa36.82■■■■□ 3.48
SRRM2-223ENST00000575701 SLAIN2Q9P270 581 aa36.82■■■■□ 3.48
SRRM2-223ENST00000575701 TECPR2O15040 1411 aa36.82■■■■□ 3.48
SRRM2-223ENST00000575701 ROBO1Q9Y6N7 1651 aa36.81■■■■□ 3.48
SRRM2-223ENST00000575701 DHX57Q6P158 1386 aaKnown RBP36.8■■■■□ 3.48
SRRM2-223ENST00000575701 NALCNQ8IZF0 1738 aa36.8■■■■□ 3.48
SRRM2-223ENST00000575701 ABCC11Q96J66 1382 aa36.78■■■■□ 3.48
SRRM2-223ENST00000575701 YTHDC2Q9H6S0 1430 aaKnown RBP36.76■■■■□ 3.48
SRRM2-223ENST00000575701 CFAP70Q5T0N1 1121 aa36.75■■■■□ 3.47
SRRM2-223ENST00000575701 KDM2AQ9Y2K7 1162 aa36.75■■■■□ 3.47
SRRM2-223ENST00000575701 TMEM132EQ6IEE7 984 aa36.74■■■■□ 3.47
SRRM2-223ENST00000575701 STK26Q9P289 416 aa36.7■■■■□ 3.47
SRRM2-223ENST00000575701 ADGRB1O14514 1584 aa36.67■■■■□ 3.46
SRRM2-223ENST00000575701 SIRT1Q96EB6 747 aa36.67■■■■□ 3.46
SRRM2-223ENST00000575701 MST1RQ04912 1400 aa36.67■■■■□ 3.46
SRRM2-223ENST00000575701 CDC42BPGQ6DT37 1551 aa36.63■■■■□ 3.45
SRRM2-223ENST00000575701 DLC1Q96QB1 1528 aa36.63■■■■□ 3.45
SRRM2-223ENST00000575701 KIAA1210Q9ULL0 1709 aa36.61■■■■□ 3.45
SRRM2-223ENST00000575701 SIN3AQ96ST3 1273 aa36.59■■■■□ 3.45
SRRM2-223ENST00000575701 PHLPP1O60346 1717 aa36.59■■■■□ 3.45
SRRM2-223ENST00000575701 AHDC1Q5TGY3 1603 aaPredicted RBP36.57■■■■□ 3.44
SRRM2-223ENST00000575701 WAPLQ7Z5K2 1190 aa36.57■■■■□ 3.44
SRRM2-223ENST00000575701 PLEKHH1Q9ULM0 1364 aa36.55■■■■□ 3.44
SRRM2-223ENST00000575701 BRINP3Q76B58 766 aa36.55■■■■□ 3.44
SRRM2-223ENST00000575701 C1orf167Q5SNV9 1468 aa36.54■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms