RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 AHDC1Q5TGY3 1603 aaPredicted RBP9.41□□□□□ -0.9
SMG6-219ENST00000575663 SRCAPQ6ZRS2 3230 aa9.4□□□□□ -0.9
SMG6-219ENST00000575663 SHPRHQ149N8 1683 aa9.4□□□□□ -0.9
SMG6-219ENST00000575663 CADPS2Q86UW7 1296 aa9.4□□□□□ -0.9
SMG6-219ENST00000575663 MYOM3Q5VTT5 1437 aa9.39□□□□□ -0.91
SMG6-219ENST00000575663 PPP1R15AO75807 674 aaPredicted RBP9.39□□□□□ -0.91
SMG6-219ENST00000575663 IDI1Q13907 227 aa9.39□□□□□ -0.91
SMG6-219ENST00000575663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMG6-219ENST00000575663 RGS12O14924 1447 aa9.39□□□□□ -0.91
SMG6-219ENST00000575663 PLEKHG1Q9ULL1 1385 aa9.38□□□□□ -0.91
SMG6-219ENST00000575663 AFF2P51816 1311 aa9.38□□□□□ -0.91
SMG6-219ENST00000575663 LMTK2Q8IWU2 1503 aa9.38□□□□□ -0.91
SMG6-219ENST00000575663 ATF3P18847 181 aa9.38□□□□□ -0.91
SMG6-219ENST00000575663 NUTM2BA6NNL0 878 aaPredicted RBP9.37□□□□□ -0.91
SMG6-219ENST00000575663 NUTM2EB1AL46 878 aaPredicted RBP9.37□□□□□ -0.91
SMG6-219ENST00000575663 HDGFP51858 240 aaKnown RBP9.37□□□□□ -0.91
SMG6-219ENST00000575663 NUTM2AQ8IVF1 878 aaPredicted RBP9.37□□□□□ -0.91
SMG6-219ENST00000575663 SLC52A1Q9NWF4 448 aa9.37□□□□□ -0.91
SMG6-219ENST00000575663 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
SMG6-219ENST00000575663 RBM6P78332 1123 aaKnown RBP9.36□□□□□ -0.91
SMG6-219ENST00000575663 NUTM2DQ5VT03 806 aaPredicted RBP9.36□□□□□ -0.91
SMG6-219ENST00000575663 C19orf44Q9H6X5 657 aa9.36□□□□□ -0.91
SMG6-219ENST00000575663 NOS1P29475 1434 aa9.35□□□□□ -0.91
SMG6-219ENST00000575663 DIP2AQ14689 1571 aa9.35□□□□□ -0.91
SMG6-219ENST00000575663 ZRANB1Q9UGI0 708 aa9.35□□□□□ -0.91
SMG6-219ENST00000575663 ZFYVE9O95405 1425 aa9.34□□□□□ -0.91
SMG6-219ENST00000575663 DCCP43146 1447 aa9.34□□□□□ -0.91
SMG6-219ENST00000575663 NGLY1Q96IV0 654 aa9.34□□□□□ -0.91
SMG6-219ENST00000575663 C8orf37Q96NL8 207 aa9.34□□□□□ -0.91
SMG6-219ENST00000575663 RRP7BPQ9NSQ0 103 aa9.34□□□□□ -0.91
SMG6-219ENST00000575663 SETD5Q9C0A6 1442 aa9.33□□□□□ -0.92
SMG6-219ENST00000575663 RIMS2Q9UQ26 1411 aa9.33□□□□□ -0.92
SMG6-219ENST00000575663 ASXL1Q8IXJ9 1541 aa9.33□□□□□ -0.92
SMG6-219ENST00000575663 BRINP3Q76B58 766 aa9.33□□□□□ -0.92
SMG6-219ENST00000575663 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMG6-219ENST00000575663 QTRT2Q9H974 415 aaKnown RBP9.33□□□□□ -0.92
SMG6-219ENST00000575663 TBX22Q9Y458 520 aa9.33□□□□□ -0.92
SMG6-219ENST00000575663 PIK3R4Q99570 1358 aa9.33□□□□□ -0.92
SMG6-219ENST00000575663 RPRD2Q5VT52 1461 aaKnown RBP9.33□□□□□ -0.92
SMG6-219ENST00000575663 CFAP65Q6ZU64 1925 aaKnown RBP9.33□□□□□ -0.92
SMG6-219ENST00000575663 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.31□□□□□ -0.92
SMG6-219ENST00000575663 CHD2O14647 1828 aaKnown RBP9.31□□□□□ -0.92
SMG6-219ENST00000575663 LRRC59Q96AG4 307 aaKnown RBP9.31□□□□□ -0.92
SMG6-219ENST00000575663 ANKRD30AQ9BXX3 1397 aa9.31□□□□□ -0.92
SMG6-219ENST00000575663 CROCC2H7BZ55 1655 aa9.31□□□□□ -0.92
SMG6-219ENST00000575663 ABCC5O15440 1437 aa9.31□□□□□ -0.92
SMG6-219ENST00000575663 TRPM2O94759 1503 aa9.3□□□□□ -0.92
SMG6-219ENST00000575663 DAPK1P53355 1430 aa9.3□□□□□ -0.92
SMG6-219ENST00000575663 PNPLA6Q8IY17 1366 aa9.29□□□□□ -0.92
SMG6-219ENST00000575663 ADAMTS13Q76LX8 1427 aa9.29□□□□□ -0.92
SMG6-219ENST00000575663 TRPC5Q9UL62 973 aaPredicted RBP9.28□□□□□ -0.92
SMG6-219ENST00000575663 MST1RQ04912 1400 aa9.28□□□□□ -0.92
SMG6-219ENST00000575663 VPS8Q8N3P4 1428 aa9.28□□□□□ -0.92
SMG6-219ENST00000575663 SETBP1Q9Y6X0 1596 aa9.28□□□□□ -0.92
SMG6-219ENST00000575663 NHSL1Q5SYE7 1610 aa9.27□□□□□ -0.92
SMG6-219ENST00000575663 CHGAP10645 457 aaKnown RBP9.27□□□□□ -0.93
SMG6-219ENST00000575663 CCDC125Q86Z20 511 aa9.27□□□□□ -0.93
SMG6-219ENST00000575663 AMOTL2Q9Y2J4 779 aa9.27□□□□□ -0.93
SMG6-219ENST00000575663 GCC2Q8IWJ2 1684 aa9.26□□□□□ -0.93
SMG6-219ENST00000575663 ADAMTS2O95450 1211 aa9.26□□□□□ -0.93
SMG6-219ENST00000575663 USP21Q9UK80 565 aa9.26□□□□□ -0.93
SMG6-219ENST00000575663 TMEM131LA2VDJ0 1609 aa9.26□□□□□ -0.93
SMG6-219ENST00000575663 PTPN23Q9H3S7 1636 aa9.26□□□□□ -0.93
SMG6-219ENST00000575663 PTCH1Q13635 1447 aa9.24□□□□□ -0.93
SMG6-219ENST00000575663 KANK4Q5T7N3 995 aaPredicted RBP9.24□□□□□ -0.93
SMG6-219ENST00000575663 CHIC2Q9UKJ5 165 aa9.24□□□□□ -0.93
SMG6-219ENST00000575663 PTPRUQ92729 1446 aa9.23□□□□□ -0.93
SMG6-219ENST00000575663 ADGRL3Q9HAR2 1447 aa9.23□□□□□ -0.93
SMG6-219ENST00000575663 ATRNO75882 1429 aa9.22□□□□□ -0.93
SMG6-219ENST00000575663 ANKRD50Q9ULJ7 1429 aa9.22□□□□□ -0.93
SMG6-219ENST00000575663 ADGRL2O95490 1459 aa9.22□□□□□ -0.93
SMG6-219ENST00000575663 FNBP4Q8N3X1 1017 aaPredicted RBP9.22□□□□□ -0.93
SMG6-219ENST00000575663 DDX17Q92841 729 aaKnown RBP9.22□□□□□ -0.93
SMG6-219ENST00000575663 XRN1Q8IZH2 1706 aaKnown RBP9.22□□□□□ -0.93
SMG6-219ENST00000575663 BLMP54132 1417 aaPredicted RBP9.22□□□□□ -0.93
SMG6-219ENST00000575663 UNC13BO14795 1591 aa9.21□□□□□ -0.93
SMG6-219ENST00000575663 EP400Q96L91 3159 aa9.2□□□□□ -0.94
SMG6-219ENST00000575663 SF3B2Q13435 895 aaKnown RBP9.2□□□□□ -0.94
SMG6-219ENST00000575663 C1orf167Q5SNV9 1468 aa9.2□□□□□ -0.94
SMG6-219ENST00000575663 MYO5BQ9ULV0 1848 aa9.19□□□□□ -0.94
SMG6-219ENST00000575663 LRP5O75197 1615 aa9.19□□□□□ -0.94
SMG6-219ENST00000575663 APLP2Q06481 763 aa9.18□□□□□ -0.94
SMG6-219ENST00000575663 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
SMG6-219ENST00000575663 LAMC1P11047 1609 aa9.17□□□□□ -0.94
SMG6-219ENST00000575663 MYOM2P54296 1465 aa9.17□□□□□ -0.94
SMG6-219ENST00000575663 GJD4Q96KN9 370 aaPredicted RBP9.17□□□□□ -0.94
SMG6-219ENST00000575663 METP08581 1390 aa9.16□□□□□ -0.94
SMG6-219ENST00000575663 NALCNQ8IZF0 1738 aa9.16□□□□□ -0.94
SMG6-219ENST00000575663 IQGAP3Q86VI3 1631 aa9.16□□□□□ -0.94
SMG6-219ENST00000575663 COL22A1Q8NFW1 1626 aaPredicted RBP9.16□□□□□ -0.94
SMG6-219ENST00000575663 NRXN3Q9Y4C0 1643 aa9.16□□□□□ -0.94
SMG6-219ENST00000575663 BCL9LQ86UU0 1499 aa9.15□□□□□ -0.94
SMG6-219ENST00000575663 ZNF326Q5BKZ1 582 aaKnown RBP9.15□□□□□ -0.94
SMG6-219ENST00000575663 E9PCH4 1651 aa9.14□□□□□ -0.95
SMG6-219ENST00000575663 NPHP3Q7Z494 1330 aa9.14□□□□□ -0.95
SMG6-219ENST00000575663 DEFB132Q7Z7B7 95 aa9.14□□□□□ -0.95
SMG6-219ENST00000575663 FAM50AQ14320 339 aaKnown RBP9.13□□□□□ -0.95
SMG6-219ENST00000575663 ORAI2Q96SN7 254 aa9.13□□□□□ -0.95
SMG6-219ENST00000575663 RALGAPBQ86X10 1494 aa9.13□□□□□ -0.95
SMG6-219ENST00000575663 SPHKAPQ2M3C7 1700 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms