RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CHGAP10645 457 aaKnown RBP19.81■□□□□ 0.76
RPAIN-216ENST00000575599 LTKP29376 864 aa19.81■□□□□ 0.76
RPAIN-216ENST00000575599 EID1Q9Y6B2 187 aa19.81■□□□□ 0.76
RPAIN-216ENST00000575599 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
RPAIN-216ENST00000575599 TMEM131LA2VDJ0 1609 aa19.8■□□□□ 0.76
RPAIN-216ENST00000575599 SETD5Q9C0A6 1442 aa19.8■□□□□ 0.76
RPAIN-216ENST00000575599 ILDR1Q86SU0 546 aaPredicted RBP19.77■□□□□ 0.76
RPAIN-216ENST00000575599 TRPM2O94759 1503 aa19.76■□□□□ 0.75
RPAIN-216ENST00000575599 CLTCL1P53675 1640 aa19.75■□□□□ 0.75
RPAIN-216ENST00000575599 RAB3GAP2Q9H2M9 1393 aa19.74■□□□□ 0.75
RPAIN-216ENST00000575599 RIMS2Q9UQ26 1411 aa19.74■□□□□ 0.75
RPAIN-216ENST00000575599 PPP4R3CPQ6ZMV5 832 aa19.73■□□□□ 0.75
RPAIN-216ENST00000575599 FBXO41Q8TF61 875 aa19.73■□□□□ 0.75
RPAIN-216ENST00000575599 ZFYVE9O95405 1425 aa19.73■□□□□ 0.75
RPAIN-216ENST00000575599 PPP1R15AO75807 674 aaPredicted RBP19.71■□□□□ 0.75
RPAIN-216ENST00000575599 RNF216Q9NWF9 866 aaPredicted RBP19.71■□□□□ 0.75
RPAIN-216ENST00000575599 POTEHQ6S545 545 aa19.7■□□□□ 0.74
RPAIN-216ENST00000575599 MPHOSPH9Q99550 1183 aa19.7■□□□□ 0.74
RPAIN-216ENST00000575599 BCANQ96GW7 911 aa19.7■□□□□ 0.74
RPAIN-216ENST00000575599 NUTM2DQ5VT03 806 aaPredicted RBP19.69■□□□□ 0.74
RPAIN-216ENST00000575599 CPS1P31327 1500 aa19.68■□□□□ 0.74
RPAIN-216ENST00000575599 HDGFP51858 240 aaKnown RBP19.68■□□□□ 0.74
RPAIN-216ENST00000575599 ACIN1Q9UKV3 1341 aaKnown RBP19.67■□□□□ 0.74
RPAIN-216ENST00000575599 KIF1BO60333 1816 aa19.67■□□□□ 0.74
RPAIN-216ENST00000575599 ZNF326Q5BKZ1 582 aaKnown RBP19.67■□□□□ 0.74
RPAIN-216ENST00000575599 STRCP1A6NGW2 1772 aa19.66■□□□□ 0.74
RPAIN-216ENST00000575599 IQSEC2Q5JU85 1478 aa19.66■□□□□ 0.74
RPAIN-216ENST00000575599 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.66■□□□□ 0.74
RPAIN-216ENST00000575599 SLC26A8Q96RN1 970 aa19.66■□□□□ 0.74
RPAIN-216ENST00000575599 PLEKHG1Q9ULL1 1385 aa19.66■□□□□ 0.74
RPAIN-216ENST00000575599 CNKSR2Q8WXI2 1034 aa19.64■□□□□ 0.73
RPAIN-216ENST00000575599 CCDC144AA2RUR9 1427 aa19.61■□□□□ 0.73
RPAIN-216ENST00000575599 NEXMIFQ5QGS0 1516 aa19.6■□□□□ 0.73
RPAIN-216ENST00000575599 LRRC7Q96NW7 1537 aa19.58■□□□□ 0.73
RPAIN-216ENST00000575599 ADAMTS13Q76LX8 1427 aa19.56■□□□□ 0.72
RPAIN-216ENST00000575599 DIP2AQ14689 1571 aa19.56■□□□□ 0.72
RPAIN-216ENST00000575599 UBAP1LF5GYI3 381 aa19.56■□□□□ 0.72
RPAIN-216ENST00000575599 NWD1Q149M9 1564 aa19.55■□□□□ 0.72
RPAIN-216ENST00000575599 KCNA6P17658 529 aa19.55■□□□□ 0.72
RPAIN-216ENST00000575599 HRCP23327 699 aa19.55■□□□□ 0.72
RPAIN-216ENST00000575599 NRXN3Q9Y4C0 1643 aa19.54■□□□□ 0.72
RPAIN-216ENST00000575599 SETBP1Q9Y6X0 1596 aa19.54■□□□□ 0.72
RPAIN-216ENST00000575599 TBX22Q9Y458 520 aa19.54■□□□□ 0.72
RPAIN-216ENST00000575599 PPLO60437 1756 aa19.52■□□□□ 0.72
RPAIN-216ENST00000575599 CHD2O14647 1828 aaKnown RBP19.52■□□□□ 0.72
RPAIN-216ENST00000575599 NKTRP30414 1462 aaKnown RBP19.52■□□□□ 0.71
RPAIN-216ENST00000575599 RGL3Q3MIN7 710 aa19.51■□□□□ 0.71
RPAIN-216ENST00000575599 XIRP1Q702N8 1843 aaKnown RBP19.51■□□□□ 0.71
RPAIN-216ENST00000575599 SPATA31E1Q6ZUB1 1445 aa19.51■□□□□ 0.71
RPAIN-216ENST00000575599 RPGRIP1LQ68CZ1 1315 aa19.51■□□□□ 0.71
RPAIN-216ENST00000575599 TMEM94Q12767 1356 aa19.49■□□□□ 0.71
RPAIN-216ENST00000575599 VGFO15240 615 aaPredicted RBP19.49■□□□□ 0.71
RPAIN-216ENST00000575599 PROSER2Q86WR7 435 aaPredicted RBP19.49■□□□□ 0.71
RPAIN-216ENST00000575599 RBM33Q96EV2 1170 aaKnown RBP19.49■□□□□ 0.71
RPAIN-216ENST00000575599 PIK3R4Q99570 1358 aa19.48■□□□□ 0.71
RPAIN-216ENST00000575599 TOM1O60784 492 aa19.47■□□□□ 0.71
RPAIN-216ENST00000575599 ANKRD30BQ9BXX2 1392 aa19.47■□□□□ 0.71
RPAIN-216ENST00000575599 PIP4K2BP78356 416 aa19.46■□□□□ 0.71
RPAIN-216ENST00000575599 IFT172Q9UG01 1749 aa19.46■□□□□ 0.71
RPAIN-216ENST00000575599 METP08581 1390 aa19.45■□□□□ 0.7
RPAIN-216ENST00000575599 PTPRUQ92729 1446 aa19.45■□□□□ 0.7
RPAIN-216ENST00000575599 TRIM26Q12899 539 aaPredicted RBP19.44■□□□□ 0.7
RPAIN-216ENST00000575599 ALKQ9UM73 1620 aa19.44■□□□□ 0.7
RPAIN-216ENST00000575599 AMOTL2Q9Y2J4 779 aa19.44■□□□□ 0.7
RPAIN-216ENST00000575599 SETD1AO15047 1707 aaKnown RBP19.42■□□□□ 0.7
RPAIN-216ENST00000575599 XRN1Q8IZH2 1706 aaKnown RBP19.42■□□□□ 0.7
RPAIN-216ENST00000575599 ADGRF5Q8IZF2 1346 aa19.42■□□□□ 0.7
RPAIN-216ENST00000575599 C14orf37Q86TY3 774 aa19.4■□□□□ 0.7
RPAIN-216ENST00000575599 MSH6P52701 1360 aa19.39■□□□□ 0.69
RPAIN-216ENST00000575599 PIK3C2GO75747 1445 aa19.36■□□□□ 0.69
RPAIN-216ENST00000575599 MYOM2P54296 1465 aa19.36■□□□□ 0.69
RPAIN-216ENST00000575599 NCOA3Q9Y6Q9 1424 aa19.34■□□□□ 0.69
RPAIN-216ENST00000575599 NRXN1Q9ULB1 1477 aa19.32■□□□□ 0.68
RPAIN-216ENST00000575599 HSPA1LP34931 641 aa19.32■□□□□ 0.68
RPAIN-216ENST00000575599 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.31■□□□□ 0.68
RPAIN-216ENST00000575599 PTCH1Q13635 1447 aa19.31■□□□□ 0.68
RPAIN-216ENST00000575599 PCGF6Q9BYE7 350 aa19.31■□□□□ 0.68
RPAIN-216ENST00000575599 ASXL1Q8IXJ9 1541 aa19.3■□□□□ 0.68
RPAIN-216ENST00000575599 DCAF11Q8TEB1 546 aa19.3■□□□□ 0.68
RPAIN-216ENST00000575599 KDM2AQ9Y2K7 1162 aa19.3■□□□□ 0.68
RPAIN-216ENST00000575599 ROBO2Q9HCK4 1378 aa19.29■□□□□ 0.68
RPAIN-216ENST00000575599 LAMC1P11047 1609 aa19.29■□□□□ 0.68
RPAIN-216ENST00000575599 TMEM132EQ6IEE7 984 aa19.29■□□□□ 0.68
RPAIN-216ENST00000575599 C19orf44Q9H6X5 657 aa19.29■□□□□ 0.68
RPAIN-216ENST00000575599 ROBO1Q9Y6N7 1651 aa19.28■□□□□ 0.68
RPAIN-216ENST00000575599 NALCNQ8IZF0 1738 aa19.28■□□□□ 0.68
RPAIN-216ENST00000575599 ATF3P18847 181 aa19.28■□□□□ 0.68
RPAIN-216ENST00000575599 STK26Q9P289 416 aa19.28■□□□□ 0.68
RPAIN-216ENST00000575599 DHX57Q6P158 1386 aaKnown RBP19.27■□□□□ 0.68
RPAIN-216ENST00000575599 CFAP70Q5T0N1 1121 aa19.27■□□□□ 0.68
RPAIN-216ENST00000575599 PRAG1Q86YV5 1406 aa19.26■□□□□ 0.67
RPAIN-216ENST00000575599 ADGRL3Q9HAR2 1447 aa19.26■□□□□ 0.67
RPAIN-216ENST00000575599 CADPS2Q86UW7 1296 aa19.26■□□□□ 0.67
RPAIN-216ENST00000575599 C14orf93Q9H972 538 aaKnown RBP19.26■□□□□ 0.67
RPAIN-216ENST00000575599 SLAIN2Q9P270 581 aa19.26■□□□□ 0.67
RPAIN-216ENST00000575599 FAM135BQ49AJ0 1406 aa19.26■□□□□ 0.67
RPAIN-216ENST00000575599 LRPPRCP42704 1394 aaKnown RBP19.25■□□□□ 0.67
RPAIN-216ENST00000575599 DCCP43146 1447 aa19.25■□□□□ 0.67
RPAIN-216ENST00000575599 KNDC1Q76NI1 1749 aa19.25■□□□□ 0.67
RPAIN-216ENST00000575599 YTHDC2Q9H6S0 1430 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms